Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053I23.5
        

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               281, 0
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               1-350
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               120, 105
               

               Conread position:
               1-388
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               250
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               281
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               420, 411
               

               Conread position:
               1-485
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 132
               

               Conread position:
               1-495
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               1-512
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 111
               

               Conread position:
               1-516
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 114
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               327
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               203, 185
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 118
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 157
               

               Conread position:
               1-521
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 206
               

               Conread position:
               1-521
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               1-521
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 131
               

               Conread position:
               1-524
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               328
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               433, 458
               

               Conread position:
               1-526
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               504, 492
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               350, 375
               

               Conread position:
               1-565
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               542, 0
               

               Conread position:
               1-565
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 198
               

               Conread position:
               1-566
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               538, 349
               

               Conread position:
               1-581
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               537, 0
               

               Conread position:
               1-600
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               540, 583
               

               Conread position:
               1-601
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 132
               

               Conread position:
               1-602
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               374
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               104, 116
               

               Conread position:
               1-602
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 366
               

               Conread position:
               1-615
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 184
               

               Conread position:
               1-616
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 193
               

               Conread position:
               1-618
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               540, 583
               

               Conread position:
               1-618
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               541, 570
               

               Conread position:
               1-619
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               540, 568
               

               Conread position:
               1-619
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               520, 527
               

               Conread position:
               1-624
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               542, 559
               

               Conread position:
               1-632
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               3-518
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-551
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               507, 485
               

               Conread position:
               5-308
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-539
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-540
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 271
               

               Conread position:
               29-474
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 250
               

               Conread position:
               30-436
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               73, 91
               

               Conread position:
               30-436
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               30-474
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               411, 387
               

               Conread position:
               30-519
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               320
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               91, 102
               

               Conread position:
               30-574
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               385, 391
               

               Conread position:
               30-618
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               514, 530
               

               Conread position:
               31-371
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               159, 25
               

               Conread position:
               31-512
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               314
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               155, 107
               

               Conread position:
               31-512
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               306
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               332, 345
               

               Conread position:
               31-519
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 176
               

               Conread position:
               38-512
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               38-517
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               304
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               62, 80
               

               Conread position:
               39-600
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               500, 529
               

               Conread position:
               44-519
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 92
               

               Conread position:
               44-523
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               81, 65
               

               Conread position:
               47-539
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 70
               

               Conread position:
               47-551
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               47-565
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 77
               

               Conread position:
               47-565
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 297
               

               Conread position:
               47-612
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 138
               

               Conread position:
               47-618
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 56
               

               Conread position:
               50-434
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               51-512
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               150, 157
               

               Conread position:
               56-519
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 51
               

               Conread position:
               57-362
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               62-517
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               63-540
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               67-582
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               327
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               69-551
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               223, 109
               

               Conread position:
               69-602
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               140, 128
               

               Conread position:
               70-618
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               443, 375
               

               Conread position:
               75-512
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 124
               

               Conread position:
               75-521
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               296, 302
               

               Conread position:
               110-602
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 186
               

               Conread position:
               118-541
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               130-578
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               411, 438
               

               Conread position:
               131-511
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 305
               

               Conread position:
               140-519
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 46
               

               Conread position:
               145-615
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               156-602
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 364
               

               Conread position:
               179-512
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-618
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               206-519
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               229, 146
               

               Conread position:
               224-574
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               233-512
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               645-1122
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 45
               
Show alignments to all cow chromosomes.