Cow genome map

Conread name: Ss1.1-Pig4-TMW8053I23.5

Conread position: 1-247
Cow position:
Alignm length: 247
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-268
Cow position:
Alignm length: 270
Alignm identity: 174
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 114

Conread position: 1-317
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-401
Cow position:
Alignm length: 401
Alignm identity: 256
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 346, 0

Conread position: 1-421
Cow position:
Alignm length: 422
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 99

Conread position: 1-507
Cow position:
Alignm length: 507
Alignm identity: 310
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 394, 0

Conread position: 1-529
Cow position:
Alignm length: 529
Alignm identity: 316
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 1-529
Cow position:
Alignm length: 529
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-551
Cow position:
Alignm length: 553
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 446

Conread position: 1-551
Cow position:
Alignm length: 553
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 278

Conread position: 1-577
Cow position:
Alignm length: 578
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 558, 69

Conread position: 1-581
Cow position:
Alignm length: 586
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 248

Conread position: 1-581
Cow position:
Alignm length: 583
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 540, 154

Conread position: 4-404
Cow position:
Alignm length: 405
Alignm identity: 254
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 98

Conread position: 7-415
Cow position:
Alignm length: 410
Alignm identity: 262
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 6, 0

Conread position: 23-565
Cow position:
Alignm length: 548
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 49

Conread position: 24-472
Cow position:
Alignm length: 451
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 268

Conread position: 24-537
Cow position:
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 72

Conread position: 24-602
Cow position:
Alignm length: 580
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 520, 536

Conread position: 24-619
Cow position:
Alignm length: 599
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 520, 370

Conread position: 30-602
Cow position:
Alignm length: 575
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 420

Conread position: 37-496
Cow position:
Alignm length: 461
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 56

Conread position: 38-401
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-488
Cow position:
Alignm length: 453
Alignm identity: 285
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 327, 290

Conread position: 38-520
Cow position:
Alignm length: 486
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 102

Conread position: 42-616
Cow position:
Alignm length: 577
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 232

Conread position: 45-355
Cow position:
Alignm length: 311
Alignm identity: 204
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 45-517
Cow position:
Alignm length: 474
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 469, 0

Conread position: 47-527
Cow position:
Alignm length: 485
Alignm identity: 295
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 227, 236

Conread position: 47-613
Cow position:
Alignm length: 570
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 513

Conread position: 48-596
Cow position:
Alignm length: 550
Alignm identity: 333
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 493, 512

Conread position: 48-602
Cow position:
Alignm length: 558
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 140

Conread position: 49-602
Cow position:
Alignm length: 559
Alignm identity: 336
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 52

Conread position: 51-435
Cow position:
Alignm length: 385
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 51-488
Cow position:
Alignm length: 438
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 0

Conread position: 51-488
Cow position:
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 223

Conread position: 51-505
Cow position:
Alignm length: 456
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 23

Conread position: 51-511
Cow position:
Alignm length: 461
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 51-512
Cow position:
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 236

Conread position: 51-530
Cow position:
Alignm length: 481
Alignm identity: 297
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 58, 50

Conread position: 51-530
Cow position:
Alignm length: 481
Alignm identity: 279
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 277, 273

Conread position: 51-551
Cow position:
Alignm length: 503
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 51

Conread position: 51-566
Cow position:
Alignm length: 521
Alignm identity: 316
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 215, 194

Conread position: 56-511
Cow position:
Alignm length: 458
Alignm identity: 286
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 175, 184

Conread position: 59-446
Cow position:
Alignm length: 389
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 334, 0

Conread position: 60-551
Cow position:
Alignm length: 494
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 227

Conread position: 63-530
Cow position:
Alignm length: 473
Alignm identity: 285
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 155, 13

Conread position: 69-518
Cow position:
Alignm length: 457
Alignm identity: 278
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 118, 126

Conread position: 79-499
Cow position:
Alignm length: 421
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 79-551
Cow position:
Alignm length: 475
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 105

Conread position: 108-602
Cow position:
Alignm length: 499
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 134-601
Cow position:
Alignm length: 477
Alignm identity: 306
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 82, 51

Conread position: 138-613
Cow position:
Alignm length: 483
Alignm identity: 302
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 136, 129

Conread position: 140-486
Cow position:
Alignm length: 348
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 152

Conread position: 140-578
Cow position:
Alignm length: 445
Alignm identity: 281
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 5, 100

Conread position: 142-523
Cow position:
Alignm length: 386
Alignm identity: 243
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 57

Conread position: 143-565
Cow position:
Alignm length: 427
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 131

Conread position: 145-497
Cow position:
Alignm length: 355
Alignm identity: 224
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 157, 144

Conread position: 146-598
Cow position:
Alignm length: 456
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 53

Conread position: 186-551
Cow position:
Alignm length: 373
Alignm identity: 249
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 97, 47

Show alignments to all cow chromosomes.