Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053I23.5
        

               Conread position:
               1-318
               

               Cow position:
               chr21:34222858-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               203, 196
               

               Conread position:
               1-511
               

               Cow position:
               chr21:12608904-12608394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               305
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               266, 289
               

               Conread position:
               3-486
               

               Cow position:
               chr21:34223023-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               369, 8
               

               Conread position:
               30-490
               

               Cow position:
               chr21:12659223-12659683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               330, 337
               

               Conread position:
               69-542
               

               Cow position:
               chr21:34223042-34222569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 135
               

               Conread position:
               114-573
               

               Cow position:
               chr21:12608455-12607996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 81
               

               Conread position:
               119-538
               

               Cow position:
               chr21:34223076-34222658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               180, 175
               

               Conread position:
               135-472
               

               Cow position:
               chr21:12608266-12607929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               168-490
               

               Cow position:
               chr21:12608905-12608583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               268, 292
               

               Conread position:
               249-517
               

               Cow position:
               chr21:12608908-12608639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               264, 0
               
Show alignments to all cow chromosomes.