Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053I23.5 |
| Conread position: | 1-307 |
| Cow position: | chr2:82800140-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 1-517 |
| Cow position: | chr2:78754942-78755458 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 198 |
| Conread position: | 1-519 |
| Cow position: | chr2:78755528-78756045 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 139 |
| Conread position: | 1-519 |
| Cow position: | chr2:86465292-86465810 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 115, 95 |
| Conread position: | 1-523 |
| Cow position: | chr2:82799468-82799990 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 323 |
| Conread position: | 1-536 |
| Cow position: | chr2:82799552-82800086 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 278 |
| Conread position: | 1-551 |
| Cow position: | chr2:78755278-78755825 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 59 |
| Conread position: | 1-565 |
| Cow position: | chr2:78755445-78756009 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 75 |
| Conread position: | 1-566 |
| Cow position: | chr2:82799804-82800372 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 279 |
| Conread position: | 1-580 |
| Cow position: | chr2:78755361-78755938 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 450, 158 |
| Conread position: | 1-582 |
| Cow position: | chr2:78754454-78755020 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 360 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 180, 192 |
| Conread position: | 6-517 |
| Cow position: | chr2:86465129-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 320 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 187, 180 |
| Conread position: | 6-602 |
| Cow position: | chr2:78754627-78755205 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 377 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 21-391 |
| Cow position: | chr2:82800076-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 30-516 |
| Cow position: | chr2:78755891-78756375 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 223 |
| Conread position: | 36-366 |
| Cow position: | chr2:5874449-5874117 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 139, 162 |
| Conread position: | 36-511 |
| Cow position: | chr2:86465243-86465718 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 292 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 310, 332 |
| Conread position: | 38-440 |
| Cow position: | chr2:48689478-48689078 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 248, 85 |
| Conread position: | 38-535 |
| Cow position: | chr2:86465665-86466162 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 99, 89 |
| Conread position: | 40-551 |
| Cow position: | chr2:78754814-78755325 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 7 |
| Conread position: | 47-494 |
| Cow position: | chr2:78754166-78754611 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 139, 152 |
| Conread position: | 47-512 |
| Cow position: | chr2:78755824-78756290 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 244 |
| Conread position: | 47-521 |
| Cow position: | chr2:78754250-78754721 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 389, 193 |
| Conread position: | 47-574 |
| Cow position: | chr2:82799682-82800209 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 401 |
| Conread position: | 48-512 |
| Cow position: | chr2:86465087-86465551 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 162, 166 |
| Conread position: | 50-519 |
| Cow position: | chr2:86465509-86465978 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 50-521 |
| Cow position: | chr2:78754907-78755377 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 396 |
| Conread position: | 51-477 |
| Cow position: | chr2:82800022-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 51-550 |
| Cow position: | chr2:82799938-82800438 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 145 |
| Conread position: | 61-483 |
| Cow position: | chr2:5875180-5874758 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 228, 221 |
| Conread position: | 70-529 |
| Cow position: | chr2:82799453-82799912 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 118-632 |
| Cow position: | chr2:78754153-78754667 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 123-524 |
| Cow position: | chr2:86465078-86465479 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 144-524 |
| Cow position: | chr2:48689540-48689161 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 58, 48 |
Show alignments to all cow chromosomes.