Cow genome map
Conread name: | Ss1.1-Pig4-TMW8053I23.5 |
Conread position: | 1-285 |
Cow position: | chr7:8325850-8326133 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 186 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 281, 0 |
Conread position: | 1-322 |
Cow position: | chr7:42878579-42878256 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 210 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 307, 0 |
Conread position: | 1-350 |
Cow position: | chr7:8243747-8244093 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 235 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 120, 105 |
Conread position: | 1-388 |
Cow position: | chr7:42878663-42878276 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 250 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-444 |
Cow position: | chr7:18390355-18390798 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 281 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 420, 411 |
Conread position: | 1-485 |
Cow position: | chr7:3180394-3180877 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 132 |
Conread position: | 1-495 |
Cow position: | chr7:8277957-8278451 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 310 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 38, 19 |
Conread position: | 1-512 |
Cow position: | chr7:8325178-8325689 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 111 |
Conread position: | 1-516 |
Cow position: | chr7:42879251-42878735 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 114 |
Conread position: | 1-519 |
Cow position: | chr7:8242824-8243342 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 327 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 203, 185 |
Conread position: | 1-519 |
Cow position: | chr7:8277873-8278391 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 118 |
Conread position: | 1-519 |
Cow position: | chr7:11600994-11600476 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 157 |
Conread position: | 1-521 |
Cow position: | chr7:8324758-8325278 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 206 |
Conread position: | 1-521 |
Cow position: | chr7:8324926-8325446 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 39 |
Conread position: | 1-521 |
Cow position: | chr7:8325598-8326118 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 131 |
Conread position: | 1-524 |
Cow position: | chr7:8277453-8277976 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 328 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 433, 458 |
Conread position: | 1-526 |
Cow position: | chr7:18390271-18390796 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 504, 492 |
Conread position: | 1-551 |
Cow position: | chr7:42878831-42878280 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 350, 375 |
Conread position: | 1-565 |
Cow position: | chr7:3180226-3180793 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 542, 0 |
Conread position: | 1-565 |
Cow position: | chr7:42878999-42878432 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 198 |
Conread position: | 1-566 |
Cow position: | chr7:1014298-1014860 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 538, 349 |
Conread position: | 1-581 |
Cow position: | chr7:11601078-11600497 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 537, 0 |
Conread position: | 1-600 |
Cow position: | chr7:42879083-42878486 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 540, 583 |
Conread position: | 1-601 |
Cow position: | chr7:8277705-8278303 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 132 |
Conread position: | 1-602 |
Cow position: | chr7:8242908-8243506 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 374 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 104, 116 |
Conread position: | 1-602 |
Cow position: | chr7:42879167-42878568 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 366 |
Conread position: | 1-615 |
Cow position: | chr7:1014466-1015072 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 184 |
Conread position: | 1-616 |
Cow position: | chr7:42878915-42878302 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 193 |
Conread position: | 1-618 |
Cow position: | chr7:1014796-1015411 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 540, 583 |
Conread position: | 1-618 |
Cow position: | chr7:3180142-3180757 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 453 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 541, 570 |
Conread position: | 1-619 |
Cow position: | chr7:1014712-1015328 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 540, 568 |
Conread position: | 1-619 |
Cow position: | chr7:3179974-3180590 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 520, 527 |
Conread position: | 1-624 |
Cow position: | chr7:1014880-1015503 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 546 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 542, 559 |
Conread position: | 1-632 |
Cow position: | chr7:8325430-8326063 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 15 |
Conread position: | 3-518 |
Cow position: | chr7:3179892-3180407 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-551 |
Cow position: | chr7:3180312-3180860 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 507, 485 |
Conread position: | 5-308 |
Cow position: | chr7:11434542-11434239 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 192 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-539 |
Cow position: | chr7:11601157-11600624 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-540 |
Cow position: | chr7:1014387-1014915 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 336, 271 |
Conread position: | 29-474 |
Cow position: | chr7:42878719-42878274 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 262, 250 |
Conread position: | 30-436 |
Cow position: | chr7:8243692-8244095 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 269 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 73, 91 |
Conread position: | 30-436 |
Cow position: | chr7:8278321-8278719 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 253 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 9, 123 |
Conread position: | 30-474 |
Cow position: | chr7:11600881-11600437 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 411, 387 |
Conread position: | 30-519 |
Cow position: | chr7:8243021-8243509 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 320 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 91, 102 |
Conread position: | 30-574 |
Cow position: | chr7:18390048-18390592 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 385, 391 |
Conread position: | 30-618 |
Cow position: | chr7:3180087-3180673 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 514, 530 |
Conread position: | 31-371 |
Cow position: | chr7:1439946-1440285 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 228 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 159, 25 |
Conread position: | 31-512 |
Cow position: | chr7:8243274-8243754 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 314 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 155, 107 |
Conread position: | 31-512 |
Cow position: | chr7:8243609-8244087 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 306 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 332, 345 |
Conread position: | 31-519 |
Cow position: | chr7:8277651-8278139 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 176 |
Conread position: | 38-512 |
Cow position: | chr7:1439786-1440258 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 38-517 |
Cow position: | chr7:1438227-1438707 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 304 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 62, 80 |
Conread position: | 39-600 |
Cow position: | chr7:3179844-3180403 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 500, 529 |
Conread position: | 44-519 |
Cow position: | chr7:8243454-8243929 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 309 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 84, 92 |
Conread position: | 44-523 |
Cow position: | chr7:11434748-11434276 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 306 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 81, 65 |
Conread position: | 47-539 |
Cow position: | chr7:11601283-11600792 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 70 |
Conread position: | 47-551 |
Cow position: | chr7:1439457-1439963 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 47 |
Conread position: | 47-565 |
Cow position: | chr7:1014674-1015195 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 77 |
Conread position: | 47-565 |
Cow position: | chr7:11601200-11600679 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 311, 297 |
Conread position: | 47-612 |
Cow position: | chr7:18390233-18390796 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 138 |
Conread position: | 47-618 |
Cow position: | chr7:18390149-18390718 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 56 |
Conread position: | 50-434 |
Cow position: | chr7:1439881-1440264 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 51-512 |
Cow position: | chr7:8278091-8278550 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 289 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 150, 157 |
Conread position: | 56-519 |
Cow position: | chr7:8277256-8277719 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 300 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 65, 51 |
Conread position: | 57-362 |
Cow position: | chr7:1438414-1438719 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 201 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 59, 46 |
Conread position: | 62-517 |
Cow position: | chr7:8324735-8325191 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 45 |
Conread position: | 63-540 |
Cow position: | chr7:3179700-3180177 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 67-582 |
Cow position: | chr7:42879437-42878921 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 327 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 42, 57 |
Conread position: | 69-551 |
Cow position: | chr7:1438092-1438573 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 290 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 223, 109 |
Conread position: | 69-602 |
Cow position: | chr7:11434807-11434283 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 339 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 140, 128 |
Conread position: | 70-618 |
Cow position: | chr7:1014283-1014823 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 443, 375 |
Conread position: | 75-512 |
Cow position: | chr7:42879261-42878824 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 124 |
Conread position: | 75-521 |
Cow position: | chr7:8242814-8243260 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 279 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 296, 302 |
Conread position: | 110-602 |
Cow position: | chr7:42879314-42878820 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 186 |
Conread position: | 118-541 |
Cow position: | chr7:1014079-1014502 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 254 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 130-578 |
Cow position: | chr7:1014673-1015121 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 411, 438 |
Conread position: | 131-511 |
Cow position: | chr7:1014260-1014640 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 305 |
Conread position: | 140-519 |
Cow position: | chr7:8324729-8325108 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 46 |
Conread position: | 145-615 |
Cow position: | chr7:18389995-18390463 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 306 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 47, 53 |
Conread position: | 156-602 |
Cow position: | chr7:3179709-3180153 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 364 |
Conread position: | 179-512 |
Cow position: | chr7:1014224-1014557 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 191-618 |
Cow position: | chr7:3179660-3180085 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 46 |
Conread position: | 206-519 |
Cow position: | chr7:1439448-1439765 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 211 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 229, 146 |
Conread position: | 224-574 |
Cow position: | chr7:8277256-8277606 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 218 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 69, 53 |
Conread position: | 233-512 |
Cow position: | chr7:8242804-8243083 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 177 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 645-1122 |
Cow position: | chr7:1015847-1016310 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 301 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 15, 45 |
Show alignments to all cow chromosomes.