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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8053H07.3
        

               
Conread position:
               
819-1112
               

               
Cow position:
               
chr3:41550178-41550474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
828-1176
               

               
Cow position:
               
chr3:67744436-67744788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
834-1140
               

               
Cow position:
               
chr3:15221335-15221647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
839-1173
               

               
Cow position:
               
chr3:37485621-37485940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
840-1176
               

               
Cow position:
               
chr3:74234377-74234031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
80, 224
               

               
Conread position:
               
842-1173
               

               
Cow position:
               
chr3:83491276-83490921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 241
               

               
Conread position:
               
843-1176
               

               
Cow position:
               
chr3:15051760-15052117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
845-1169
               

               
Cow position:
               
chr3:15057450-15057765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
847-1171
               

               
Cow position:
               
chr3:5365853-5365511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
847-1176
               

               
Cow position:
               
chr3:54881945-54881590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
848-1072
               

               
Cow position:
               
chr3:71423382-71423609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
848-1175
               

               
Cow position:
               
chr3:13329604-13329942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
849-1163
               

               
Cow position:
               
chr3:46541663-46541980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
849-1173
               

               
Cow position:
               
chr3:4050368-4050030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
849-1173
               

               
Cow position:
               
chr3:23111345-23111661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
850-1043
               

               
Cow position:
               
chr3:65771168-65771361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
850-1166
               

               
Cow position:
               
chr3:48629426-48629749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
850-1171
               

               
Cow position:
               
chr3:48241795-48241456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
850-1172
               

               
Cow position:
               
chr3:61323004-61322684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
850-1173
               

               
Cow position:
               
chr3:13577030-13577348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr3:23471277-23471629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
42, 290
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr3:29813411-29813079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr3:34669577-34669893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr3:38347346-38347037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr3:50281585-50281923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
851-1071
               

               
Cow position:
               
chr3:69650712-69650947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
851-1099
               

               
Cow position:
               
chr3:40100544-40100795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 216
               

               
Conread position:
               
851-1165
               

               
Cow position:
               
chr3:75480183-75479848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
46, 160
               

               
Conread position:
               
851-1172
               

               
Cow position:
               
chr3:29596559-29596230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
851-1173
               

               
Cow position:
               
chr3:20841694-20842018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 228
               

               
Conread position:
               
851-1173
               

               
Cow position:
               
chr3:56637818-56637508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:9641740-9641400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:11063527-11063217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:26982234-26981899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:27532495-27532823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:28908032-28908367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:29507747-29507431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:30463012-30463331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:63316291-63315970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:65058884-65058537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 203
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr3:65969338-65968993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
852-1172
               

               
Cow position:
               
chr3:48363253-48362924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
46, 170
               

               
Conread position:
               
852-1173
               

               
Cow position:
               
chr3:29359980-29360302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
852-1176
               

               
Cow position:
               
chr3:36100996-36100667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
852-1176
               

               
Cow position:
               
chr3:36204712-36204389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
852-1176
               

               
Cow position:
               
chr3:53046495-53046824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
852-1176
               

               
Cow position:
               
chr3:62884362-62884041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
853-1040
               

               
Cow position:
               
chr3:22092309-22092122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
853-1163
               

               
Cow position:
               
chr3:9074181-9074495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
853-1176
               

               
Cow position:
               
chr3:26066170-26065838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 159
               

               
Conread position:
               
853-1176
               

               
Cow position:
               
chr3:75080936-75080605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
854-1009
               

               
Cow position:
               
chr3:62798625-62798780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
854-1078
               

               
Cow position:
               
chr3:5601006-5601230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
854-1101
               

               
Cow position:
               
chr3:39873527-39873786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
854-1113
               

               
Cow position:
               
chr3:28238423-28238672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
854-1150
               

               
Cow position:
               
chr3:60389935-60389628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 220
               

               
Conread position:
               
854-1173
               

               
Cow position:
               
chr3:8924203-8923885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr3:38864300-38863950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr3:51233922-51234262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 178
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr3:54506888-54506544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
44, 286
               

               
Conread position:
               
855-1148
               

               
Cow position:
               
chr3:61116691-61116995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
855-1167
               

               
Cow position:
               
chr3:61894002-61894326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
855-1170
               

               
Cow position:
               
chr3:5374490-5374175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
855-1170
               

               
Cow position:
               
chr3:79093880-79094207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
855-1173
               

               
Cow position:
               
chr3:18216614-18216926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
855-1173
               

               
Cow position:
               
chr3:58764905-58765239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 311
               

               
Conread position:
               
855-1176
               

               
Cow position:
               
chr3:48072705-48073039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 233
               

               
Conread position:
               
855-1176
               

               
Cow position:
               
chr3:50768860-50768517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 249
               

               
Conread position:
               
855-1176
               

               
Cow position:
               
chr3:64536407-64536712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
856-1015
               

               
Cow position:
               
chr3:68085953-68086111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
856-1033
               

               
Cow position:
               
chr3:10173002-10173187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
856-1037
               

               
Cow position:
               
chr3:27246787-27246983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
856-1042
               

               
Cow position:
               
chr3:26740878-26741058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
856-1052
               

               
Cow position:
               
chr3:25076005-25076205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
856-1052
               

               
Cow position:
               
chr3:57846771-57846969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
856-1063
               

               
Cow position:
               
chr3:51349978-51349773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
856-1070
               

               
Cow position:
               
chr3:11229190-11229422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
856-1072
               

               
Cow position:
               
chr3:63449164-63448955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
856-1073
               

               
Cow position:
               
chr3:30357689-30357463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
856-1108
               

               
Cow position:
               
chr3:26088835-26089099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
856-1139
               

               
Cow position:
               
chr3:54739720-54740017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
856-1153
               

               
Cow position:
               
chr3:75050443-75050761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 152
               

               
Conread position:
               
856-1161
               

               
Cow position:
               
chr3:3985497-3985177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 175
               

               
Conread position:
               
856-1163
               

               
Cow position:
               
chr3:59474300-59473968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
856-1163
               

               
Cow position:
               
chr3:70333789-70334117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 204
               

               
Conread position:
               
856-1168
               

               
Cow position:
               
chr3:64172602-64172288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
856-1170
               

               
Cow position:
               
chr3:59333939-59333612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
856-1172
               

               
Cow position:
               
chr3:59101971-59101667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
229, 42
               

               
Conread position:
               
856-1172
               

               
Cow position:
               
chr3:59597353-59597022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 206
               

               
Conread position:
               
856-1172
               

               
Cow position:
               
chr3:71247194-71246864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr3:18725483-18725797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr3:37186988-37186668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:525507-525185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:2199046-2198717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:15654989-15655313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:25477972-25477651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:26904280-26903950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 158
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:48253059-48252718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:54946301-54945963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:58175061-58174739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:64280758-64281097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 225
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:68342098-68342419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:68587199-68586856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr3:73764035-73764361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
858-1061
               

               
Cow position:
               
chr3:909471-909681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
858-1169
               

               
Cow position:
               
chr3:20993973-20993653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
858-1173
               

               
Cow position:
               
chr3:50614801-50614475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
858-1176
               

               
Cow position:
               
chr3:17936669-17937000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 274
               

               
Conread position:
               
859-1036
               

               
Cow position:
               
chr3:6901073-6900892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
859-1055
               

               
Cow position:
               
chr3:54905783-54905576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 163
               

               
Conread position:
               
859-1063
               

               
Cow position:
               
chr3:53904612-53904407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
859-1108
               

               
Cow position:
               
chr3:75777892-75778157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 221
               

               
Conread position:
               
859-1143
               

               
Cow position:
               
chr3:73237360-73237062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
859-1163
               

               
Cow position:
               
chr3:45648281-45647980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
859-1164
               

               
Cow position:
               
chr3:51492942-51492628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
859-1166
               

               
Cow position:
               
chr3:8752943-8752629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
859-1169
               

               
Cow position:
               
chr3:15153865-15153534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 277
               

               
Conread position:
               
859-1169
               

               
Cow position:
               
chr3:58131149-58130846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
859-1170
               

               
Cow position:
               
chr3:73741710-73742014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
859-1172
               

               
Cow position:
               
chr3:18687078-18686746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 221
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr3:19793074-19792730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr3:24872869-24872553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:8061297-8060962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 160
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:8393516-8393185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:12255630-12255313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:23091820-23092144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:53588230-53588552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:54340264-54340575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:54435145-54434810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 181
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:57764390-57764062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr3:73467803-73467457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 298
               

               
Conread position:
               
860-1127
               

               
Cow position:
               
chr3:3649063-3649334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 175
               

               
Conread position:
               
860-1127
               

               
Cow position:
               
chr3:58527553-58527281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
860-1132
               

               
Cow position:
               
chr3:18213981-18214260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
860-1152
               

               
Cow position:
               
chr3:32610420-32610109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
860-1167
               

               
Cow position:
               
chr3:3036765-3037088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
860-1171
               

               
Cow position:
               
chr3:58973452-58973143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
860-1172
               

               
Cow position:
               
chr3:15228665-15228986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr3:4035932-4036239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr3:18459361-18459684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
35, 204
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr3:24353016-24352698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr3:14465539-14465872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 304
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr3:18393224-18393553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 161
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr3:39969687-39970033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr3:42480771-42480456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr3:74754491-74754163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 192
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr3:75853159-75853496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 161
               

               
Conread position:
               
861-1076
               

               
Cow position:
               
chr3:29827992-29828211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
861-1151
               

               
Cow position:
               
chr3:74584365-74584077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
861-1163
               

               
Cow position:
               
chr3:23408189-23408504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
861-1163
               

               
Cow position:
               
chr3:55177576-55177905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr3:22232493-22232817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr3:29887265-29887587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr3:56476849-56476515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr3:68707847-68708169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 164
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr3:68880956-68881277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr3:73915654-73915969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
862-1113
               

               
Cow position:
               
chr3:64135871-64135614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
862-1172
               

               
Cow position:
               
chr3:35153780-35153460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
37, 258
               

               
Conread position:
               
862-1172
               

               
Cow position:
               
chr3:74611719-74611404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
862-1173
               

               
Cow position:
               
chr3:54771155-54770847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
863-1172
               

               
Cow position:
               
chr3:65237196-65236862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 224
               

               
Conread position:
               
863-1176
               

               
Cow position:
               
chr3:76922500-76922828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
38, 190
               

               
Conread position:
               
864-1176
               

               
Cow position:
               
chr3:26835675-26835961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
865-1147
               

               
Cow position:
               
chr3:74846554-74846847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
865-1176
               

               
Cow position:
               
chr3:54862269-54862584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
866-1130
               

               
Cow position:
               
chr3:73299235-73298967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 146
               

               
Conread position:
               
867-1111
               

               
Cow position:
               
chr3:56483670-56483415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
867-1136
               

               
Cow position:
               
chr3:14505764-14506042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
867-1173
               

               
Cow position:
               
chr3:8394081-8393774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
867-1173
               

               
Cow position:
               
chr3:60597706-60597380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 154
               

               
Conread position:
               
867-1176
               

               
Cow position:
               
chr3:55373416-55373736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
867-1176
               

               
Cow position:
               
chr3:70896208-70895885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
31, 220
               

               
Conread position:
               
867-1176
               

               
Cow position:
               
chr3:74533503-74533187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
31, 202
               

               
Conread position:
               
867-1176
               

               
Cow position:
               
chr3:80818851-80818563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
869-1176
               

               
Cow position:
               
chr3:72587-72249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 214
               

               
Conread position:
               
869-1176
               

               
Cow position:
               
chr3:55124118-55124443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 266
               

               
Conread position:
               
872-1176
               

               
Cow position:
               
chr3:3736445-3736123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
872-1176
               

               
Cow position:
               
chr3:59000599-59000913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
872-1176
               

               
Cow position:
               
chr3:68145691-68146008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
872-1176
               

               
Cow position:
               
chr3:70565594-70565903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
873-1176
               

               
Cow position:
               
chr3:74205664-74205975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
874-1176
               

               
Cow position:
               
chr3:11712103-11711792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
875-1176
               

               
Cow position:
               
chr3:45647827-45647515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 256
               

               
Conread position:
               
877-1140
               

               
Cow position:
               
chr3:53091619-53091360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
877-1173
               

               
Cow position:
               
chr3:75045736-75046040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
878-1176
               

               
Cow position:
               
chr3:75158491-75158194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
204, 32
               

               
Conread position:
               
884-1068
               

               
Cow position:
               
chr3:5040176-5040362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
884-1152
               

               
Cow position:
               
chr3:48900203-48900479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
884-1160
               

               
Cow position:
               
chr3:79196890-79196610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
884-1167
               

               
Cow position:
               
chr3:63179987-63179704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
884-1168
               

               
Cow position:
               
chr3:24468255-24468536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
884-1168
               

               
Cow position:
               
chr3:72391215-72390925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
884-1172
               

               
Cow position:
               
chr3:15159161-15158880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
884-1173
               

               
Cow position:
               
chr3:210449-210154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
884-1173
               

               
Cow position:
               
chr3:31309224-31309517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr3:52608308-52608022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr3:66900599-66900907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 185
               

               
Conread position:
               
885-1111
               

               
Cow position:
               
chr3:19626381-19626608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
183, 24
               

               
Conread position:
               
887-1173
               

               
Cow position:
               
chr3:27696850-27697141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
888-1176
               

               
Cow position:
               
chr3:33327836-33327539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
890-1176
               

               
Cow position:
               
chr3:26553598-26553881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
892-1170
               

               
Cow position:
               
chr3:79645308-79645603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr3:2025322-2025019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr3:2506357-2506642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
894-1075
               

               
Cow position:
               
chr3:11716119-11715936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
894-1113
               

               
Cow position:
               
chr3:35873854-35874068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
189, 10
               

               
Conread position:
               
894-1170
               

               
Cow position:
               
chr3:84199802-84199520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
894-1173
               

               
Cow position:
               
chr3:8457774-8457497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
894-1176
               

               
Cow position:
               
chr3:18458547-18458821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
190, 30
               

               
Conread position:
               
894-1176
               

               
Cow position:
               
chr3:83846033-83845739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
895-1072
               

               
Cow position:
               
chr3:23667739-23667561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
899-1173
               

               
Cow position:
               
chr3:23477105-23476839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
899-1176
               

               
Cow position:
               
chr3:58285794-58286063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
902-1152
               

               
Cow position:
               
chr3:74500362-74500097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
904-1176
               

               
Cow position:
               
chr3:53739066-53739351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
912-1176
               

               
Cow position:
               
chr3:27785368-27785113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
919-1163
               

               
Cow position:
               
chr3:25755118-25754874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
923-1168
               

               
Cow position:
               
chr3:4319805-4319557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
924-1074
               

               
Cow position:
               
chr3:2638019-2637865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
924-1146
               

               
Cow position:
               
chr3:37599336-37599561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
924-1152
               

               
Cow position:
               
chr3:51033458-51033229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
924-1152
               

               
Cow position:
               
chr3:73820278-73820511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
924-1162
               

               
Cow position:
               
chr3:62789083-62789331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
924-1163
               

               
Cow position:
               
chr3:63269315-63269071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
924-1169
               

               
Cow position:
               
chr3:61144187-61143942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
924-1172
               

               
Cow position:
               
chr3:53240349-53240105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr3:17222047-17222309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr3:26874683-26874425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr3:31771778-31771531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr3:55970599-55970340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr3:67930093-67930347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr3:78077282-78077028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
925-1071
               

               
Cow position:
               
chr3:20515726-20515878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1078
               

               
Cow position:
               
chr3:21997696-21997851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
925-1078
               

               
Cow position:
               
chr3:81234481-81234323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1081
               

               
Cow position:
               
chr3:27976432-27976592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1081
               

               
Cow position:
               
chr3:56704229-56704386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
925-1101
               

               
Cow position:
               
chr3:53703872-53704055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
925-1109
               

               
Cow position:
               
chr3:75238549-75238361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 140
               

               
Conread position:
               
925-1111
               

               
Cow position:
               
chr3:55984190-55983996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
925-1138
               

               
Cow position:
               
chr3:56678258-56678481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
925-1144
               

               
Cow position:
               
chr3:7661944-7661719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
925-1149
               

               
Cow position:
               
chr3:17058454-17058678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
925-1149
               

               
Cow position:
               
chr3:72503804-72504038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 213
               

               
Conread position:
               
925-1150
               

               
Cow position:
               
chr3:3656607-3656371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
925-1151
               

               
Cow position:
               
chr3:59621556-59621785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
925-1153
               

               
Cow position:
               
chr3:21081294-21081516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
925-1157
               

               
Cow position:
               
chr3:34871657-34871422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 191
               

               
Conread position:
               
925-1159
               

               
Cow position:
               
chr3:61323423-61323185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
925-1163
               

               
Cow position:
               
chr3:19793499-19793745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
925-1166
               

               
Cow position:
               
chr3:24935456-24935215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
925-1167
               

               
Cow position:
               
chr3:59691980-59691742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
925-1167
               

               
Cow position:
               
chr3:70899982-70899739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
925-1168
               

               
Cow position:
               
chr3:76267883-76268139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
925-1170
               

               
Cow position:
               
chr3:82019747-82019999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 204
               

               
Conread position:
               
925-1170
               

               
Cow position:
               
chr3:83474837-83474587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
925-1171
               

               
Cow position:
               
chr3:74243084-74242835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr3:53508703-53508460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 134
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr3:60264624-60264876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 229
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:18067224-18066973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:20677750-20677997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:26218961-26219212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:27274620-27274369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:30940898-30940653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:55835728-55835987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 155
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:57760590-57760336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:73443004-73443249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
190, 77
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr3:73709138-73708886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:3738573-3738323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:7337692-7337935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:12711823-12712084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:13507560-13507301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:14552967-14552713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:14601612-14601878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:27108796-27109066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:27940051-27940293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:32585242-32584988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:44932605-44932347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:45211393-45211132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
38, 199
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:45881990-45881744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 154
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:53150423-53150164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:53384188-53384449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:55271953-55272210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
43, 249
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:56059903-56059641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:57624556-57624298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
43, 163
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:58540430-58540694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:59208886-59208649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:59451696-59451423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:60265162-60265407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:67704638-67704377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:68616238-68616490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:70762031-70762288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:71238245-71237991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:74134796-74134540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 147
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:78945747-78945998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:81471004-81471266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr3:83215354-83215088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
926-1075
               

               
Cow position:
               
chr3:11292157-11292308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 136
               

               
Conread position:
               
926-1081
               

               
Cow position:
               
chr3:61467099-61467258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
926-1102
               

               
Cow position:
               
chr3:69785532-69785716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
926-1107
               

               
Cow position:
               
chr3:49363200-49363020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 152
               

               
Conread position:
               
926-1130
               

               
Cow position:
               
chr3:10104131-10103928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
926-1150
               

               
Cow position:
               
chr3:37041510-37041275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
926-1168
               

               
Cow position:
               
chr3:19585954-19585704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
926-1169
               

               
Cow position:
               
chr3:77582197-77581950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
926-1171
               

               
Cow position:
               
chr3:62826527-62826779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
926-1173
               

               
Cow position:
               
chr3:38691315-38691571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 142
               

               
Conread position:
               
926-1173
               

               
Cow position:
               
chr3:48810556-48810799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
926-1173
               

               
Cow position:
               
chr3:77271187-77271435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr3:23105271-23105531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr3:51578235-51578485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr3:65413188-65413445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr3:68627598-68627846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr3:80053452-80053709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
927-1154
               

               
Cow position:
               
chr3:1785155-1785385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
927-1163
               

               
Cow position:
               
chr3:54100636-54100874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
927-1171
               

               
Cow position:
               
chr3:74601204-74600951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
927-1173
               

               
Cow position:
               
chr3:51255869-51255625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:26493141-26493387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:46901287-46901031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:52651990-52652240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:53318490-53318238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:53875676-53875924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:55318809-55319068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:55819840-55819582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
149, 39
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:66707977-66708237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:66883855-66884106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:70609716-70609461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr3:80072219-80071961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
928-1100
               

               
Cow position:
               
chr3:74900554-74900726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 135
               

               
Conread position:
               
928-1105
               

               
Cow position:
               
chr3:14547089-14546909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
928-1110
               

               
Cow position:
               
chr3:47753314-47753126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
928-1121
               

               
Cow position:
               
chr3:27727742-27727940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
928-1144
               

               
Cow position:
               
chr3:18059792-18059568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
928-1149
               

               
Cow position:
               
chr3:32457282-32457062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
928-1150
               

               
Cow position:
               
chr3:17235128-17235348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
928-1151
               

               
Cow position:
               
chr3:78093300-78093524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 151
               

               
Conread position:
               
928-1152
               

               
Cow position:
               
chr3:15443640-15443870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
928-1166
               

               
Cow position:
               
chr3:73395205-73394965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
928-1168
               

               
Cow position:
               
chr3:17134423-17134180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
928-1170
               

               
Cow position:
               
chr3:9663083-9663331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
928-1172
               

               
Cow position:
               
chr3:59610629-59610882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr3:12705455-12705708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr3:15506537-15506289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr3:58767352-58767107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 191
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr3:59883980-59884235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr3:71497049-71497306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 143
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr3:80581744-80581501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr3:2216457-2216198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr3:17447526-17447773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr3:23168977-23169231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr3:26960499-26960756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr3:30222280-30222020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr3:49790723-49790976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr3:70401985-70401737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr3:80565055-80564798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
929-1072
               

               
Cow position:
               
chr3:57877654-57877507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
929-1111
               

               
Cow position:
               
chr3:45897687-45897507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
929-1111
               

               
Cow position:
               
chr3:45972369-45972549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
929-1127
               

               
Cow position:
               
chr3:58317859-58318070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
929-1163
               

               
Cow position:
               
chr3:2648422-2648666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
929-1165
               

               
Cow position:
               
chr3:22221415-22221165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
929-1165
               

               
Cow position:
               
chr3:23920342-23920584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
929-1168
               

               
Cow position:
               
chr3:66292088-66292334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
929-1172
               

               
Cow position:
               
chr3:53222101-53221853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
929-1173
               

               
Cow position:
               
chr3:49383037-49382786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
929-1173
               

               
Cow position:
               
chr3:77365201-77365461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr3:1830488-1830734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr3:49650476-49650220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr3:78092424-78092671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 184
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr3:84596877-84597125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
930-1173
               

               
Cow position:
               
chr3:17934851-17935096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
930-1176
               

               
Cow position:
               
chr3:17895935-17895681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
930-1176
               

               
Cow position:
               
chr3:54781917-54782182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
930-1176
               

               
Cow position:
               
chr3:75687351-75687604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
931-1073
               

               
Cow position:
               
chr3:11606406-11606253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
931-1152
               

               
Cow position:
               
chr3:71238554-71238332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
931-1176
               

               
Cow position:
               
chr3:5097293-5097038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
931-1176
               

               
Cow position:
               
chr3:62046750-62046497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
932-1173
               

               
Cow position:
               
chr3:72676176-72675930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
933-1168
               

               
Cow position:
               
chr3:8733275-8733513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
933-1173
               

               
Cow position:
               
chr3:59630429-59630664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
933-1173
               

               
Cow position:
               
chr3:64010731-64010979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr3:53113259-53113008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr3:57274145-57273901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
934-1173
               

               
Cow position:
               
chr3:23877083-23876832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
934-1173
               

               
Cow position:
               
chr3:74502242-74502484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
934-1173
               

               
Cow position:
               
chr3:76387526-76387761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
934-1176
               

               
Cow position:
               
chr3:55778116-55777872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
934-1176
               

               
Cow position:
               
chr3:75570370-75570613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
935-1152
               

               
Cow position:
               
chr3:1517430-1517655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 134
               

               
Conread position:
               
935-1176
               

               
Cow position:
               
chr3:5100690-5100932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
935-1176
               

               
Cow position:
               
chr3:35852389-35852629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
935-1176
               

               
Cow position:
               
chr3:70334613-70334869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
936-1111
               

               
Cow position:
               
chr3:65019784-65019964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
936-1170
               

               
Cow position:
               
chr3:53790455-53790696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr3:55109532-55109780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr3:59799329-59799082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
937-1173
               

               
Cow position:
               
chr3:79292908-79292667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
937-1174
               

               
Cow position:
               
chr3:14632908-14633147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
937-1176
               

               
Cow position:
               
chr3:31850297-31850535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
937-1176
               

               
Cow position:
               
chr3:61840355-61840112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
937-1176
               

               
Cow position:
               
chr3:81371729-81371482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
938-1173
               

               
Cow position:
               
chr3:55189674-55189918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
938-1176
               

               
Cow position:
               
chr3:27545740-27546000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
939-1173
               

               
Cow position:
               
chr3:15684844-15685076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 183
               

               
Conread position:
               
939-1176
               

               
Cow position:
               
chr3:44861234-44861469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
940-1176
               

               
Cow position:
               
chr3:10896899-10896667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 130
               

               
Conread position:
               
941-1176
               

               
Cow position:
               
chr3:3638254-3638021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
942-1112
               

               
Cow position:
               
chr3:3472115-3471938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
942-1112
               

               
Cow position:
               
chr3:81277393-81277571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
942-1173
               

               
Cow position:
               
chr3:26920985-26920746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
942-1173
               

               
Cow position:
               
chr3:50069838-50069602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
942-1173
               

               
Cow position:
               
chr3:58968828-58969063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
942-1173
               

               
Cow position:
               
chr3:76015367-76015128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
942-1176
               

               
Cow position:
               
chr3:56302-56540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
942-1176
               

               
Cow position:
               
chr3:68582925-68583168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
943-1173
               

               
Cow position:
               
chr3:12674969-12675197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
943-1176
               

               
Cow position:
               
chr3:7940483-7940721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
944-1176
               

               
Cow position:
               
chr3:75711379-75711146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
946-1176
               

               
Cow position:
               
chr3:23444817-23445059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
947-1152
               

               
Cow position:
               
chr3:80468608-80468816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
952-1173
               

               
Cow position:
               
chr3:78896712-78896487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
954-1176
               

               
Cow position:
               
chr3:73759454-73759681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
966-1167
               

               
Cow position:
               
chr3:54373813-54374016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
966-1176
               

               
Cow position:
               
chr3:49140002-49140207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
118, 34
               

               
Conread position:
               
967-1152
               

               
Cow position:
               
chr3:59040615-59040426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
967-1166
               

               
Cow position:
               
chr3:79270911-79271114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
967-1167
               

               
Cow position:
               
chr3:57577743-57577539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
967-1173
               

               
Cow position:
               
chr3:15388265-15388053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
967-1173
               

               
Cow position:
               
chr3:43233552-43233345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
967-1173
               

               
Cow position:
               
chr3:69144739-69144543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
150, 97
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr3:52863138-52863350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr3:72019162-72018950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr3:74878543-74878757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
115, 99
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr3:81359061-81359278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 95
               

               
Conread position:
               
968-1123
               

               
Cow position:
               
chr3:12670570-12670726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
968-1172
               

               
Cow position:
               
chr3:34937889-34937682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
968-1173
               

               
Cow position:
               
chr3:31046907-31047113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr3:20437611-20437815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
149, 98
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr3:34294223-34294450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr3:39171441-39171648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr3:66609799-66610008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
969-1173
               

               
Cow position:
               
chr3:10347395-10347193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
969-1176
               

               
Cow position:
               
chr3:65800629-65800430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
969-1176
               

               
Cow position:
               
chr3:83921228-83921037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
970-1171
               

               
Cow position:
               
chr3:46350714-46350503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
970-1173
               

               
Cow position:
               
chr3:22820614-22820406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
970-1174
               

               
Cow position:
               
chr3:19708065-19708268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
971-1172
               

               
Cow position:
               
chr3:18498058-18497857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
971-1172
               

               
Cow position:
               
chr3:57754434-57754641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 124
               

               
Conread position:
               
971-1173
               

               
Cow position:
               
chr3:49460884-49461095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
971-1176
               

               
Cow position:
               
chr3:53094889-53095101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
972-1173
               

               
Cow position:
               
chr3:34741913-34741705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
972-1176
               

               
Cow position:
               
chr3:33698772-33698560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 104
               

               
Conread position:
               
973-1156
               

               
Cow position:
               
chr3:15954045-15954232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1156
               

               
Cow position:
               
chr3:43727119-43726931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
110, 158
               

               
Conread position:
               
973-1160
               

               
Cow position:
               
chr3:24548797-24548995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 181
               

               
Conread position:
               
973-1162
               

               
Cow position:
               
chr3:81507071-81507263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 104
               

               
Conread position:
               
973-1168
               

               
Cow position:
               
chr3:67929220-67929421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr3:188912-188699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr3:18185115-18184909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr3:21547060-21547259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr3:25945133-25944920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr3:31206916-31206711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr3:79220898-79220689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 78
               

               
Conread position:
               
973-1173
               

               
Cow position:
               
chr3:11987369-11987165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr3:61171467-61171676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
8, 102
               

               
Conread position:
               
974-1167
               

               
Cow position:
               
chr3:32183979-32184177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
977-1172
               

               
Cow position:
               
chr3:36446682-36446878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
977-1173
               

               
Cow position:
               
chr3:15992755-15992552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
978-1172
               

               
Cow position:
               
chr3:17957502-17957301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
980-1152
               

               
Cow position:
               
chr3:80953680-80953505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
980-1173
               

               
Cow position:
               
chr3:35005809-35005618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
983-1173
               

               
Cow position:
               
chr3:31907113-31907303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
985-1176
               

               
Cow position:
               
chr3:70632049-70631853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
987-1176
               

               
Cow position:
               
chr3:22907702-22907883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
988-1176
               

               
Cow position:
               
chr3:81277673-81277864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 88
               

               
Conread position:
               
990-1176
               

               
Cow position:
               
chr3:5850906-5851089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
991-1160
               

               
Cow position:
               
chr3:5416198-5416369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
991-1176
               

               
Cow position:
               
chr3:78647528-78647339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
992-1176
               

               
Cow position:
               
chr3:66866380-66866565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
993-1173
               

               
Cow position:
               
chr3:39328420-39328232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
994-1176
               

               
Cow position:
               
chr3:66375339-66375151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
995-1168
               

               
Cow position:
               
chr3:14625372-14625549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
995-1173
               

               
Cow position:
               
chr3:55106422-55106601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
997-1176
               

               
Cow position:
               
chr3:52650511-52650696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1003-1173
               

               
Cow position:
               
chr3:80081803-80081985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1003-1176
               

               
Cow position:
               
chr3:4031982-4031805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
1003-1176
               

               
Cow position:
               
chr3:79207975-79208164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1004-1173
               

               
Cow position:
               
chr3:12287242-12287073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
1004-1173
               

               
Cow position:
               
chr3:49218305-49218476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
1004-1173
               

               
Cow position:
               
chr3:69849498-69849668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
1004-1173
               

               
Cow position:
               
chr3:75057121-75057290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
1004-1176
               

               
Cow position:
               
chr3:29807476-29807300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
1004-1176
               

               
Cow position:
               
chr3:83201516-83201689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
1007-1173
               

               
Cow position:
               
chr3:59515110-59514943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
1008-1173
               

               
Cow position:
               
chr3:77729461-77729290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
1011-1167
               

               
Cow position:
               
chr3:54960191-54960031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
1011-1176
               

               
Cow position:
               
chr3:48578840-48578671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
1012-1170
               

               
Cow position:
               
chr3:18056440-18056284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
1014-1160
               

               
Cow position:
               
chr3:28323177-28323036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
1014-1173
               

               
Cow position:
               
chr3:15859667-15859829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
1014-1176
               

               
Cow position:
               
chr3:9843586-9843422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
1014-1176
               

               
Cow position:
               
chr3:47524507-47524672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
1015-1152
               

               
Cow position:
               
chr3:15790553-15790419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1015-1176
               

               
Cow position:
               
chr3:28692431-28692599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
1015-1176
               

               
Cow position:
               
chr3:53192428-53192587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
1015-1176
               

               
Cow position:
               
chr3:84000611-84000447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
1016-1173
               

               
Cow position:
               
chr3:78894328-78894489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
1018-1170
               

               
Cow position:
               
chr3:44622891-44623044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
1020-1176
               

               
Cow position:
               
chr3:25060073-25059912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
1021-1176
               

               
Cow position:
               
chr3:41366988-41367149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
1024-1173
               

               
Cow position:
               
chr3:73590005-73590161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1024-1173
               

               
Cow position:
               
chr3:77227314-77227160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1024-1174
               

               
Cow position:
               
chr3:27247200-27247352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
1025-1172
               

               
Cow position:
               
chr3:49731651-49731804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
1029-1173
               

               
Cow position:
               
chr3:55062887-55063030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
1030-1176
               

               
Cow position:
               
chr3:27212347-27212196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1032-1176
               

               
Cow position:
               
chr3:8604037-8604179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
1036-1176
               

               
Cow position:
               
chr3:23945079-23944934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
1046-1176
               

               
Cow position:
               
chr3:22924443-22924573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.