Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053I23.5 |
| Conread position: | 1-476 |
| Cow position: | chr13:39984428-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 268 |
| Conread position: | 1-519 |
| Cow position: | chr13:39984008-39984526 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 450, 446 |
| Conread position: | 1-519 |
| Cow position: | chr13:39984092-39984610 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 268 |
| Conread position: | 1-524 |
| Cow position: | chr13:39984176-39984699 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-536 |
| Cow position: | chr13:39984260-39984794 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 268 |
| Conread position: | 1-566 |
| Cow position: | chr13:39930588-39931154 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 188, 196 |
| Conread position: | 1-568 |
| Cow position: | chr13:56292331-56291774 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 5-542 |
| Cow position: | chr13:56333659-56334206 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 336 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 7, 288 |
| Conread position: | 22-405 |
| Cow position: | chr13:56333929-56334321 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 30-582 |
| Cow position: | chr13:56333769-56334329 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 344 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 295, 520 |
| Conread position: | 34-602 |
| Cow position: | chr13:39983954-39984523 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 238 |
| Conread position: | 38-483 |
| Cow position: | chr13:56333609-56334054 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 47-519 |
| Cow position: | chr13:39984390-39984862 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 222 |
| Conread position: | 68-574 |
| Cow position: | chr13:56292853-56292352 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 292, 78 |
| Conread position: | 70-507 |
| Cow position: | chr13:56317356-56317785 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 209, 126 |
| Conread position: | 86-551 |
| Cow position: | chr13:39983841-39984307 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 291 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 365, 358 |
| Conread position: | 123-474 |
| Cow position: | chr13:56317930-56318287 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 77, 63 |
| Conread position: | 131-553 |
| Cow position: | chr13:56333618-56334039 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 141-526 |
| Cow position: | chr13:39983812-39984197 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 164-574 |
| Cow position: | chr13:39930583-39930993 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 179, 201 |
Show alignments to all cow chromosomes.