Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053I23.5 |
| Conread position: | 1-318 |
| Cow position: | chr24:17013189-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-406 |
| Cow position: | chr24:17070652-17071057 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-486 |
| Cow position: | chr24:17070568-17071053 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 282 |
| Conread position: | 1-495 |
| Cow position: | chr24:17077984-17077491 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 0 |
| Conread position: | 1-497 |
| Cow position: | chr24:17035429-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 482, 0 |
| Conread position: | 1-519 |
| Cow position: | chr24:17036353-17035835 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-551 |
| Cow position: | chr24:17036602-17036054 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 452, 53 |
| Conread position: | 1-551 |
| Cow position: | chr24:17078152-17077601 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 0 |
| Conread position: | 1-565 |
| Cow position: | chr24:17035933-17035366 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 540, 0 |
| Conread position: | 1-565 |
| Cow position: | chr24:17036101-17035534 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 537, 0 |
| Conread position: | 1-570 |
| Cow position: | chr24:17078236-17077666 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 371 |
| Conread position: | 1-602 |
| Cow position: | chr24:17035681-17035082 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 542, 562 |
| Conread position: | 1-616 |
| Cow position: | chr24:17035849-17035236 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 504, 497 |
| Conread position: | 1-616 |
| Cow position: | chr24:17036521-17035908 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 330 |
| Conread position: | 3-530 |
| Cow position: | chr24:17078066-17077539 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 369 |
| Conread position: | 5-572 |
| Cow position: | chr24:17035593-17035025 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 530, 515 |
| Conread position: | 6-574 |
| Cow position: | chr24:17036432-17035864 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 538, 554 |
| Conread position: | 6-615 |
| Cow position: | chr24:17036012-17035405 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 535, 562 |
| Conread position: | 30-536 |
| Cow position: | chr24:17035736-17035230 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 384 |
| Conread position: | 30-551 |
| Cow position: | chr24:17070513-17071035 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 483, 490 |
| Conread position: | 30-616 |
| Cow position: | chr24:17036240-17035656 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 31-574 |
| Cow position: | chr24:17036155-17035612 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 513, 529 |
| Conread position: | 40-549 |
| Cow position: | chr24:17070440-17070949 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 7 |
| Conread position: | 70-409 |
| Cow position: | chr24:17013174-17013513 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-288 |
| Cow position: | chr24:16986442-16986658 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-553 |
| Cow position: | chr24:17070351-17070783 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 130-564 |
| Cow position: | chr24:17078275-17077838 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 0 |
| Conread position: | 139-369 |
| Cow position: | chr24:16986425-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 139, 133 |
| Conread position: | 142-497 |
| Cow position: | chr24:17013162-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 146 |
| Conread position: | 211-565 |
| Cow position: | chr24:17013147-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 331, 0 |
| Conread position: | 223-446 |
| Cow position: | chr24:16986425-16986648 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 310-537 |
| Cow position: | chr24:16986428-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.