Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 1-266
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 123

Conread position: 1-267
Cow position:
Alignm length: 279
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 181, 28

Conread position: 2-223
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 197, 46

Conread position: 2-263
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 62

Conread position: 2-264
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 66

Conread position: 2-266
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 71

Conread position: 2-266
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 63

Conread position: 2-266
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 60

Conread position: 2-267
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 66

Conread position: 2-267
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 62

Conread position: 2-267
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 62

Conread position: 2-267
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 24

Conread position: 2-267
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 60

Conread position: 2-267
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 147, 32

Conread position: 2-267
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 2-272
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 149, 32

Conread position: 2-274
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 197, 51

Conread position: 2-291
Cow position:
Alignm length: 291
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 134

Conread position: 3-265
Cow position:
Alignm length: 270
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 54

Conread position: 3-265
Cow position:
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 15

Conread position: 3-299
Cow position:
Alignm length: 308
Alignm identity: 204
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 65

Conread position: 3-307
Cow position:
Alignm length: 310
Alignm identity: 205
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 185, 45

Conread position: 4-266
Cow position:
Alignm length: 269
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 59

Conread position: 4-284
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 60

Conread position: 5-251
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 81

Conread position: 5-267
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 54

Conread position: 6-267
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 56

Conread position: 6-270
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 71

Conread position: 8-267
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 12

Conread position: 9-265
Cow position:
Alignm length: 264
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 168

Conread position: 9-266
Cow position:
Alignm length: 265
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 55

Conread position: 9-267
Cow position:
Alignm length: 266
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 58

Conread position: 11-263
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position:
Alignm length: 261
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position:
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 53

Conread position: 11-267
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 194, 37

Conread position: 11-267
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 53

Conread position: 12-263
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 36

Conread position: 12-266
Cow position:
Alignm length: 263
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 40

Conread position: 12-267
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 36

Conread position: 12-267
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 158

Conread position: 12-267
Cow position:
Alignm length: 257
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 203, 24

Conread position: 12-267
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 37

Conread position: 12-267
Cow position:
Alignm length: 257
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 204, 32

Conread position: 12-267
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 166, 36

Conread position: 12-267
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 12-267
Cow position:
Alignm length: 260
Alignm identity: 171
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 52

Conread position: 12-267
Cow position:
Alignm length: 259
Alignm identity: 181
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 8

Conread position: 12-270
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 140

Conread position: 12-283
Cow position:
Alignm length: 280
Alignm identity: 182
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 44

Conread position: 14-261
Cow position:
Alignm length: 250
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 171, 34

Conread position: 17-260
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 48

Conread position: 17-267
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position:
Alignm length: 253
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position:
Alignm length: 253
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 47

Conread position: 17-267
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 47

Conread position: 17-267
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 48

Conread position: 17-267
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 188, 17

Conread position: 17-267
Cow position:
Alignm length: 254
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position:
Alignm length: 253
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 188, 31

Conread position: 18-267
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 30

Conread position: 18-267
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 16

Conread position: 21-268
Cow position:
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 48

Conread position: 26-267
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 34

Conread position: 31-267
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 174, 30

Conread position: 34-266
Cow position:
Alignm length: 234
Alignm identity: 157
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 25

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 26

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 140

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 182, 31

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 175, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 182, 27

Conread position: 34-267
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 26

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 171, 26

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 168, 27

Conread position: 34-267
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 35-267
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 170, 26

Conread position: 78-267
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 103, 161

Conread position: 78-267
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 17

Conread position: 80-251
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 5

Conread position: 80-269
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 109, 68

Conread position: 81-251
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 81-262
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 134, 92

Conread position: 81-263
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 97

Conread position: 81-265
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 81-266
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 135, 84

Conread position: 81-267
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 135, 92

Conread position: 81-267
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 110, 15

Conread position: 81-267
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 93

Conread position: 81-267
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 92

Conread position: 81-267
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 136, 92

Conread position: 81-267
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 136, 92

Conread position: 81-267
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 80

Conread position: 81-267
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-268
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-269
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-270
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 72

Conread position: 81-270
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 68

Conread position: 81-274
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 195

Conread position: 82-267
Cow position:
Alignm length: 187
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 91

Conread position: 82-267
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 83-265
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 132, 114

Conread position: 83-266
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 122

Conread position: 83-267
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 83-267
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 100, 156

Conread position: 83-267
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 82

Conread position: 83-267
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 90

Conread position: 83-270
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 68

Conread position: 91-267
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 86

Conread position: 94-295
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 103-272
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 85, 55

Conread position: 104-267
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 65

Show alignments to all cow chromosomes.