Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 2-249
Cow position: chr13:16988701-16988949 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 183, 48

Conread position: 2-266
Cow position: chr13:54071627-54071880 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 200, 14

Conread position: 2-267
Cow position: chr13:48660215-48659947 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 196, 56

Conread position: 2-268
Cow position: chr13:38727304-38727036 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 186, 46

Conread position: 2-291
Cow position: chr13:40463732-40464020 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 192, 16

Conread position: 2-307
Cow position: chr13:19113658-19113948 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 214, 73

Conread position: 3-264
Cow position: chr13:32803183-32803439 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 191, 55

Conread position: 3-266
Cow position: chr13:21856119-21855863 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 70

Conread position: 3-267
Cow position: chr13:47473133-47473396 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 31

Conread position: 3-267
Cow position: chr13:57314891-57314626 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 199, 13

Conread position: 3-285
Cow position: chr13:2475964-2475681 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 61

Conread position: 4-265
Cow position: chr13:4045699-4045437 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 37

Conread position: 5-218
Cow position: chr13:51304197-51304410 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 74

Conread position: 5-222
Cow position: chr13:18836270-18836053 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 195, 43

Conread position: 5-264
Cow position: chr13:17873473-17873736 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 80

Conread position: 5-267
Cow position: chr13:1011532-1011791 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 59

Conread position: 5-267
Cow position: chr13:42085010-42085272 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 43

Conread position: 5-285
Cow position: chr13:41360993-41361274 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 15

Conread position: 5-297
Cow position: chr13:44161284-44161575 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 183, 42

Conread position: 7-267
Cow position: chr13:22962934-22962671 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 158, 42

Conread position: 8-267
Cow position: chr13:9692753-9693011 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 163, 40

Conread position: 8-267
Cow position: chr13:12233254-12232993 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 54

Conread position: 8-270
Cow position: chr13:26383028-26382759 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 116, 40

Conread position: 11-263
Cow position: chr13:22790119-22790370 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 54

Conread position: 11-267
Cow position: chr13:18055041-18054788 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 194, 37

Conread position: 11-267
Cow position: chr13:18534228-18533975 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr13:18908244-18908495 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 191, 39

Conread position: 11-267
Cow position: chr13:35541186-35540933 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 53

Conread position: 12-267
Cow position: chr13:51901819-51902075 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 52

Conread position: 14-267
Cow position: chr13:7663221-7662974 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 35

Conread position: 14-267
Cow position: chr13:12977772-12978013 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 200, 13

Conread position: 17-267
Cow position: chr13:4615785-4615538 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 51

Conread position: 17-267
Cow position: chr13:27416847-27417094 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 42

Conread position: 17-267
Cow position: chr13:49446535-49446288 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr13:50440049-50440296 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 47

Conread position: 18-267
Cow position: chr13:43892596-43892353 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 17

Conread position: 18-267
Cow position: chr13:51481064-51481306 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 54

Conread position: 34-266
Cow position: chr13:6343638-6343415 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 28

Conread position: 34-266
Cow position: chr13:41113995-41113755 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 34-267
Cow position: chr13:3353759-3353531 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 182, 27

Conread position: 34-267
Cow position: chr13:8010347-8010120 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 182, 31

Conread position: 34-267
Cow position: chr13:8301314-8301087 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr13:13776720-13776493 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr13:14033818-14034045 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr13:14551372-14551599 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr13:15538228-15538454 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr13:16092038-16092263 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr13:16808341-16808114 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 181, 25

Conread position: 34-267
Cow position: chr13:23456862-23456634 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 183, 25

Conread position: 34-267
Cow position: chr13:26161248-26161021 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr13:45934383-45934156 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr13:47022940-47023167 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr13:50618506-50618733 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr13:52276182-52275955 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 78-270
Cow position: chr13:33923778-33923967 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 60

Conread position: 80-267
Cow position: chr13:971623-971437 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 93

Conread position: 80-267
Cow position: chr13:46284323-46284130 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 14

Conread position: 81-256
Cow position: chr13:59317141-59317317 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 21

Conread position: 81-260
Cow position: chr13:33695319-33695138 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 75

Conread position: 81-263
Cow position: chr13:21210203-21210383 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 133, 22

Conread position: 81-265
Cow position: chr13:14409830-14409642 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 81-267
Cow position: chr13:17567714-17567530 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 30

Conread position: 81-267
Cow position: chr13:20491873-20492070 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 36, 134

Conread position: 81-267
Cow position: chr13:20930708-20930893 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr13:25849107-25848922 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr13:26098416-26098601 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr13:28130309-28130494 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr13:32826133-32825948 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 92

Conread position: 81-267
Cow position: chr13:41608101-41607909 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 81-267
Cow position: chr13:44323253-44323437 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr13:47509858-47509673 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr13:53052553-53052368 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr13:54068629-54068437 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 81-267
Cow position: chr13:57565026-57564838 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 123

Conread position: 81-270
Cow position: chr13:18197247-18197439 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 65

Conread position: 81-285
Cow position: chr13:57430995-57431205 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 81-286
Cow position: chr13:11319687-11319477 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 194

Conread position: 83-266
Cow position: chr13:24156145-24156326 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 69

Conread position: 83-267
Cow position: chr13:19229477-19229660 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 119, 90

Conread position: 83-267
Cow position: chr13:24099711-24099528 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 132, 90

Conread position: 83-267
Cow position: chr13:25656048-25655861 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 92

Conread position: 83-267
Cow position: chr13:41565275-41565463 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 142

Conread position: 83-267
Cow position: chr13:54975529-54975346 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 90

Conread position: 88-297
Cow position: chr13:25082171-25082385 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 85

Conread position: 117-267
Cow position: chr13:52077514-52077361 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.