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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8053I23.5
        

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:42744017-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:51765130-51764901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr18:44184186-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr18:55524092-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr18:42674621-42674369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 89
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr18:56494292-56494550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr18:51874420-51874684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:42674705-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:42984776-42984471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:44240541-44240846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr18:51970451-51970761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
281, 89
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr18:56247373-56247059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
229, 0
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:50021697-50021377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
185, 193
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr18:52448060-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
228, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr18:53586299-53585970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
194, 198
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr18:50251195-50251534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr18:53610019-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
311, 0
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr18:51788941-51788595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
343, 268
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:51367567-51367192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
364, 0
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr18:50849119-50849495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr18:55066746-55066359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:56329235-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:40075303-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:44184354-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:55018496-55018896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
194, 205
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:44397907-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 102
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr18:50246357-50246789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr18:56128821-56129252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
311, 0
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr18:33092910-33092475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:50849035-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr18:43048700-43048240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
398, 379
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr18:40085908-40085428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 413
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr18:50048607-50048140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:42744269-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:43022455-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr18:42837572-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 446
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr18:41198275-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr18:50281870-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
264, 278
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr18:1418114-1418600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr18:43174908-43174431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 247
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr18:53635344-53634860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
332, 311
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:41948816-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 0
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr18:42694020-42693531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
262, 276
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr18:42827432-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 266
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr18:44253204-44252723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr18:53571839-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr18:51839281-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr18:51400644-51401140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr18:50848195-50848692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:14453260-14452761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:50251030-50251525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr18:42792420-42792919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr18:52428501-52429001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 444
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:51400728-51401231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 343
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr18:43119959-43119454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 115
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:42960187-42959690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 0
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:50250947-50251447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr18:51789277-51788770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 291
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr18:51812520-51812013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:40306617-40307127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:41949236-41948726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:42744353-42743843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:42791916-42792426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:42837656-42837146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:42959935-42959434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:43175076-43174566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:43175412-43174902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:44184522-44184012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 276
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:44239953-44240463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
450, 439
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:50848531-50849041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 194
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:51765970-51765460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 101
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:53525720-53526230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:53559954-53560464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:53586971-53586461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:53610355-53609845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:54993268-54993778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 102
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:33064574-33064063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 283
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:33064826-33064315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:40074967-40075478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 366
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:40086318-40085817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 113
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42960271-42959760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 436
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:44253863-44253353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 232
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50098919-50099430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 197
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50099675-50100186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50295216-50295727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 198
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51400308-51400819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 370
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52427661-52428172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
435, 448
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52427829-52428340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 280
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52427997-52428508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 365
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52428081-52428592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52433178-52433689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 365
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:55066914-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:55523336-55523847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:56434325-56434835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50048859-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 198
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:56316161-56316677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:33092994-33092478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 291
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:40086152-40085642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 141
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:42674957-42674440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 193
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:42985364-42984847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:44153842-44153337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
287, 176
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:44239869-44240386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
512, 0
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:50099591-50100107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 197
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:51765886-51765370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 364
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:53560290-53560802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 113
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:53586635-53586119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 195
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:53587055-53586538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 323
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:53635428-53634912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:54967315-54967828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
326, 307
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:54992932-54993449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 101
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:54993100-54993617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 123
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:55018244-55018762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
114, 102
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:50099087-50099606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 196
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:33064742-33064224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 449
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:44398075-44397557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:50048943-50048425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:50099171-50099689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 196
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:50099507-50100025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 198
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:50281786-50282304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:50848783-50849301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 151
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:51752055-51751535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 192
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:53498081-53498602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 197
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:53560206-53560724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:54980176-54980693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
104, 117
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:55066998-55066480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:33064658-33064139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 323
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54967984-54968501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:33093078-33092558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:51765634-51765114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:51765718-51765197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:56434157-56434679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 106
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:50246021-50246543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:51969453-51969964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 157
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:54993436-54993956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 195
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr18:53525972-53526492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr18:41197939-41198465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr18:50271657-50272181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 198
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr18:54980092-54980617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
186, 198
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr18:55008839-55009364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
490, 0
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:51789529-51789001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 196
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:53635764-53635236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 114
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:53635932-53635404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 39
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:56493956-56494484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:42792168-42792697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 289
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:42792336-42792865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 374
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:50271489-50272017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 366
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:50848615-50849144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:51812772-51812243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 196
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:52433766-52434294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 359
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:55523756-55524285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 95
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:56128149-56128679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
275, 296
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr18:40324436-40323903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 291
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr18:42791412-42791946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr18:50100011-50100532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr18:50246189-50246723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr18:51789781-51789247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 113
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr18:56247963-56247423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:50083730-50084265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 196
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:51789613-51789078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 198
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:51812688-51812153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:51812856-51812321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:51969537-51970061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:54979840-54980375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 367
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:55067082-55066548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr18:44154003-44153486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 18
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr18:51874091-51874621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:40306533-40307071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:40306785-40307323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:41198023-41198561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:42744437-42743899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:42837740-42837202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:52428249-52428787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 420
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:52433430-52433968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 420
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:42792084-42792623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:44184774-44184235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:51400392-51400931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 366
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:51812436-51811897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 359
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:50022291-50021748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
221, 363
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:52447052-52447592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 307
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:52447304-52447844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:53525804-53526344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 196
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:53559702-53560242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:53509602-53510147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:53610271-53609730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
376, 371
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:53635596-53635055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
375, 371
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr18:42985280-42984731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr18:56330159-56329610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
543, 0
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr18:41198191-41198741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr18:43175580-43175030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 0
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr18:44398243-44397693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
528, 518
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr18:50083478-50084028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 197
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr18:53509350-53509900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 196
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:41949320-41948769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 0
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:42837908-42837357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 194
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:42985028-42984477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:42985112-42984561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:43093390-43092839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 192
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:43175244-43174693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 286
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:44240205-44240756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:44398159-44397608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
445, 437
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:49033354-49032803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:50021952-50021398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
211, 363
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:51839533-51838982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 131
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:52428333-52428884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:52433514-52434065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:52447388-52447939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 274
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr18:14453992-14453440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 0
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr18:56247701-56247157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
504, 188
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr18:43093306-43092753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 102
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:42791244-42791811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 198
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:42837824-42837257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 0
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:43093882-43093327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
541, 152
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:44398411-44397844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 0
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:50295384-50295947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 100
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:51400476-51401043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 194
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:51812604-51812037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 285
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:53498339-53498904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 125
               

               
Conread position:
               
1-566
               

               
Cow position:
               
chr18:33064154-33063586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr18:50271573-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
1-574
               

               
Cow position:
               
chr18:41197855-41198428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 94
               

               
Conread position:
               
1-574
               

               
Cow position:
               
chr18:42791748-42792321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chr18:50059091-50058514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 130
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr18:52428417-52428994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 420
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr18:52433598-52434175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 414
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:43175655-43175083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 62
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:44184858-44184277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:56247785-56247212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 284
               

               
Conread position:
               
1-600
               

               
Cow position:
               
chr18:41197687-41198284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
520, 542
               

               
Conread position:
               
1-600
               

               
Cow position:
               
chr18:50083562-50084159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 194
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:33064238-33063639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 198
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:33064910-33064311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:41197603-41198202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:41949152-41948553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 570
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:42744605-42744006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 568
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:42791328-42791927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 30
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:42792252-42792851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 198
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:42960103-42959513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 350
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:43022791-43022192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 268
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:43093558-43092959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:50059595-50058996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
291, 286
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:51752223-51751624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 375
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:53559870-53560469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr18:50083310-50083916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr18:50083394-50084000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 183
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr18:51367986-51367381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 177
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr18:53560038-53560644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 364
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr18:49032850-49032241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 95
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr18:42791664-42792275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr18:42792000-42792611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 367
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr18:50848867-50849478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 192
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr18:33064490-33063878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 197
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr18:40075051-40075663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr18:40306197-40306809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 103
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr18:53586887-53586275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 361
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr18:56329739-56329127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 102
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:1417862-1418475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:40324604-40323991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:40324688-40324075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 79
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:42744521-42743908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 559
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:42744689-42744076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
542, 561
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:42791496-42792109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 286
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:43022623-43022010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:50059427-50058814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 278
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:52428165-52428778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 184
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:52433010-52433623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 420
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr18:52433346-52433959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 198
               

               
Conread position:
               
1-617
               

               
Cow position:
               
chr18:52447136-52447750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 223
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr18:41198107-41198722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
541, 559
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr18:43022707-43022092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 277
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr18:43093642-43093027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 102
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr18:44398327-44397712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 559
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr18:56329487-56328872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 102
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr18:56330075-56329460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 102
               

               
Conread position:
               
1-619
               

               
Cow position:
               
chr18:43093723-43093110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
1-624
               

               
Cow position:
               
chr18:43093474-43092851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
543, 567
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr18:50848363-50848994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 89
               

               
Conread position:
               
2-519
               

               
Cow position:
               
chr18:33064991-33064476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
2-521
               

               
Cow position:
               
chr18:33065078-33064558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 240
               

               
Conread position:
               
2-530
               

               
Cow position:
               
chr18:42790993-42791521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 98
               

               
Conread position:
               
2-550
               

               
Cow position:
               
chr18:44398574-44398029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
539, 15
               

               
Conread position:
               
2-551
               

               
Cow position:
               
chr18:42791581-42792131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 278
               

               
Conread position:
               
2-611
               

               
Cow position:
               
chr18:43167653-43168260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr18:50246443-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr18:42959849-42959415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
3-478
               

               
Cow position:
               
chr18:56329317-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 321
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr18:53635510-53635003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
477, 0
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:53586717-53586208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 192
               

               
Conread position:
               
3-517
               

               
Cow position:
               
chr18:42694102-42693588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
205, 199
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr18:56316247-56316762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-519
               

               
Cow position:
               
chr18:56128655-56129171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
510, 477
               

               
Conread position:
               
3-539
               

               
Cow position:
               
chr18:52433096-52433632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr18:52427747-52428286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
3-551
               

               
Cow position:
               
chr18:52447558-52448107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
3-578
               

               
Cow position:
               
chr18:52447810-52448386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
4-537
               

               
Cow position:
               
chr18:51368404-51367870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 361
               

               
Conread position:
               
4-539
               

               
Cow position:
               
chr18:40086657-40086118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
4-581
               

               
Cow position:
               
chr18:43120125-43119546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 282
               

               
Conread position:
               
4-602
               

               
Cow position:
               
chr18:1417948-1418545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 221
               

               
Conread position:
               
5-602
               

               
Cow position:
               
chr18:50271409-50272004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 192
               

               
Conread position:
               
6-473
               

               
Cow position:
               
chr18:50058834-50058369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 193
               

               
Conread position:
               
6-496
               

               
Cow position:
               
chr18:50059254-50058764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 264
               

               
Conread position:
               
6-512
               

               
Cow position:
               
chr18:50059506-50059000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 233
               

               
Conread position:
               
6-517
               

               
Cow position:
               
chr18:51812935-51812423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 109
               

               
Conread position:
               
6-518
               

               
Cow position:
               
chr18:50059674-50059161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 369
               

               
Conread position:
               
6-530
               

               
Cow position:
               
chr18:51400565-51401089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 193
               

               
Conread position:
               
6-565
               

               
Cow position:
               
chr18:42675036-42674474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
533, 0
               

               
Conread position:
               
7-424
               

               
Cow position:
               
chr18:49032509-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
7-436
               

               
Cow position:
               
chr18:51838502-51838081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
414, 89
               

               
Conread position:
               
7-511
               

               
Cow position:
               
chr18:44184685-44184180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
7-551
               

               
Cow position:
               
chr18:41948979-41948433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
7-616
               

               
Cow position:
               
chr18:51367897-51367290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
11-524
               

               
Cow position:
               
chr18:44154245-44153739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 0
               

               
Conread position:
               
11-617
               

               
Cow position:
               
chr18:40086981-40086376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
18-496
               

               
Cow position:
               
chr18:50022019-50021538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 176
               

               
Conread position:
               
20-512
               

               
Cow position:
               
chr18:44153907-44153427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 0
               

               
Conread position:
               
20-616
               

               
Cow position:
               
chr18:51874026-51874613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
539, 133
               

               
Conread position:
               
21-550
               

               
Cow position:
               
chr18:53559808-53560336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
521, 8
               

               
Conread position:
               
22-498
               

               
Cow position:
               
chr18:42693747-42693271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr18:51874358-51874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
305, 298
               

               
Conread position:
               
23-511
               

               
Cow position:
               
chr18:44184920-44184432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-539
               

               
Cow position:
               
chr18:41949046-41948530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-541
               

               
Cow position:
               
chr18:52446990-52447508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 254
               

               
Conread position:
               
23-542
               

               
Cow position:
               
chr18:52432948-52433467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
23-551
               

               
Cow position:
               
chr18:41948878-41948349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
23-551
               

               
Cow position:
               
chr18:44154488-44153957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
23-551
               

               
Cow position:
               
chr18:52427599-52428128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
23-618
               

               
Cow position:
               
chr18:43120189-43119596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
518, 537
               

               
Conread position:
               
24-225
               

               
Cow position:
               
chr18:42984669-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-225
               

               
Cow position:
               
chr18:44240648-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-307
               

               
Cow position:
               
chr18:49023033-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-388
               

               
Cow position:
               
chr18:42984837-42984473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-388
               

               
Cow position:
               
chr18:44240480-44240844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-479
               

               
Cow position:
               
chr18:42674850-42674395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-495
               

               
Cow position:
               
chr18:52447915-52448387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 424
               

               
Conread position:
               
24-497
               

               
Cow position:
               
chr18:43174969-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
435, 426
               

               
Conread position:
               
24-517
               

               
Cow position:
               
chr18:42985509-42985015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 245
               

               
Conread position:
               
24-518
               

               
Cow position:
               
chr18:49022697-49023192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 225
               

               
Conread position:
               
24-519
               

               
Cow position:
               
chr18:51789170-51788675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 171
               

               
Conread position:
               
24-523
               

               
Cow position:
               
chr18:51839426-51838927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-551
               

               
Cow position:
               
chr18:43175473-43174945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
518, 0
               

               
Conread position:
               
24-602
               

               
Cow position:
               
chr18:43175137-43174561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 92
               

               
Conread position:
               
24-602
               

               
Cow position:
               
chr18:52447663-52448239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 251
               

               
Conread position:
               
25-517
               

               
Cow position:
               
chr18:42985424-42984931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 82
               

               
Conread position:
               
25-517
               

               
Cow position:
               
chr18:43022935-43022442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
488, 0
               

               
Conread position:
               
25-549
               

               
Cow position:
               
chr18:42985172-42984647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 168
               

               
Conread position:
               
25-581
               

               
Cow position:
               
chr18:42675185-42674628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
534, 523
               

               
Conread position:
               
25-616
               

               
Cow position:
               
chr18:43120271-43119682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 239
               

               
Conread position:
               
26-350
               

               
Cow position:
               
chr18:44153577-44153255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
26-477
               

               
Cow position:
               
chr18:42984919-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-511
               

               
Cow position:
               
chr18:44239810-44240295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 251
               

               
Conread position:
               
26-511
               

               
Cow position:
               
chr18:44240314-44240799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
26-511
               

               
Cow position:
               
chr18:51367710-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 169
               

               
Conread position:
               
26-549
               

               
Cow position:
               
chr18:44240062-44240586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 252
               

               
Conread position:
               
28-507
               

               
Cow position:
               
chr18:51766028-51765548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
28-520
               

               
Cow position:
               
chr18:42791102-42791595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
28-615
               

               
Cow position:
               
chr18:56493899-56494484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 337
               

               
Conread position:
               
28-618
               

               
Cow position:
               
chr18:41197545-41198134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 533
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr18:43022175-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-405
               

               
Cow position:
               
chr18:1418226-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 337
               

               
Conread position:
               
29-496
               

               
Cow position:
               
chr18:55066803-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 419
               

               
Conread position:
               
29-511
               

               
Cow position:
               
chr18:43022847-43022365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 417
               

               
Conread position:
               
29-517
               

               
Cow position:
               
chr18:43120015-43119526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 0
               

               
Conread position:
               
29-517
               

               
Cow position:
               
chr18:55018019-55018509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 331
               

               
Conread position:
               
29-530
               

               
Cow position:
               
chr18:54979699-54980201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
29-551
               

               
Cow position:
               
chr18:42791859-42792383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
29-616
               

               
Cow position:
               
chr18:51969079-51969644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
30-231
               

               
Cow position:
               
chr18:50246638-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-313
               

               
Cow position:
               
chr18:54968263-54968546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
168, 162
               

               
Conread position:
               
30-480
               

               
Cow position:
               
chr18:40306897-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
30-482
               

               
Cow position:
               
chr18:44397962-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 420
               

               
Conread position:
               
30-498
               

               
Cow position:
               
chr18:55523869-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
154, 167
               

               
Conread position:
               
30-499
               

               
Cow position:
               
chr18:51789668-51789199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 253
               

               
Conread position:
               
30-512
               

               
Cow position:
               
chr18:56128094-56128576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 71
               

               
Conread position:
               
30-517
               

               
Cow position:
               
chr18:54967175-54967663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
10, 162
               

               
Conread position:
               
30-517
               

               
Cow position:
               
chr18:56434438-56434926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
463, 314
               

               
Conread position:
               
30-519
               

               
Cow position:
               
chr18:1418059-1418548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 110
               

               
Conread position:
               
30-551
               

               
Cow position:
               
chr18:50048998-50048476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
30-551
               

               
Cow position:
               
chr18:52447501-52448023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
511, 0
               

               
Conread position:
               
30-551
               

               
Cow position:
               
chr18:52447753-52448275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 502
               

               
Conread position:
               
30-566
               

               
Cow position:
               
chr18:51368545-51368006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 502
               

               
Conread position:
               
30-566
               

               
Cow position:
               
chr18:53587110-53586571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 167
               

               
Conread position:
               
30-602
               

               
Cow position:
               
chr18:42675516-42674946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
511, 530
               

               
Conread position:
               
30-617
               

               
Cow position:
               
chr18:52446913-52447498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 446
               

               
Conread position:
               
30-618
               

               
Cow position:
               
chr18:40324743-40324157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
514, 534
               

               
Conread position:
               
30-619
               

               
Cow position:
               
chr18:40324827-40324240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 260
               

               
Conread position:
               
30-664
               

               
Cow position:
               
chr18:43168017-43168656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 385
               

               
Conread position:
               
31-512
               

               
Cow position:
               
chr18:49032652-49032171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 420
               

               
Conread position:
               
31-517
               

               
Cow position:
               
chr18:43175298-43174811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 419
               

               
Conread position:
               
31-519
               

               
Cow position:
               
chr18:51765520-51765032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 168
               

               
Conread position:
               
31-521
               

               
Cow position:
               
chr18:33064293-33063802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 417
               

               
Conread position:
               
31-530
               

               
Cow position:
               
chr18:55008700-55009200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
34-518
               

               
Cow position:
               
chr18:22634701-22635186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 90
               

               
Conread position:
               
35-507
               

               
Cow position:
               
chr18:51970318-51970782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
35-523
               

               
Cow position:
               
chr18:51839331-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 167
               

               
Conread position:
               
35-551
               

               
Cow position:
               
chr18:53560156-53560673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 331
               

               
Conread position:
               
36-278
               

               
Cow position:
               
chr18:51873763-51874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 95
               

               
Conread position:
               
36-522
               

               
Cow position:
               
chr18:40306148-40306634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-529
               

               
Cow position:
               
chr18:51765767-51765274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
36-535
               

               
Cow position:
               
chr18:51752272-51751773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 172
               

               
Conread position:
               
36-536
               

               
Cow position:
               
chr18:51789410-51788910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
418, 411
               

               
Conread position:
               
36-547
               

               
Cow position:
               
chr18:51874203-51874714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 97
               

               
Conread position:
               
36-551
               

               
Cow position:
               
chr18:51789326-51788810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 250
               

               
Conread position:
               
36-616
               

               
Cow position:
               
chr18:51368455-51367877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 95
               

               
Conread position:
               
38-391
               

               
Cow position:
               
chr18:49022963-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr18:56494161-56494551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 0
               

               
Conread position:
               
38-517
               

               
Cow position:
               
chr18:22634539-22635017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
38-517
               

               
Cow position:
               
chr18:55018113-55018593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 231
               

               
Conread position:
               
38-517
               

               
Cow position:
               
chr18:56433781-56434253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 162
               

               
Conread position:
               
38-519
               

               
Cow position:
               
chr18:42790945-42791426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-519
               

               
Cow position:
               
chr18:50083683-50084164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 161
               

               
Conread position:
               
38-525
               

               
Cow position:
               
chr18:50059138-50058651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
38-527
               

               
Cow position:
               
chr18:55008792-55009281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 94
               

               
Conread position:
               
38-531
               

               
Cow position:
               
chr18:44253335-44252850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
248, 226
               

               
Conread position:
               
38-531
               

               
Cow position:
               
chr18:53635979-53635486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-542
               

               
Cow position:
               
chr18:42837955-42837451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-551
               

               
Cow position:
               
chr18:50848146-50848662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
38-565
               

               
Cow position:
               
chr18:43167857-43168387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
38-581
               

               
Cow position:
               
chr18:42675088-42674544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
38-602
               

               
Cow position:
               
chr18:50848736-50849298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 323
               

               
Conread position:
               
38-607
               

               
Cow position:
               
chr18:51368117-51367551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
38-610
               

               
Cow position:
               
chr18:56434035-56434596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
338, 58
               

               
Conread position:
               
38-625
               

               
Cow position:
               
chr18:54992801-54993388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 161
               

               
Conread position:
               
39-352
               

               
Cow position:
               
chr18:51765260-51764947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-490
               

               
Cow position:
               
chr18:56316451-56316902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
192, 201
               

               
Conread position:
               
39-501
               

               
Cow position:
               
chr18:14453786-14453320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
417, 410
               

               
Conread position:
               
39-506
               

               
Cow position:
               
chr18:51751933-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 333
               

               
Conread position:
               
39-511
               

               
Cow position:
               
chr18:53509304-53509776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 326
               

               
Conread position:
               
39-511
               

               
Cow position:
               
chr18:53586513-53586041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-516
               

               
Cow position:
               
chr18:53586429-53585951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 160
               

               
Conread position:
               
39-517
               

               
Cow position:
               
chr18:54992886-54993364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 152
               

               
Conread position:
               
39-531
               

               
Cow position:
               
chr18:53610401-53609909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-537
               

               
Cow position:
               
chr18:55523710-55524208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 141
               

               
Conread position:
               
39-537
               

               
Cow position:
               
chr18:56329953-56329455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 285
               

               
Conread position:
               
39-540
               

               
Cow position:
               
chr18:55523626-55524127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
39-549
               

               
Cow position:
               
chr18:56329533-56329022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
500, 0
               

               
Conread position:
               
39-551
               

               
Cow position:
               
chr18:49033148-49032635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 408
               

               
Conread position:
               
39-566
               

               
Cow position:
               
chr18:53509472-53510000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
146, 158
               

               
Conread position:
               
39-582
               

               
Cow position:
               
chr18:55017778-55018322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
39-602
               

               
Cow position:
               
chr18:49032980-49032419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
505, 521
               

               
Conread position:
               
39-611
               

               
Cow position:
               
chr18:55008459-55009027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
237, 97
               

               
Conread position:
               
40-618
               

               
Cow position:
               
chr18:43120498-43119932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 9
               

               
Conread position:
               
43-517
               

               
Cow position:
               
chr18:54967105-54967580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
305, 324
               

               
Conread position:
               
43-602
               

               
Cow position:
               
chr18:40324978-40324425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
516, 6
               

               
Conread position:
               
44-516
               

               
Cow position:
               
chr18:54967274-54967744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
44-517
               

               
Cow position:
               
chr18:54979799-54980273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
44-518
               

               
Cow position:
               
chr18:42960474-42960005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
470, 107
               

               
Conread position:
               
44-518
               

               
Cow position:
               
chr18:44239744-44240219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
44-526
               

               
Cow position:
               
chr18:22634627-22635109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
153, 162
               

               
Conread position:
               
44-581
               

               
Cow position:
               
chr18:43120336-43119798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
470, 482
               

               
Conread position:
               
45-511
               

               
Cow position:
               
chr18:40306493-40306959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 152
               

               
Conread position:
               
45-529
               

               
Cow position:
               
chr18:56128445-56128929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
186, 195
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr18:50099973-50100335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
47-433
               

               
Cow position:
               
chr18:49022888-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
368, 373
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr18:51367605-51367207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-477
               

               
Cow position:
               
chr18:44240419-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-492
               

               
Cow position:
               
chr18:50021822-50021374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
81, 309
               

               
Conread position:
               
47-511
               

               
Cow position:
               
chr18:43022493-43022029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
47-511
               

               
Cow position:
               
chr18:43022997-43022533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
47-511
               

               
Cow position:
               
chr18:43023081-43022617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
47-511
               

               
Cow position:
               
chr18:52012033-52011569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
47-511
               

               
Cow position:
               
chr18:52012285-52011821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
47-512
               

               
Cow position:
               
chr18:50099301-50099766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 168
               

               
Conread position:
               
47-512
               

               
Cow position:
               
chr18:52433308-52433773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 234
               

               
Conread position:
               
47-516
               

               
Cow position:
               
chr18:51368276-51367807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 233
               

               
Conread position:
               
47-517
               

               
Cow position:
               
chr18:55017954-55018424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 69
               

               
Conread position:
               
47-519
               

               
Cow position:
               
chr18:51838712-51838245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
47-520
               

               
Cow position:
               
chr18:49032552-49032079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
47-525
               

               
Cow position:
               
chr18:56316123-56316601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
47-530
               

               
Cow position:
               
chr18:41197817-41198300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
47-536
               

               
Cow position:
               
chr18:14454030-14453541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 332
               

               
Conread position:
               
47-541
               

               
Cow position:
               
chr18:56329777-56329283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 401
               

               
Conread position:
               
47-544
               

               
Cow position:
               
chr18:43048738-43048242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 283
               

               
Conread position:
               
47-549
               

               
Cow position:
               
chr18:40086190-40085694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 179
               

               
Conread position:
               
47-550
               

               
Cow position:
               
chr18:54979634-54980138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 301
               

               
Conread position:
               
47-551
               

               
Cow position:
               
chr18:42675247-42674742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
47-551
               

               
Cow position:
               
chr18:42675331-42674826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 193
               

               
Conread position:
               
47-551
               

               
Cow position:
               
chr18:42744727-42744222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
497, 0
               

               
Conread position:
               
47-574
               

               
Cow position:
               
chr18:50059717-50059190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
407, 401
               

               
Conread position:
               
47-609
               

               
Cow position:
               
chr18:43094004-43093456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
47-625
               

               
Cow position:
               
chr18:43175693-43175127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
494, 104
               

               
Conread position:
               
48-304
               

               
Cow position:
               
chr18:51765167-51764911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
48-484
               

               
Cow position:
               
chr18:40075266-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
48-492
               

               
Cow position:
               
chr18:44184391-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 145
               

               
Conread position:
               
48-510
               

               
Cow position:
               
chr18:53610140-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 319
               

               
Conread position:
               
48-512
               

               
Cow position:
               
chr18:52427540-52428004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
48-512
               

               
Cow position:
               
chr18:52432889-52433353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
48-517
               

               
Cow position:
               
chr18:54993063-54993532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 158
               

               
Conread position:
               
48-528
               

               
Cow position:
               
chr18:42960308-42959829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 0
               

               
Conread position:
               
48-528
               

               
Cow position:
               
chr18:56493748-56494231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
48-529
               

               
Cow position:
               
chr18:56128280-56128761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
280, 276
               

               
Conread position:
               
48-535
               

               
Cow position:
               
chr18:51812977-51812490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
48-535
               

               
Cow position:
               
chr18:53636053-53635566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
48-537
               

               
Cow position:
               
chr18:40306412-40306900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 0
               

               
Conread position:
               
48-542
               

               
Cow position:
               
chr18:56128616-56129110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
227, 246
               

               
Conread position:
               
48-551
               

               
Cow position:
               
chr18:51789818-51789314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 147
               

               
Conread position:
               
49-495
               

               
Cow position:
               
chr18:54968114-54968561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
146, 150
               

               
Conread position:
               
49-508
               

               
Cow position:
               
chr18:54993400-54993859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 231
               

               
Conread position:
               
49-511
               

               
Cow position:
               
chr18:50281750-50282212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
49-511
               

               
Cow position:
               
chr18:51368778-51368316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
49-511
               

               
Cow position:
               
chr18:53610475-53610013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-512
               

               
Cow position:
               
chr18:42985568-42985105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 222
               

               
Conread position:
               
49-512
               

               
Cow position:
               
chr18:49022806-49023269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 121
               

               
Conread position:
               
49-512
               

               
Cow position:
               
chr18:53525684-53526147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
143, 150
               

               
Conread position:
               
49-517
               

               
Cow position:
               
chr18:54967696-54968163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
49-517
               

               
Cow position:
               
chr18:54992728-54993197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 139
               

               
Conread position:
               
49-518
               

               
Cow position:
               
chr18:50245817-50246286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 159
               

               
Conread position:
               
49-523
               

               
Cow position:
               
chr18:55018376-55018852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
146, 157
               

               
Conread position:
               
49-526
               

               
Cow position:
               
chr18:54967948-54968423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
147, 80
               

               
Conread position:
               
49-537
               

               
Cow position:
               
chr18:44184558-44184070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 312
               

               
Conread position:
               
49-537
               

               
Cow position:
               
chr18:56434121-56434609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 402
               

               
Conread position:
               
49-541
               

               
Cow position:
               
chr18:52447268-52447760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 91
               

               
Conread position:
               
49-598
               

               
Cow position:
               
chr18:54966943-54967490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
229, 235
               

               
Conread position:
               
49-611
               

               
Cow position:
               
chr18:54979468-54980028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 235
               

               
Conread position:
               
49-612
               

               
Cow position:
               
chr18:53509230-53509791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
143, 150
               

               
Conread position:
               
49-616
               

               
Cow position:
               
chr18:44253899-44253335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 399
               

               
Conread position:
               
50-441
               

               
Cow position:
               
chr18:51970416-51970800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
50-493
               

               
Cow position:
               
chr18:14453295-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
50-511
               

               
Cow position:
               
chr18:43167785-43168246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
50-511
               

               
Cow position:
               
chr18:51969334-51969793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 146
               

               
Conread position:
               
50-542
               

               
Cow position:
               
chr18:56316378-56316870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
50-550
               

               
Cow position:
               
chr18:43175768-43175282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
462, 46
               

               
Conread position:
               
50-557
               

               
Cow position:
               
chr18:50246322-50246828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 147
               

               
Conread position:
               
50-565
               

               
Cow position:
               
chr18:50022071-50021550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
135, 144
               

               
Conread position:
               
50-574
               

               
Cow position:
               
chr18:14453859-14453332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 273
               

               
Conread position:
               
50-616
               

               
Cow position:
               
chr18:50848328-50848892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
51-434
               

               
Cow position:
               
chr18:51765332-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
138, 157
               

               
Conread position:
               
51-507
               

               
Cow position:
               
chr18:42724762-42724306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
51-511
               

               
Cow position:
               
chr18:52012197-52011737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
144, 148
               

               
Conread position:
               
51-511
               

               
Cow position:
               
chr18:56128535-56128995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
51-512
               

               
Cow position:
               
chr18:50099809-50100270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 148
               

               
Conread position:
               
51-512
               

               
Cow position:
               
chr18:51765416-51764955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 232
               

               
Conread position:
               
51-512
               

               
Cow position:
               
chr18:53635630-53635169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
51-512
               

               
Cow position:
               
chr18:56128367-56128828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 148
               

               
Conread position:
               
51-517
               

               
Cow position:
               
chr18:40074933-40075399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 147
               

               
Conread position:
               
51-517
               

               
Cow position:
               
chr18:56128787-56129253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
51-551
               

               
Cow position:
               
chr18:55067116-55066615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 232
               

               
Conread position:
               
51-551
               

               
Cow position:
               
chr18:56329353-56328852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 396
               

               
Conread position:
               
51-616
               

               
Cow position:
               
chr18:1417828-1418391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 332
               

               
Conread position:
               
51-618
               

               
Cow position:
               
chr18:56329857-56329292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
52-616
               

               
Cow position:
               
chr18:44398444-44397882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
489, 508
               

               
Conread position:
               
53-497
               

               
Cow position:
               
chr18:43094163-43093722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 48
               

               
Conread position:
               
54-512
               

               
Cow position:
               
chr18:54966864-54967322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
54-551
               

               
Cow position:
               
chr18:41949351-41948853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 214
               

               
Conread position:
               
55-495
               

               
Cow position:
               
chr18:56247482-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 21
               

               
Conread position:
               
55-538
               

               
Cow position:
               
chr18:56316047-56316530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 144
               

               
Conread position:
               
55-551
               

               
Cow position:
               
chr18:56248161-56247654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
56-517
               

               
Cow position:
               
chr18:54967034-54967495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
56-551
               

               
Cow position:
               
chr18:43120408-43119912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
57-322
               

               
Cow position:
               
chr18:40251562-40251822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
57-535
               

               
Cow position:
               
chr18:42724840-42724362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
318, 310
               

               
Conread position:
               
57-536
               

               
Cow position:
               
chr18:51838786-51838312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
305, 217
               

               
Conread position:
               
58-574
               

               
Cow position:
               
chr18:49022229-49022743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
60-551
               

               
Cow position:
               
chr18:40324881-40324389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
60-609
               

               
Cow position:
               
chr18:56330184-56329637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 384
               

               
Conread position:
               
61-511
               

               
Cow position:
               
chr18:50281678-50282128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 135
               

               
Conread position:
               
67-522
               

               
Cow position:
               
chr18:55017890-55018345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
67-537
               

               
Cow position:
               
chr18:51839551-51839081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 380
               

               
Conread position:
               
67-616
               

               
Cow position:
               
chr18:51969033-51969562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
309, 202
               

               
Conread position:
               
68-537
               

               
Cow position:
               
chr18:51766071-51765602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 302
               

               
Conread position:
               
68-540
               

               
Cow position:
               
chr18:55523319-55523791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-550
               

               
Cow position:
               
chr18:53559685-53560168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr18:51813041-51812557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 224
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr18:53571822-53572293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
68-611
               

               
Cow position:
               
chr18:56493855-56494396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 130
               

               
Conread position:
               
69-473
               

               
Cow position:
               
chr18:22634820-22635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
69-519
               

               
Cow position:
               
chr18:49021498-49021945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
70-512
               

               
Cow position:
               
chr18:50295201-50295643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
116, 123
               

               
Conread position:
               
70-534
               

               
Cow position:
               
chr18:50049214-50048749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr18:53610537-53610100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
364, 374
               

               
Conread position:
               
71-522
               

               
Cow position:
               
chr18:49022494-49022943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 102
               

               
Conread position:
               
71-602
               

               
Cow position:
               
chr18:41197505-41198034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
71-612
               

               
Cow position:
               
chr18:50098905-50099445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 128
               

               
Conread position:
               
71-618
               

               
Cow position:
               
chr18:49033368-49032823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
72-401
               

               
Cow position:
               
chr18:40323791-40323469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
190, 57
               

               
Conread position:
               
72-523
               

               
Cow position:
               
chr18:51752319-51751869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
72-529
               

               
Cow position:
               
chr18:53636113-53635656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
74-512
               

               
Cow position:
               
chr18:43167977-43168415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 377
               

               
Conread position:
               
74-512
               

               
Cow position:
               
chr18:50083299-50083737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 124
               

               
Conread position:
               
75-523
               

               
Cow position:
               
chr18:51400298-51400746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 195
               

               
Conread position:
               
75-551
               

               
Cow position:
               
chr18:42827422-42827899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
467, 0
               

               
Conread position:
               
75-566
               

               
Cow position:
               
chr18:33093088-33092594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
78-497
               

               
Cow position:
               
chr18:51969282-51969695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 53
               

               
Conread position:
               
79-511
               

               
Cow position:
               
chr18:50031128-50030697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 115
               

               
Conread position:
               
79-581
               

               
Cow position:
               
chr18:42675383-42674880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 452
               

               
Conread position:
               
80-512
               

               
Cow position:
               
chr18:50083221-50083653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr18:50295379-50295851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 119
               

               
Conread position:
               
82-405
               

               
Cow position:
               
chr18:40251117-40251429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
82-507
               

               
Cow position:
               
chr18:50022378-50021950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
194, 206
               

               
Conread position:
               
84-632
               

               
Cow position:
               
chr18:56247786-56247244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
105-539
               

               
Cow position:
               
chr18:41949384-41948950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-517
               

               
Cow position:
               
chr18:44239725-44240134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 173
               

               
Conread position:
               
111-616
               

               
Cow position:
               
chr18:42744747-42744244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
430, 449
               

               
Conread position:
               
114-512
               

               
Cow position:
               
chr18:54979449-54979847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
233, 254
               

               
Conread position:
               
114-519
               

               
Cow position:
               
chr18:50245798-50246203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
114-550
               

               
Cow position:
               
chr18:49022619-49023056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
114-571
               

               
Cow position:
               
chr18:50031009-50030550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
164, 73
               

               
Conread position:
               
114-616
               

               
Cow position:
               
chr18:42837963-42837463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
427, 446
               

               
Conread position:
               
118-520
               

               
Cow position:
               
chr18:40074916-40075318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 197
               

               
Conread position:
               
118-566
               

               
Cow position:
               
chr18:55017773-55018224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
118-574
               

               
Cow position:
               
chr18:43167514-43167973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 194
               

               
Conread position:
               
118-597
               

               
Cow position:
               
chr18:50022513-50022030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
121-551
               

               
Cow position:
               
chr18:44254075-44253648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 76
               

               
Conread position:
               
123-512
               

               
Cow position:
               
chr18:42960479-42960096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr18:54979374-54979768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
123-519
               

               
Cow position:
               
chr18:54992634-54993030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
123-525
               

               
Cow position:
               
chr18:56128103-56128505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-551
               

               
Cow position:
               
chr18:42790862-42791291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
419, 0
               

               
Conread position:
               
128-387
               

               
Cow position:
               
chr18:51751347-51751092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
130-512
               

               
Cow position:
               
chr18:43023082-43022700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-517
               

               
Cow position:
               
chr18:43048739-43048351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 0
               

               
Conread position:
               
130-517
               

               
Cow position:
               
chr18:53498042-53498435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 139
               

               
Conread position:
               
130-523
               

               
Cow position:
               
chr18:51766092-51765700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
130-553
               

               
Cow position:
               
chr18:33093117-33092695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
130-582
               

               
Cow position:
               
chr18:14454031-14453578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
130-602
               

               
Cow position:
               
chr18:42985571-42985101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 222
               

               
Conread position:
               
131-499
               

               
Cow position:
               
chr18:52012452-52012085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
131-530
               

               
Cow position:
               
chr18:51873609-51874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
131-534
               

               
Cow position:
               
chr18:49021641-49022043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
225, 235
               

               
Conread position:
               
132-529
               

               
Cow position:
               
chr18:56248245-56247856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
160, 24
               

               
Conread position:
               
132-551
               

               
Cow position:
               
chr18:52427540-52427960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 146
               

               
Conread position:
               
132-551
               

               
Cow position:
               
chr18:52432889-52433309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 146
               

               
Conread position:
               
133-508
               

               
Cow position:
               
chr18:49021727-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 104
               

               
Conread position:
               
133-515
               

               
Cow position:
               
chr18:53525684-53526067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
133-516
               

               
Cow position:
               
chr18:51971296-51971671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
133-533
               

               
Cow position:
               
chr18:56433708-56434112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
182, 235
               

               
Conread position:
               
133-541
               

               
Cow position:
               
chr18:56493665-56494076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
134-525
               

               
Cow position:
               
chr18:50295183-50295572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
223, 22
               

               
Conread position:
               
134-551
               

               
Cow position:
               
chr18:14453295-14452877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 319
               

               
Conread position:
               
134-551
               

               
Cow position:
               
chr18:53497965-53498386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
136-405
               

               
Cow position:
               
chr18:43053464-43053195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-519
               

               
Cow position:
               
chr18:33065109-33064728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
139-565
               

               
Cow position:
               
chr18:42827402-42827831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
402, 0
               

               
Conread position:
               
141-423
               

               
Cow position:
               
chr18:42724588-42724306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
143-511
               

               
Cow position:
               
chr18:56330185-56329817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
145-511
               

               
Cow position:
               
chr18:49033378-49033012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 52
               

               
Conread position:
               
147-530
               

               
Cow position:
               
chr18:51752409-51752030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
118, 8
               

               
Conread position:
               
147-617
               

               
Cow position:
               
chr18:51969029-51969479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 123
               

               
Conread position:
               
150-512
               

               
Cow position:
               
chr18:50098900-50099262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
150-553
               

               
Cow position:
               
chr18:41197500-41197902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 377
               

               
Conread position:
               
154-512
               

               
Cow position:
               
chr18:50083211-50083569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
155-539
               

               
Cow position:
               
chr18:40306183-40306567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
359, 369
               

               
Conread position:
               
156-526
               

               
Cow position:
               
chr18:56128052-56128422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
156-541
               

               
Cow position:
               
chr18:51789878-51789493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
156-611
               

               
Cow position:
               
chr18:51813037-51812584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
158-519
               

               
Cow position:
               
chr18:50281689-50282052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
158-529
               

               
Cow position:
               
chr18:51400297-51400668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
141, 128
               

               
Conread position:
               
167-609
               

               
Cow position:
               
chr18:43094213-43093780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
274, 35
               

               
Conread position:
               
170-617
               

               
Cow position:
               
chr18:51789945-51789503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
174-632
               

               
Cow position:
               
chr18:50059674-50059214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
157, 163
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr18:44239714-44240043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 89
               

               
Conread position:
               
187-517
               

               
Cow position:
               
chr18:44184924-44184593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
312, 317
               

               
Conread position:
               
198-511
               

               
Cow position:
               
chr18:52012468-52012157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
199-518
               

               
Cow position:
               
chr18:14453314-14452995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
201-435
               

               
Cow position:
               
chr18:22634534-22634766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
205-511
               

               
Cow position:
               
chr18:42827384-42827690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-582
               

               
Cow position:
               
chr18:1417814-1418192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
146, 157
               

               
Conread position:
               
205-602
               

               
Cow position:
               
chr18:42985580-42985185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 167
               

               
Conread position:
               
206-511
               

               
Cow position:
               
chr18:43023090-43022785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
207-565
               

               
Cow position:
               
chr18:50059725-50059364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
234, 256
               

               
Conread position:
               
208-616
               

               
Cow position:
               
chr18:52427532-52427938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
208-616
               

               
Cow position:
               
chr18:52432881-52433287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
208-618
               

               
Cow position:
               
chr18:14454037-14453629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 378
               

               
Conread position:
               
212-540
               

               
Cow position:
               
chr18:43048741-43048413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
217-512
               

               
Cow position:
               
chr18:55067118-55066823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 107
               

               
Conread position:
               
218-529
               

               
Cow position:
               
chr18:51969017-51969313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
219-512
               

               
Cow position:
               
chr18:55523302-55523595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
224-564
               

               
Cow position:
               
chr18:53559673-53560016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
227-532
               

               
Cow position:
               
chr18:56330185-56329880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
194, 189
               

               
Conread position:
               
228-618
               

               
Cow position:
               
chr18:40306171-40306560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
10, 341
               

               
Conread position:
               
231-615
               

               
Cow position:
               
chr18:51400286-51400668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
240-518
               

               
Cow position:
               
chr18:50031135-50030858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
274, 199
               

               
Conread position:
               
245-494
               

               
Cow position:
               
chr18:43053439-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-519
               

               
Cow position:
               
chr18:43023105-43022861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
290-602
               

               
Cow position:
               
chr18:56330206-56329896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
215, 209
               

               
Conread position:
               
291-517
               

               
Cow position:
               
chr18:51970322-51970547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
298-551
               

               
Cow position:
               
chr18:51766092-51765839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
313-618
               

               
Cow position:
               
chr18:49033378-49033075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
200, 207
               

               
Conread position:
               
355-550
               

               
Cow position:
               
chr18:43023109-43022913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
380-581
               

               
Cow position:
               
chr18:43048741-43048539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
161, 182
               
Show alignments to all cow chromosomes.