Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 2-233
Cow position: chr1:52004911-52005151 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 83

Conread position: 2-243
Cow position: chr1:30578399-30578163 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 58

Conread position: 2-261
Cow position: chr1:5810986-5811250 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 57

Conread position: 2-261
Cow position: chr1:27341510-27341255 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 189, 46

Conread position: 2-266
Cow position: chr1:23362424-23362151 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 81

Conread position: 2-267
Cow position: chr1:3011764-3012025 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 47

Conread position: 2-267
Cow position: chr1:64462401-64462658 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 62

Conread position: 2-267
Cow position: chr1:82389555-82389831 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 2-273
Cow position: chr1:81308279-81308011 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 186, 55

Conread position: 2-286
Cow position: chr1:62776578-62776289 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 70

Conread position: 2-288
Cow position: chr1:97061844-97062118 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 62

Conread position: 2-289
Cow position: chr1:18595931-18595643 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 56

Conread position: 3-267
Cow position: chr1:37332474-37332737 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 61

Conread position: 3-285
Cow position: chr1:44013064-44013350 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 187
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 185, 64

Conread position: 3-293
Cow position: chr1:96530832-96530545 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 63

Conread position: 3-307
Cow position: chr1:71020704-71021006 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 61

Conread position: 4-270
Cow position: chr1:62755381-62755116 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 59

Conread position: 5-267
Cow position: chr1:18283040-18282772 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 58

Conread position: 5-267
Cow position: chr1:40479569-40479823 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 64

Conread position: 5-271
Cow position: chr1:81541001-81540743 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 183, 21

Conread position: 6-256
Cow position: chr1:43525082-43525337 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 60

Conread position: 7-251
Cow position: chr1:81664447-81664692 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 56

Conread position: 8-263
Cow position: chr1:32625292-32625036 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 18

Conread position: 8-267
Cow position: chr1:61659593-61659851 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 183, 23

Conread position: 8-267
Cow position: chr1:82378583-82378323 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 183, 18

Conread position: 9-267
Cow position: chr1:44083859-44083599 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 52

Conread position: 9-279
Cow position: chr1:89356121-89355851 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 32, 13

Conread position: 11-263
Cow position: chr1:86543917-86544166 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr1:831195-831448 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr1:1023021-1023274 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 57

Conread position: 11-267
Cow position: chr1:1028414-1028161 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 57

Conread position: 11-267
Cow position: chr1:4368299-4368552 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 53

Conread position: 11-267
Cow position: chr1:47634656-47634909 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 46

Conread position: 11-267
Cow position: chr1:52390817-52391069 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 6

Conread position: 11-267
Cow position: chr1:65480999-65480746 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr1:82908781-82909034 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 53

Conread position: 11-267
Cow position: chr1:85795994-85795741 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr1:94879036-94879289 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 53

Conread position: 11-278
Cow position: chr1:53579098-53578835 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 194, 37

Conread position: 12-252
Cow position: chr1:84255539-84255306 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 15

Conread position: 12-265
Cow position: chr1:37556476-37556218 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 52

Conread position: 12-265
Cow position: chr1:55585811-55586069 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 15

Conread position: 12-266
Cow position: chr1:31341269-31341521 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 52

Conread position: 12-266
Cow position: chr1:77620335-77620080 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 53

Conread position: 12-267
Cow position: chr1:1981325-1981578 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 32

Conread position: 12-267
Cow position: chr1:4374554-4374799 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 14

Conread position: 12-267
Cow position: chr1:41004582-41004832 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 204, 36

Conread position: 12-267
Cow position: chr1:55020272-55020014 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 13

Conread position: 12-267
Cow position: chr1:55163707-55163459 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 52

Conread position: 12-267
Cow position: chr1:57305617-57305367 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 67, 36

Conread position: 12-267
Cow position: chr1:61724240-61724486 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 47

Conread position: 12-267
Cow position: chr1:71691599-71691347 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 55

Conread position: 12-267
Cow position: chr1:81180195-81180448 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 75

Conread position: 13-263
Cow position: chr1:86511945-86511700 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 186, 31

Conread position: 13-264
Cow position: chr1:70828698-70828445 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 152

Conread position: 16-267
Cow position: chr1:78920968-78921215 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 48

Conread position: 16-267
Cow position: chr1:89089495-89089743 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 189, 32

Conread position: 17-247
Cow position: chr1:76859993-76860217 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 50

Conread position: 17-267
Cow position: chr1:8517030-8517277 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr1:15417795-15418042 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 31

Conread position: 17-267
Cow position: chr1:21079399-21079646 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 31

Conread position: 17-267
Cow position: chr1:52068554-52068307 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 31

Conread position: 17-267
Cow position: chr1:53015846-53015599 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr1:56619754-56620001 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 47

Conread position: 17-267
Cow position: chr1:69513389-69513636 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr1:76485770-76486013 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 188, 17

Conread position: 18-267
Cow position: chr1:4218324-4218572 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 46

Conread position: 18-267
Cow position: chr1:18196635-18196389 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 46

Conread position: 18-267
Cow position: chr1:47653534-47653776 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 181, 16

Conread position: 31-267
Cow position: chr1:15385895-15386125 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 174, 34

Conread position: 31-267
Cow position: chr1:71558726-71558956 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 174, 30

Conread position: 31-267
Cow position: chr1:79419297-79419534 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 47

Conread position: 31-268
Cow position: chr1:85325556-85325329 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 33-267
Cow position: chr1:30312449-30312221 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 172, 28

Conread position: 34-260
Cow position: chr1:79916658-79916880 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 171, 26

Conread position: 34-267
Cow position: chr1:475899-475672 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:2990504-2990277 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:3931619-3931846 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:7161798-7162025 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:8345386-8345613 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:16373069-16372842 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:17058150-17058377 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 180, 27

Conread position: 34-267
Cow position: chr1:17450407-17450634 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:21420637-21420864 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:22546833-22546606 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 182, 31

Conread position: 34-267
Cow position: chr1:22685811-22685584 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:31405772-31405545 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:33464251-33464478 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:34534262-34534035 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 182, 31

Conread position: 34-267
Cow position: chr1:34820951-34820724 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:36706417-36706644 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:39160651-39160878 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:39234485-39234713 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 164, 27

Conread position: 34-267
Cow position: chr1:40766772-40766545 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:42713821-42714047 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 165, 31

Conread position: 34-267
Cow position: chr1:43144234-43144007 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:46121865-46122092 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:48735955-48735728 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:50687744-50687517 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:51732307-51732534 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position: chr1:56667121-56666894 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:56720480-56720707 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:61493820-61493593 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:62529763-62529990 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:62530573-62530346 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:63583093-63583320 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 182, 27

Conread position: 34-267
Cow position: chr1:64818130-64818357 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 181, 25

Conread position: 34-267
Cow position: chr1:65021562-65021335 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:68097135-68097362 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:68144950-68145177 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:70533104-70532877 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr1:70897764-70897537 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:71123618-71123845 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:72963074-72963301 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 171, 25

Conread position: 34-267
Cow position: chr1:74513122-74513349 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:80130636-80130409 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:82482100-82482327 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:84284724-84284497 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:87565270-87565043 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:89234012-89234239 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:89792535-89792762 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr1:99398637-99398410 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 181, 31

Conread position: 34-267
Cow position: chr1:102743893-102743667 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 171, 10

Conread position: 43-268
Cow position: chr1:9015923-9015702 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 5

Conread position: 68-267
Cow position: chr1:97276610-97276814 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 108

Conread position: 81-261
Cow position: chr1:52955937-52955759 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 134, 67

Conread position: 81-263
Cow position: chr1:80877646-80877454 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 81-267
Cow position: chr1:1743577-1743769 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 81-267
Cow position: chr1:8402450-8402265 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr1:13298512-13298328 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 71

Conread position: 81-267
Cow position: chr1:14528482-14528674 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 169

Conread position: 81-267
Cow position: chr1:19517455-19517639 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 128, 22

Conread position: 81-267
Cow position: chr1:25241265-25241082 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 136, 92

Conread position: 81-267
Cow position: chr1:31662293-31662108 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr1:39687244-39687060 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr1:42316644-42316835 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 81-267
Cow position: chr1:53397702-53397517 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 118, 92

Conread position: 81-267
Cow position: chr1:53564418-53564233 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 29

Conread position: 81-267
Cow position: chr1:53650625-53650440 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 92

Conread position: 81-267
Cow position: chr1:59019491-59019307 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 85

Conread position: 81-267
Cow position: chr1:62507266-62507451 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 136, 92

Conread position: 81-267
Cow position: chr1:68052508-68052693 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr1:76095942-76095751 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 81-267
Cow position: chr1:95071426-95071239 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 104

Conread position: 81-267
Cow position: chr1:99209805-99209995 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 81-269
Cow position: chr1:50275858-50275667 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 113, 22

Conread position: 81-270
Cow position: chr1:57329399-57329588 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 107, 77

Conread position: 81-271
Cow position: chr1:62263074-62263265 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 38

Conread position: 81-271
Cow position: chr1:70769961-70770148 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 134, 114

Conread position: 81-293
Cow position: chr1:51843939-51844156 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 193

Conread position: 82-267
Cow position: chr1:52507645-52507828 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 101

Conread position: 83-267
Cow position: chr1:10519471-10519288 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 90

Conread position: 83-267
Cow position: chr1:68821148-68821331 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 132, 90

Conread position: 83-267
Cow position: chr1:78558404-78558221 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr1:86372061-86372244 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 90

Conread position: 86-267
Cow position: chr1:56669338-56669523 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 25

Conread position: 87-267
Cow position: chr1:12374331-12374510 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 86

Conread position: 88-267
Cow position: chr1:59247819-59248002 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 95, 60

Conread position: 91-267
Cow position: chr1:31815137-31814958 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 18

Conread position: 91-267
Cow position: chr1:65144764-65144944 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 82

Show alignments to all cow chromosomes.