Cow genome map

Conread name: Ss1.1-Pig4-TMW8053I23.5

Conread position: 1-410
Cow position:
Alignm length: 414
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 1-415
Cow position:
Alignm length: 415
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-442
Cow position:
Alignm length: 443
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 34

Conread position: 1-491
Cow position:
Alignm length: 492
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 352

Conread position: 1-498
Cow position:
Alignm length: 499
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 447

Conread position: 1-512
Cow position:
Alignm length: 513
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 319

Conread position: 1-512
Cow position:
Alignm length: 516
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 1-514
Cow position:
Alignm length: 516
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 113

Conread position: 1-517
Cow position:
Alignm length: 519
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 100

Conread position: 1-517
Cow position:
Alignm length: 519
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 446

Conread position: 1-519
Cow position:
Alignm length: 521
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 128

Conread position: 1-519
Cow position:
Alignm length: 519
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-526
Cow position:
Alignm length: 530
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 29

Conread position: 1-537
Cow position:
Alignm length: 539
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 109

Conread position: 1-539
Cow position:
Alignm length: 540
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 1-542
Cow position:
Alignm length: 543
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 534, 527

Conread position: 1-551
Cow position:
Alignm length: 553
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 409

Conread position: 1-551
Cow position:
Alignm length: 553
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 540, 284

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 190

Conread position: 1-565
Cow position:
Alignm length: 567
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 534, 35

Conread position: 1-578
Cow position:
Alignm length: 580
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 323

Conread position: 1-597
Cow position:
Alignm length: 601
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 1-600
Cow position:
Alignm length: 601
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 558, 537

Conread position: 1-600
Cow position:
Alignm length: 604
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 101

Conread position: 1-600
Cow position:
Alignm length: 604
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 100

Conread position: 1-602
Cow position:
Alignm length: 609
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 274

Conread position: 1-602
Cow position:
Alignm length: 604
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 540, 567

Conread position: 1-602
Cow position:
Alignm length: 604
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 558, 533

Conread position: 1-602
Cow position:
Alignm length: 605
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 537, 531

Conread position: 1-615
Cow position:
Alignm length: 616
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 558, 217

Conread position: 1-615
Cow position:
Alignm length: 616
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 537, 141

Conread position: 1-617
Cow position:
Alignm length: 621
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 115

Conread position: 1-617
Cow position:
Alignm length: 621
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 110

Conread position: 2-486
Cow position:
Alignm length: 487
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 41

Conread position: 3-505
Cow position:
Alignm length: 505
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 8

Conread position: 3-512
Cow position:
Alignm length: 510
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-519
Cow position:
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 193

Conread position: 3-551
Cow position:
Alignm length: 551
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 237

Conread position: 3-578
Cow position:
Alignm length: 579
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 99

Conread position: 3-616
Cow position:
Alignm length: 616
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 541, 557

Conread position: 4-520
Cow position:
Alignm length: 518
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 6-602
Cow position:
Alignm length: 600
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 21

Conread position: 21-566
Cow position:
Alignm length: 550
Alignm identity: 332
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 514, 20

Conread position: 23-553
Cow position:
Alignm length: 534
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 31

Conread position: 24-538
Cow position:
Alignm length: 519
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 5

Conread position: 27-602
Cow position:
Alignm length: 578
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 257

Conread position: 30-512
Cow position:
Alignm length: 484
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 256

Conread position: 30-512
Cow position:
Alignm length: 483
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-541
Cow position:
Alignm length: 512
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 30-574
Cow position:
Alignm length: 546
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 514, 532

Conread position: 38-551
Cow position:
Alignm length: 519
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 239

Conread position: 38-570
Cow position:
Alignm length: 535
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 503, 494

Conread position: 39-526
Cow position:
Alignm length: 493
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 44-482
Cow position:
Alignm length: 439
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 44-519
Cow position:
Alignm length: 476
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 47-526
Cow position:
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 48-551
Cow position:
Alignm length: 508
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 190

Conread position: 48-612
Cow position:
Alignm length: 566
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 496, 512

Conread position: 50-511
Cow position:
Alignm length: 464
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 220

Conread position: 50-607
Cow position:
Alignm length: 566
Alignm identity: 349
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 136

Conread position: 61-519
Cow position:
Alignm length: 460
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 61-549
Cow position:
Alignm length: 490
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 478, 164

Conread position: 69-537
Cow position:
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 70-523
Cow position:
Alignm length: 460
Alignm identity: 296
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 30, 120

Conread position: 70-551
Cow position:
Alignm length: 486
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 44

Conread position: 78-512
Cow position:
Alignm length: 437
Alignm identity: 270
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 150, 25

Conread position: 80-494
Cow position:
Alignm length: 416
Alignm identity: 269
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 290, 61

Conread position: 81-602
Cow position:
Alignm length: 524
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 45

Conread position: 127-511
Cow position:
Alignm length: 387
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 137

Conread position: 134-518
Cow position:
Alignm length: 389
Alignm identity: 248
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 59, 25

Conread position: 136-618
Cow position:
Alignm length: 485
Alignm identity: 298
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 323, 174

Conread position: 163-616
Cow position:
Alignm length: 456
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 296

Conread position: 167-602
Cow position:
Alignm length: 438
Alignm identity: 261
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 373, 51

Conread position: 198-499
Cow position:
Alignm length: 302
Alignm identity: 208
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 207-542
Cow position:
Alignm length: 339
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 32

Conread position: 212-537
Cow position:
Alignm length: 327
Alignm identity: 211
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 313, 317

Conread position: 215-602
Cow position:
Alignm length: 395
Alignm identity: 257
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 12, 26

Conread position: 225-529
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 307-615
Cow position:
Alignm length: 311
Alignm identity: 204
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 36, 55

Show alignments to all cow chromosomes.