Cow genome map

Conread name: Ss1.1-Pig4-TMW8053I23.5

Conread position: 1-244
Cow position: chrX:25310335-25310578 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 185, 192

Conread position: 1-322
Cow position: chrX:25324554-25324233 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-390
Cow position: chrX:13826587-13826198 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 236
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 26

Conread position: 1-414
Cow position: chrX:29045067-29044654 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 193

Conread position: 1-486
Cow position: chrX:25324722-25324237 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 1-487
Cow position: chrX:13826923-13826437 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 290
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 112

Conread position: 1-499
Cow position: chrX:25325394-25324896 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-519
Cow position: chrX:25324974-25324456 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 291

Conread position: 1-519
Cow position: chrX:25325142-25324624 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 447

Conread position: 1-519
Cow position: chrX:29045718-29045221 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 320
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 281, 273

Conread position: 1-521
Cow position: chrX:12627547-12628067 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 310
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 206, 106

Conread position: 1-529
Cow position: chrX:13826755-13826227 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 314
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 93, 111

Conread position: 1-536
Cow position: chrX:25325226-25324692 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 531, 0

Conread position: 1-551
Cow position: chrX:25324806-25324255 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 111

Conread position: 1-551
Cow position: chrX:25325562-25325011 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 100

Conread position: 1-570
Cow position: chrX:29045235-29044664 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 540, 569

Conread position: 1-578
Cow position: chrX:25325478-25324901 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 524, 528

Conread position: 1-581
Cow position: chrX:25309831-25310412 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 448

Conread position: 1-582
Cow position: chrX:25325058-25324476 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 363

Conread position: 2-350
Cow position: chrX:29045801-29045453 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-602
Cow position: chrX:29045318-29044720 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 266

Conread position: 3-564
Cow position: chrX:25324888-25324326 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 193

Conread position: 3-616
Cow position: chrX:25325308-25324697 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 567

Conread position: 11-565
Cow position: chrX:25325636-25325079 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 437

Conread position: 24-565
Cow position: chrX:25325707-25325163 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 514, 507

Conread position: 24-582
Cow position: chrX:25309938-25310497 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 171

Conread position: 30-318
Cow position: chrX:25310280-25310568 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 167

Conread position: 30-598
Cow position: chrX:25309776-25310342 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 164

Conread position: 35-600
Cow position: chrX:29045366-29044806 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 38

Conread position: 37-598
Cow position: chrX:25309699-25310258 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 203

Conread position: 38-421
Cow position: chrX:25310204-25310586 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 252

Conread position: 39-626
Cow position: chrX:25325776-25325189 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 408

Conread position: 47-498
Cow position: chrX:29045105-29044654 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 398

Conread position: 47-505
Cow position: chrX:25310129-25310586 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 150

Conread position: 47-565
Cow position: chrX:25310045-25310566 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 407

Conread position: 50-506
Cow position: chrX:12627345-12627799 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 291
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 157, 146

Conread position: 50-507
Cow position: chrX:29045837-29045380 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 389

Conread position: 59-523
Cow position: chrX:12627270-12627732 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 282
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 305, 221

Conread position: 75-490
Cow position: chrX:13826933-13826518 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 259
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 108, 122

Conread position: 114-424
Cow position: chrX:14181252-14180942 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 85

Conread position: 119-566
Cow position: chrX:29045852-29045404 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 65, 76

Conread position: 127-598
Cow position: chrX:25309705-25310174 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 142

Show alignments to all cow chromosomes.