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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8053H07.3
        

               
Conread position:
               
796-1130
               

               
Cow position:
               
chr5:28036011-28035672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
815-1176
               

               
Cow position:
               
chr5:71454364-71454711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 5
               

               
Conread position:
               
830-1073
               

               
Cow position:
               
chr5:17566201-17566449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
832-1150
               

               
Cow position:
               
chr5:30805410-30805077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
841-1079
               

               
Cow position:
               
chr5:58344086-58343842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
843-997
               

               
Cow position:
               
chr5:61647105-61647262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
843-1163
               

               
Cow position:
               
chr5:73167771-73168105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
843-1173
               

               
Cow position:
               
chr5:62869817-62870148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
843-1176
               

               
Cow position:
               
chr5:30487471-30487120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
845-1172
               

               
Cow position:
               
chr5:12322569-12322913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 177
               

               
Conread position:
               
845-1173
               

               
Cow position:
               
chr5:47680794-47681115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
846-1176
               

               
Cow position:
               
chr5:3626940-3627269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
846-1176
               

               
Cow position:
               
chr5:55177121-55176774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
846-1176
               

               
Cow position:
               
chr5:56028304-56028643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
52, 190
               

               
Conread position:
               
847-1176
               

               
Cow position:
               
chr5:2309320-2309676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
849-1171
               

               
Cow position:
               
chr5:62172635-62172305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
850-1103
               

               
Cow position:
               
chr5:45396195-45396452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
850-1169
               

               
Cow position:
               
chr5:740740-741049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr5:34562246-34561896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr5:72006641-72006970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 161
               

               
Conread position:
               
851-1172
               

               
Cow position:
               
chr5:14154359-14154035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
851-1173
               

               
Cow position:
               
chr5:3242259-3242589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
851-1173
               

               
Cow position:
               
chr5:38833349-38833010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr5:46512553-46512879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr5:66972645-66972311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
853-1159
               

               
Cow position:
               
chr5:22242540-22242873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
853-1163
               

               
Cow position:
               
chr5:44796503-44796835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
853-1173
               

               
Cow position:
               
chr5:64399218-64398897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
854-1048
               

               
Cow position:
               
chr5:47743855-47743643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
854-1145
               

               
Cow position:
               
chr5:42782515-42782802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
854-1173
               

               
Cow position:
               
chr5:26262451-26262785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 164
               

               
Conread position:
               
854-1173
               

               
Cow position:
               
chr5:41452459-41452777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr5:8023983-8024311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 5
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr5:27008108-27007783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr5:57074104-57074450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 44
               

               
Conread position:
               
855-1139
               

               
Cow position:
               
chr5:19752533-19752226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
855-1168
               

               
Cow position:
               
chr5:54090245-54089934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
855-1172
               

               
Cow position:
               
chr5:68329776-68330093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
855-1173
               

               
Cow position:
               
chr5:58320256-58320579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
856-965
               

               
Cow position:
               
chr5:22923636-22923521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
856-1025
               

               
Cow position:
               
chr5:42049892-42049723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
856-1027
               

               
Cow position:
               
chr5:37272602-37272433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
856-1052
               

               
Cow position:
               
chr5:1349580-1349781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
856-1053
               

               
Cow position:
               
chr5:75227982-75228189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
856-1070
               

               
Cow position:
               
chr5:23527417-23527638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
856-1074
               

               
Cow position:
               
chr5:21530898-21531115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
856-1104
               

               
Cow position:
               
chr5:50101147-50101420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
856-1108
               

               
Cow position:
               
chr5:36839178-36838908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
856-1117
               

               
Cow position:
               
chr5:63832149-63831872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
856-1126
               

               
Cow position:
               
chr5:66190196-66189922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
856-1139
               

               
Cow position:
               
chr5:18695367-18695098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
856-1148
               

               
Cow position:
               
chr5:31660448-31660739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
856-1152
               

               
Cow position:
               
chr5:35976725-35976429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
856-1163
               

               
Cow position:
               
chr5:35784774-35785079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
856-1171
               

               
Cow position:
               
chr5:27102582-27102905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
856-1172
               

               
Cow position:
               
chr5:42670642-42670968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr5:4280676-4280348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 237
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr5:15426734-15426416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr5:16025252-16025570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 150
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr5:29756548-29756228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr5:44847796-44848139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 226
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr5:53842522-53842171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:6528895-6528566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:6572962-6572639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 240
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:28224673-28224336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 221
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:41609473-41609183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
215, 39
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:41637075-41636754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:43922939-43923264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:46610886-46611212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:56014953-56014618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 273
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:57101566-57101892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr5:57934889-57935225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
857-1142
               

               
Cow position:
               
chr5:49946116-49945833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
857-1172
               

               
Cow position:
               
chr5:27411194-27411504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
857-1172
               

               
Cow position:
               
chr5:39442508-39442185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
5, 78
               

               
Conread position:
               
857-1176
               

               
Cow position:
               
chr5:3649253-3649574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
857-1176
               

               
Cow position:
               
chr5:28945850-28946186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
857-1176
               

               
Cow position:
               
chr5:40927783-40928091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
858-1173
               

               
Cow position:
               
chr5:48404986-48405291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 37
               

               
Conread position:
               
859-986
               

               
Cow position:
               
chr5:13890679-13890545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
859-1079
               

               
Cow position:
               
chr5:6987654-6987437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
859-1097
               

               
Cow position:
               
chr5:34914348-34914590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
859-1123
               

               
Cow position:
               
chr5:47836760-47836483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
859-1140
               

               
Cow position:
               
chr5:29515297-29515570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
859-1170
               

               
Cow position:
               
chr5:51503201-51502902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
859-1171
               

               
Cow position:
               
chr5:25899667-25899982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
859-1172
               

               
Cow position:
               
chr5:15364098-15363782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 243
               

               
Conread position:
               
859-1172
               

               
Cow position:
               
chr5:17028304-17027985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
859-1172
               

               
Cow position:
               
chr5:23366559-23366878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
859-1172
               

               
Cow position:
               
chr5:42050772-42050439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 199
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr5:29903315-29903635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr5:40387673-40387987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr5:41165310-41164975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
39, 328
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr5:48143562-48143900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 172
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr5:3669087-3668785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr5:16179295-16179641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 213
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr5:27419520-27419838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr5:29844489-29844163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr5:41604832-41604499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr5:55956138-55955793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 315
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr5:56524390-56524059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 272
               

               
Conread position:
               
860-1045
               

               
Cow position:
               
chr5:19079470-19079270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
860-1107
               

               
Cow position:
               
chr5:56153826-56153569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
860-1119
               

               
Cow position:
               
chr5:40237415-40237157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
860-1130
               

               
Cow position:
               
chr5:38738990-38738729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
860-1140
               

               
Cow position:
               
chr5:34625175-34624882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
38, 269
               

               
Conread position:
               
860-1152
               

               
Cow position:
               
chr5:50575995-50575693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr5:34441573-34441904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr5:40039562-40039883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr5:16937807-16938125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr5:18289347-18289013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 171
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr5:18899183-18898863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr5:28927396-28927705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr5:30303108-30302777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 156
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr5:48758148-48757830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr5:55068927-55068594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
861-1040
               

               
Cow position:
               
chr5:53145540-53145729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
861-1111
               

               
Cow position:
               
chr5:15471144-15470883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 154
               

               
Conread position:
               
861-1152
               

               
Cow position:
               
chr5:4617564-4617277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
861-1166
               

               
Cow position:
               
chr5:23529076-23529381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
861-1173
               

               
Cow position:
               
chr5:49474328-49474658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
861-1173
               

               
Cow position:
               
chr5:72952050-72951726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
861-1173
               

               
Cow position:
               
chr5:74643458-74643784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 168
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr5:12434761-12434420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 213
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr5:39695858-39695537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr5:44446649-44446984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
862-1127
               

               
Cow position:
               
chr5:15483241-15482970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
862-1172
               

               
Cow position:
               
chr5:3772067-3771729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 171
               

               
Conread position:
               
862-1173
               

               
Cow position:
               
chr5:35763469-35763162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
862-1176
               

               
Cow position:
               
chr5:16893553-16893888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 289
               

               
Conread position:
               
862-1176
               

               
Cow position:
               
chr5:41598506-41598817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
863-1173
               

               
Cow position:
               
chr5:14314740-14314412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 227
               

               
Conread position:
               
863-1173
               

               
Cow position:
               
chr5:40109708-40109386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
863-1173
               

               
Cow position:
               
chr5:56467894-56467584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
863-1176
               

               
Cow position:
               
chr5:30276911-30276581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
26, 213
               

               
Conread position:
               
864-1037
               

               
Cow position:
               
chr5:36823092-36822913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
864-1113
               

               
Cow position:
               
chr5:67118627-67118367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
865-1173
               

               
Cow position:
               
chr5:7723866-7723557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
865-1176
               

               
Cow position:
               
chr5:48009660-48009965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
867-1065
               

               
Cow position:
               
chr5:4267880-4267668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
867-1079
               

               
Cow position:
               
chr5:50860064-50859847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
867-1101
               

               
Cow position:
               
chr5:48178181-48178426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
867-1140
               

               
Cow position:
               
chr5:24175571-24175291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
867-1172
               

               
Cow position:
               
chr5:16214901-16214575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 299
               

               
Conread position:
               
869-1003
               

               
Cow position:
               
chr5:47353630-47353493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
869-1069
               

               
Cow position:
               
chr5:65197492-65197687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
869-1161
               

               
Cow position:
               
chr5:23536374-23536077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
869-1176
               

               
Cow position:
               
chr5:1949859-1950178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
869-1176
               

               
Cow position:
               
chr5:47696242-47696558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
870-1161
               

               
Cow position:
               
chr5:18554084-18553798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
210, 16
               

               
Conread position:
               
870-1171
               

               
Cow position:
               
chr5:46798440-46798142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
870-1176
               

               
Cow position:
               
chr5:39875322-39875007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
873-1105
               

               
Cow position:
               
chr5:38717509-38717275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
25, 151
               

               
Conread position:
               
873-1126
               

               
Cow position:
               
chr5:56799078-56799326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
873-1142
               

               
Cow position:
               
chr5:37757651-37757908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
873-1148
               

               
Cow position:
               
chr5:17267699-17267983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
873-1173
               

               
Cow position:
               
chr5:22643033-22643331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
874-1176
               

               
Cow position:
               
chr5:66815378-66815691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
875-1172
               

               
Cow position:
               
chr5:37646287-37645962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
877-1172
               

               
Cow position:
               
chr5:9893939-9894241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
877-1173
               

               
Cow position:
               
chr5:15721878-15722179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 189
               

               
Conread position:
               
877-1173
               

               
Cow position:
               
chr5:56071043-56070743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
877-1176
               

               
Cow position:
               
chr5:26377470-26377783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
878-1144
               

               
Cow position:
               
chr5:43403093-43402816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
878-1170
               

               
Cow position:
               
chr5:24349299-24348997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
61, 202
               

               
Conread position:
               
879-1099
               

               
Cow position:
               
chr5:30247342-30247557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
181, 31
               

               
Conread position:
               
880-1160
               

               
Cow position:
               
chr5:69731691-69731407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
880-1176
               

               
Cow position:
               
chr5:41713495-41713186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 161
               

               
Conread position:
               
881-1176
               

               
Cow position:
               
chr5:14473218-14473533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
883-1150
               

               
Cow position:
               
chr5:46079959-46080225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
883-1152
               

               
Cow position:
               
chr5:46129487-46129753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
883-1176
               

               
Cow position:
               
chr5:68719047-68718760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
884-1163
               

               
Cow position:
               
chr5:35228964-35229232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
229, 26
               

               
Conread position:
               
884-1172
               

               
Cow position:
               
chr5:42064385-42064086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
884-1173
               

               
Cow position:
               
chr5:12902097-12901802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
884-1173
               

               
Cow position:
               
chr5:51053470-51053761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
884-1173
               

               
Cow position:
               
chr5:55756235-55756544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr5:7057219-7057522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr5:12673302-12673578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr5:20128232-20127940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr5:35246930-35247226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr5:50600224-50599940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr5:64140716-64140414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
885-1157
               

               
Cow position:
               
chr5:46681541-46681812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
892-1129
               

               
Cow position:
               
chr5:59626802-59627042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr5:21829037-21828750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr5:24996049-24996339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
893-1171
               

               
Cow position:
               
chr5:35685106-35684827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
893-1173
               

               
Cow position:
               
chr5:33080619-33080902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
893-1173
               

               
Cow position:
               
chr5:72564939-72564647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
893-1176
               

               
Cow position:
               
chr5:30978524-30978247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
894-1168
               

               
Cow position:
               
chr5:63964003-63964277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
894-1171
               

               
Cow position:
               
chr5:26594929-26595214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
894-1173
               

               
Cow position:
               
chr5:4927390-4927680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
894-1176
               

               
Cow position:
               
chr5:26990569-26990276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 144
               

               
Conread position:
               
894-1176
               

               
Cow position:
               
chr5:31923543-31923256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
894-1176
               

               
Cow position:
               
chr5:36855384-36855088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 186
               

               
Conread position:
               
895-1172
               

               
Cow position:
               
chr5:6890854-6891130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
895-1176
               

               
Cow position:
               
chr5:6286261-6286540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 171
               

               
Conread position:
               
895-1176
               

               
Cow position:
               
chr5:62639073-62638791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
896-1139
               

               
Cow position:
               
chr5:69636396-69636156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
896-1173
               

               
Cow position:
               
chr5:54350184-54350481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
904-1173
               

               
Cow position:
               
chr5:13537296-13537039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
906-1173
               

               
Cow position:
               
chr5:36486642-36486378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
907-1176
               

               
Cow position:
               
chr5:38805185-38805455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 229
               

               
Conread position:
               
914-1171
               

               
Cow position:
               
chr5:56518081-56518321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
200, 19
               

               
Conread position:
               
916-1176
               

               
Cow position:
               
chr5:4166791-4166546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
916-1176
               

               
Cow position:
               
chr5:45397720-45397462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
917-1173
               

               
Cow position:
               
chr5:3639347-3639605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
919-1171
               

               
Cow position:
               
chr5:38076334-38076594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 217
               

               
Conread position:
               
919-1173
               

               
Cow position:
               
chr5:76366146-76366405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 151
               

               
Conread position:
               
921-1176
               

               
Cow position:
               
chr5:34301051-34300800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
923-1173
               

               
Cow position:
               
chr5:60747137-60747389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
924-1038
               

               
Cow position:
               
chr5:51490460-51490577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
924-1091
               

               
Cow position:
               
chr5:52108126-52108296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 163
               

               
Conread position:
               
924-1124
               

               
Cow position:
               
chr5:20843253-20843464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
924-1142
               

               
Cow position:
               
chr5:32394741-32394519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
924-1171
               

               
Cow position:
               
chr5:20422052-20422295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
924-1172
               

               
Cow position:
               
chr5:58446950-58446691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 155
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr5:11427093-11427351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr5:14903925-14904189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr5:45574763-45574502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr5:65776242-65776495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr5:7755428-7755678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr5:18574316-18574054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr5:39258648-39258407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr5:58144475-58144720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
925-1071
               

               
Cow position:
               
chr5:59627242-59627092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1072
               

               
Cow position:
               
chr5:9369129-9369280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
925-1131
               

               
Cow position:
               
chr5:67212502-67212285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
925-1142
               

               
Cow position:
               
chr5:50713614-50713853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
925-1150
               

               
Cow position:
               
chr5:47323604-47323375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
925-1152
               

               
Cow position:
               
chr5:15479267-15479034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
925-1152
               

               
Cow position:
               
chr5:49685135-49685362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
925-1157
               

               
Cow position:
               
chr5:59872938-59873187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 237
               

               
Conread position:
               
925-1158
               

               
Cow position:
               
chr5:62378922-62378693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
925-1168
               

               
Cow position:
               
chr5:36868877-36868631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
925-1169
               

               
Cow position:
               
chr5:35126197-35125945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
925-1171
               

               
Cow position:
               
chr5:45845546-45845803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr5:4031844-4032106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr5:34528688-34528450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr5:30253883-30253628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr5:35969674-35969429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr5:37808521-37808789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 183
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr5:47601954-47601706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr5:52165037-52165292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr5:54767767-54768023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
925-1175
               

               
Cow position:
               
chr5:7698142-7697890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 143
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:458630-458366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:1396741-1396500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:5257146-5257408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 243
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:6503739-6503996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 195
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:11229531-11229785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:16206013-16206271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:23168684-23168941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 214
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:25035116-25035359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:26467769-26467507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:29771670-29771402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 235
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:32338824-32339080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:43929594-43929852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:44993907-44994154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:54060418-54060160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:54311478-54311216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:55966741-55966995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:57737241-57736994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:58519274-58519521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:64139702-64139450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:66339217-66338963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:69337962-69337713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:69461477-69461218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 197
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr5:71494963-71494701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
926-1150
               

               
Cow position:
               
chr5:46022924-46023147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
926-1159
               

               
Cow position:
               
chr5:55019433-55019194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 140
               

               
Conread position:
               
926-1164
               

               
Cow position:
               
chr5:36038860-36039108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
926-1173
               

               
Cow position:
               
chr5:33560595-33560847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr5:14920789-14921045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr5:21617599-21617342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
40, 212
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr5:66257777-66257523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
927-1172
               

               
Cow position:
               
chr5:32378967-32378747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
927-1172
               

               
Cow position:
               
chr5:60016304-60016055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
927-1173
               

               
Cow position:
               
chr5:4710012-4710258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
927-1173
               

               
Cow position:
               
chr5:30629018-30629271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
927-1173
               

               
Cow position:
               
chr5:44726194-44726439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr5:7552273-7552535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr5:25230880-25231120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 7
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr5:29828186-29827933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 159
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr5:35826740-35826487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr5:50943016-50943266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr5:61487972-61488225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr5:63426866-63427122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
928-1056
               

               
Cow position:
               
chr5:26723586-26723455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
928-1100
               

               
Cow position:
               
chr5:49501685-49501863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 146
               

               
Conread position:
               
928-1109
               

               
Cow position:
               
chr5:58555276-58555093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
928-1127
               

               
Cow position:
               
chr5:11769408-11769201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
928-1151
               

               
Cow position:
               
chr5:33834177-33833953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
928-1160
               

               
Cow position:
               
chr5:6895988-6896227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 85
               

               
Conread position:
               
928-1162
               

               
Cow position:
               
chr5:64523724-64523969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 171
               

               
Conread position:
               
928-1166
               

               
Cow position:
               
chr5:17062942-17063196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
928-1168
               

               
Cow position:
               
chr5:47316835-47317079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
928-1170
               

               
Cow position:
               
chr5:23678564-23678814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
928-1171
               

               
Cow position:
               
chr5:57419655-57419904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
928-1172
               

               
Cow position:
               
chr5:65941112-65941362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr5:8820874-8821121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr5:11668046-11668299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr5:41545754-41546002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr5:43992463-43992208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:9089889-9090136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:17869824-17869590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:30845247-30844997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:31561674-31561416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:37646405-37646662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
35, 242
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:48573638-48573880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:50215425-50215672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:50723185-50722932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:63987307-63987567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr5:64026880-64027124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
929-1081
               

               
Cow position:
               
chr5:57230200-57230356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
929-1105
               

               
Cow position:
               
chr5:55795828-55796008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
929-1152
               

               
Cow position:
               
chr5:5855996-5855776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
929-1152
               

               
Cow position:
               
chr5:63234691-63234921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
929-1163
               

               
Cow position:
               
chr5:54375364-54375610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
929-1167
               

               
Cow position:
               
chr5:34463442-34463692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
929-1170
               

               
Cow position:
               
chr5:26097427-26097185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
929-1172
               

               
Cow position:
               
chr5:64175988-64176229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
929-1173
               

               
Cow position:
               
chr5:29352989-29353241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr5:4221116-4220868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr5:6045434-6045175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr5:19278569-19278816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr5:26476880-26477128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr5:30949777-30950032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 179
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr5:65588827-65588587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
930-1167
               

               
Cow position:
               
chr5:67932335-67932571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
930-1171
               

               
Cow position:
               
chr5:53947034-53946782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
930-1172
               

               
Cow position:
               
chr5:20779261-20779498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
930-1175
               

               
Cow position:
               
chr5:13717434-13717686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
930-1176
               

               
Cow position:
               
chr5:45273365-45273617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
930-1176
               

               
Cow position:
               
chr5:65967594-65967844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 175
               

               
Conread position:
               
931-1176
               

               
Cow position:
               
chr5:7044569-7044823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
931-1176
               

               
Cow position:
               
chr5:19813083-19813331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 168
               

               
Conread position:
               
931-1176
               

               
Cow position:
               
chr5:50821919-50821666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
933-1166
               

               
Cow position:
               
chr5:41294215-41293974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
933-1167
               

               
Cow position:
               
chr5:60715234-60715466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
933-1173
               

               
Cow position:
               
chr5:52000352-52000109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr5:4218991-4218759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr5:27306438-27306204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr5:44752173-44752427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 185
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr5:62142810-62142554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 201
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr5:67244052-67243813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
934-1173
               

               
Cow position:
               
chr5:21039850-21040089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
934-1176
               

               
Cow position:
               
chr5:11539921-11540164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
934-1176
               

               
Cow position:
               
chr5:58856235-58855987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
936-1166
               

               
Cow position:
               
chr5:64758636-64758878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
936-1173
               

               
Cow position:
               
chr5:45804191-45803950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr5:14629684-14629929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
937-1081
               

               
Cow position:
               
chr5:45574235-45574381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
937-1173
               

               
Cow position:
               
chr5:15598108-15598346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 164
               

               
Conread position:
               
937-1176
               

               
Cow position:
               
chr5:64321879-64321637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
144, 31
               

               
Conread position:
               
939-1157
               

               
Cow position:
               
chr5:30233035-30232802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
939-1160
               

               
Cow position:
               
chr5:21534983-21535215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
939-1176
               

               
Cow position:
               
chr5:22934328-22934569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
939-1176
               

               
Cow position:
               
chr5:49440743-49440988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
942-1173
               

               
Cow position:
               
chr5:44028182-44028414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
942-1173
               

               
Cow position:
               
chr5:57575898-57575656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
943-1176
               

               
Cow position:
               
chr5:42744904-42744672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
944-1176
               

               
Cow position:
               
chr5:41129865-41129645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
944-1176
               

               
Cow position:
               
chr5:67540078-67540319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
946-1170
               

               
Cow position:
               
chr5:58793486-58793724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
947-1167
               

               
Cow position:
               
chr5:56636015-56635793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 108
               

               
Conread position:
               
948-1081
               

               
Cow position:
               
chr5:62415842-62415980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
948-1176
               

               
Cow position:
               
chr5:50637940-50637710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
952-1173
               

               
Cow position:
               
chr5:55929059-55928829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 195
               

               
Conread position:
               
952-1176
               

               
Cow position:
               
chr5:5110964-5111189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
966-1163
               

               
Cow position:
               
chr5:40295928-40296130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 182
               

               
Conread position:
               
967-1075
               

               
Cow position:
               
chr5:57062433-57062541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 99
               

               
Conread position:
               
967-1166
               

               
Cow position:
               
chr5:31475778-31475575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
967-1168
               

               
Cow position:
               
chr5:73080301-73080094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
967-1172
               

               
Cow position:
               
chr5:61840284-61840074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
146, 91
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr5:59115478-59115265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr5:65883676-65883892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
968-1166
               

               
Cow position:
               
chr5:23357424-23357228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 32
               

               
Conread position:
               
968-1168
               

               
Cow position:
               
chr5:34887100-34887303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
968-1172
               

               
Cow position:
               
chr5:31918737-31918539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
185, 34
               

               
Conread position:
               
968-1172
               

               
Cow position:
               
chr5:32696728-32696932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
116, 10
               

               
Conread position:
               
968-1172
               

               
Cow position:
               
chr5:39447440-39447642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 147
               

               
Conread position:
               
968-1172
               

               
Cow position:
               
chr5:69520986-69520781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
968-1173
               

               
Cow position:
               
chr5:57327896-57327683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
968-1173
               

               
Cow position:
               
chr5:57561618-57561404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
968-1173
               

               
Cow position:
               
chr5:66366604-66366405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr5:16509201-16508979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr5:28926087-28926300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr5:43737868-43738069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr5:52644985-52645195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
99, 108
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr5:63865890-63865679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
969-1152
               

               
Cow position:
               
chr5:51935283-51935100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
969-1169
               

               
Cow position:
               
chr5:65593962-65593768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
973-1127
               

               
Cow position:
               
chr5:37893424-37893266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1151
               

               
Cow position:
               
chr5:34050208-34050025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
973-1163
               

               
Cow position:
               
chr5:33552333-33552513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
140, 89
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr5:19523990-19523785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr5:29213028-29212832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr5:34505836-34506038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr5:47704036-47704242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
973-1173
               

               
Cow position:
               
chr5:53855796-53855581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr5:5938412-5938208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
141, 89
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr5:8162728-8162939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr5:19335691-19335903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr5:65601547-65601344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 125
               

               
Conread position:
               
974-1152
               

               
Cow position:
               
chr5:22445997-22445823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
974-1161
               

               
Cow position:
               
chr5:34192996-34192797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
974-1172
               

               
Cow position:
               
chr5:3281924-3281723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 160
               

               
Conread position:
               
974-1176
               

               
Cow position:
               
chr5:72173116-72172911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
976-1176
               

               
Cow position:
               
chr5:75436799-75437009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 94
               

               
Conread position:
               
977-1176
               

               
Cow position:
               
chr5:39181830-39182027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
978-1168
               

               
Cow position:
               
chr5:56820179-56820370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
978-1176
               

               
Cow position:
               
chr5:46122268-46122466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
980-1173
               

               
Cow position:
               
chr5:34638967-34638771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
981-1172
               

               
Cow position:
               
chr5:991546-991354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
134, 83
               

               
Conread position:
               
984-1173
               

               
Cow position:
               
chr5:27155096-27154910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
985-1174
               

               
Cow position:
               
chr5:32140630-32140822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
991-1176
               

               
Cow position:
               
chr5:32956023-32956212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
997-1173
               

               
Cow position:
               
chr5:64823245-64823424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 121
               

               
Conread position:
               
997-1176
               

               
Cow position:
               
chr5:45940543-45940728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
998-1176
               

               
Cow position:
               
chr5:21964354-21964169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
1004-1172
               

               
Cow position:
               
chr5:23866112-23866275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
1004-1176
               

               
Cow position:
               
chr5:12709948-12709769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1005-1176
               

               
Cow position:
               
chr5:17644597-17644772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
1007-1152
               

               
Cow position:
               
chr5:54713675-54713823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
1007-1176
               

               
Cow position:
               
chr5:65924634-65924812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
1008-1173
               

               
Cow position:
               
chr5:51800917-51801086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
1008-1176
               

               
Cow position:
               
chr5:29979927-29980099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 130
               

               
Conread position:
               
1010-1176
               

               
Cow position:
               
chr5:8994511-8994682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
1010-1176
               

               
Cow position:
               
chr5:24485381-24485552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
1012-1168
               

               
Cow position:
               
chr5:21944450-21944286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
1012-1176
               

               
Cow position:
               
chr5:7921353-7921516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
1014-1170
               

               
Cow position:
               
chr5:60448265-60448105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
1014-1172
               

               
Cow position:
               
chr5:34115702-34115538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
1014-1176
               

               
Cow position:
               
chr5:35235660-35235825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
1018-1173
               

               
Cow position:
               
chr5:7140061-7140224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1020-1176
               

               
Cow position:
               
chr5:16185131-16184971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
1020-1176
               

               
Cow position:
               
chr5:37713851-37714014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1020-1176
               

               
Cow position:
               
chr5:71505171-71505009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
1021-1155
               

               
Cow position:
               
chr5:20345204-20345071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
1023-1163
               

               
Cow position:
               
chr5:56469782-56469929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1026-1157
               

               
Cow position:
               
chr5:29860388-29860250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1026-1176
               

               
Cow position:
               
chr5:47721581-47721422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1027-1173
               

               
Cow position:
               
chr5:56433844-56433691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 5
               
Show alignments to all cow chromosomes.