Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053I23.5 |
| Conread position: | 1-298 |
| Cow position: | chr10:9010129-9009832 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-309 |
| Cow position: | chr10:9031356-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-463 |
| Cow position: | chr10:9010297-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 291 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 68, 62 |
| Conread position: | 1-504 |
| Cow position: | chr10:8996401-8995907 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 0 |
| Conread position: | 1-526 |
| Cow position: | chr10:9010465-9009940 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 1-543 |
| Cow position: | chr10:21939221-21938681 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 375, 370 |
| Conread position: | 1-618 |
| Cow position: | chr10:8996653-8996038 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 567 |
| Conread position: | 1-618 |
| Cow position: | chr10:8996737-8996122 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 538, 559 |
| Conread position: | 3-393 |
| Cow position: | chr10:9031275-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-551 |
| Cow position: | chr10:8996567-8996018 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 99 |
| Conread position: | 23-551 |
| Cow position: | chr10:8996883-8996354 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 39-510 |
| Cow position: | chr10:21939099-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 316 |
| Conread position: | 42-477 |
| Cow position: | chr10:9031229-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-542 |
| Cow position: | chr10:9010335-9009840 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 188 |
| Conread position: | 47-602 |
| Cow position: | chr10:8996775-8996222 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 47-612 |
| Cow position: | chr10:9010503-9009940 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 393 |
| Conread position: | 48-485 |
| Cow position: | chr10:8996438-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 75-521 |
| Cow position: | chr10:9010559-9010113 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 124 |
| Conread position: | 84-518 |
| Cow position: | chr10:21939222-21938788 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-600 |
| Cow position: | chr10:8996884-8996392 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 438, 454 |
| Conread position: | 130-564 |
| Cow position: | chr10:9031233-9031667 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 160-349 |
| Cow position: | chr10:9031664-9031854 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 107 |
| Conread position: | 167-578 |
| Cow position: | chr10:21939223-21938812 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 336, 326 |
| Conread position: | 168-566 |
| Cow position: | chr10:9031187-9031588 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 124 |
| Conread position: | 179-617 |
| Cow position: | chr10:8996895-8996459 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 381 |
| Conread position: | 211-538 |
| Cow position: | chr10:9010591-9010264 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 151, 155 |
| Conread position: | 225-617 |
| Cow position: | chr10:8996933-8996543 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 229, 223 |
| Conread position: | 336-519 |
| Cow position: | chr10:9031672-9031856 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 142, 0 |
Show alignments to all cow chromosomes.