Cow genome map
Conread name: | Ss1.1-Pig4-TMW8053I23.5 |
Conread position: | 1-244 |
Cow position: | chrX:25310335-25310578 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 160 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 185, 192 |
Conread position: | 1-322 |
Cow position: | chrX:25324554-25324233 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 204 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-390 |
Cow position: | chrX:13826587-13826198 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 236 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 39, 26 |
Conread position: | 1-414 |
Cow position: | chrX:29045067-29044654 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 193 |
Conread position: | 1-486 |
Cow position: | chrX:25324722-25324237 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 28 |
Conread position: | 1-487 |
Cow position: | chrX:13826923-13826437 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 290 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 99, 112 |
Conread position: | 1-499 |
Cow position: | chrX:25325394-25324896 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-519 |
Cow position: | chrX:25324974-25324456 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 291 |
Conread position: | 1-519 |
Cow position: | chrX:25325142-25324624 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 453, 447 |
Conread position: | 1-519 |
Cow position: | chrX:29045718-29045221 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 320 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 281, 273 |
Conread position: | 1-521 |
Cow position: | chrX:12627547-12628067 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 310 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 206, 106 |
Conread position: | 1-529 |
Cow position: | chrX:13826755-13826227 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 314 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 93, 111 |
Conread position: | 1-536 |
Cow position: | chrX:25325226-25324692 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 531, 0 |
Conread position: | 1-551 |
Cow position: | chrX:25324806-25324255 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 111 |
Conread position: | 1-551 |
Cow position: | chrX:25325562-25325011 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 100 |
Conread position: | 1-570 |
Cow position: | chrX:29045235-29044664 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 540, 569 |
Conread position: | 1-578 |
Cow position: | chrX:25325478-25324901 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 524, 528 |
Conread position: | 1-581 |
Cow position: | chrX:25309831-25310412 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 437, 448 |
Conread position: | 1-582 |
Cow position: | chrX:25325058-25324476 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 369, 363 |
Conread position: | 2-350 |
Cow position: | chrX:29045801-29045453 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-602 |
Cow position: | chrX:29045318-29044720 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 266 |
Conread position: | 3-564 |
Cow position: | chrX:25324888-25324326 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 193 |
Conread position: | 3-616 |
Cow position: | chrX:25325308-25324697 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 538, 567 |
Conread position: | 11-565 |
Cow position: | chrX:25325636-25325079 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 443, 437 |
Conread position: | 24-565 |
Cow position: | chrX:25325707-25325163 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 514, 507 |
Conread position: | 24-582 |
Cow position: | chrX:25309938-25310497 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 171 |
Conread position: | 30-318 |
Cow position: | chrX:25310280-25310568 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 167 |
Conread position: | 30-598 |
Cow position: | chrX:25309776-25310342 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 164 |
Conread position: | 35-600 |
Cow position: | chrX:29045366-29044806 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 38 |
Conread position: | 37-598 |
Cow position: | chrX:25309699-25310258 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 203 |
Conread position: | 38-421 |
Cow position: | chrX:25310204-25310586 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 252 |
Conread position: | 39-626 |
Cow position: | chrX:25325776-25325189 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 415, 408 |
Conread position: | 47-498 |
Cow position: | chrX:29045105-29044654 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 391, 398 |
Conread position: | 47-505 |
Cow position: | chrX:25310129-25310586 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 150 |
Conread position: | 47-565 |
Cow position: | chrX:25310045-25310566 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 388, 407 |
Conread position: | 50-506 |
Cow position: | chrX:12627345-12627799 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 291 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 157, 146 |
Conread position: | 50-507 |
Cow position: | chrX:29045837-29045380 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 401, 389 |
Conread position: | 59-523 |
Cow position: | chrX:12627270-12627732 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 282 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 305, 221 |
Conread position: | 75-490 |
Cow position: | chrX:13826933-13826518 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 259 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 108, 122 |
Conread position: | 114-424 |
Cow position: | chrX:14181252-14180942 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 199 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 81, 85 |
Conread position: | 119-566 |
Cow position: | chrX:29045852-29045404 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 290 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 65, 76 |
Conread position: | 127-598 |
Cow position: | chrX:25309705-25310174 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 142 |
Show alignments to all cow chromosomes.