Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 2-251
Cow position: chr15:7446837-7447084 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 16

Conread position: 2-259
Cow position: chr15:13791621-13791360 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 60

Conread position: 2-264
Cow position: chr15:6036403-6036667 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 157, 24

Conread position: 2-265
Cow position: chr15:8003713-8003972 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 186, 56

Conread position: 2-265
Cow position: chr15:13943498-13943765 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 62

Conread position: 2-265
Cow position: chr15:17695311-17695046 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 64

Conread position: 2-266
Cow position: chr15:9439252-9438989 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 57

Conread position: 2-266
Cow position: chr15:16303345-16303609 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 46

Conread position: 2-267
Cow position: chr15:23103531-23103270 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 189, 46

Conread position: 2-267
Cow position: chr15:32976354-32976617 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 32, 62

Conread position: 2-267
Cow position: chr15:49073839-49073583 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 68

Conread position: 2-274
Cow position: chr15:47886421-47886685 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 3-185
Cow position: chr15:22728074-22727894 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 58

Conread position: 3-267
Cow position: chr15:3734442-3734699 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 8

Conread position: 3-270
Cow position: chr15:23528935-23529205 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 58

Conread position: 4-266
Cow position: chr15:8271999-8272267 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 55

Conread position: 4-266
Cow position: chr15:13676915-13676656 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 77

Conread position: 5-293
Cow position: chr15:9038243-9038532 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 57

Conread position: 6-267
Cow position: chr15:43756492-43756749 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 11

Conread position: 8-266
Cow position: chr15:7554291-7554035 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 13

Conread position: 11-267
Cow position: chr15:25539928-25540181 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 57

Conread position: 12-266
Cow position: chr15:33511155-33511406 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 52

Conread position: 12-267
Cow position: chr15:5234693-5234443 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 14

Conread position: 12-267
Cow position: chr15:5912918-5913188 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 12-267
Cow position: chr15:10442280-10442029 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 203, 36

Conread position: 12-267
Cow position: chr15:23775650-23775389 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 52

Conread position: 12-267
Cow position: chr15:24044787-24044529 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 53

Conread position: 12-267
Cow position: chr15:24968098-24968350 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 52

Conread position: 12-267
Cow position: chr15:26079060-26078805 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 53

Conread position: 12-267
Cow position: chr15:42143164-42143412 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 10

Conread position: 12-271
Cow position: chr15:33676433-33676696 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 47

Conread position: 12-273
Cow position: chr15:30985486-30985227 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 52

Conread position: 13-267
Cow position: chr15:15041123-15040874 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 36

Conread position: 13-267
Cow position: chr15:34206885-34206638 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 7

Conread position: 14-267
Cow position: chr15:22561622-22561369 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 58

Conread position: 17-267
Cow position: chr15:5479785-5480032 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr15:6015421-6015668 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 46

Conread position: 17-267
Cow position: chr15:16738134-16738381 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position: chr15:22544981-22545228 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 42

Conread position: 17-267
Cow position: chr15:22811841-22812088 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 47

Conread position: 17-267
Cow position: chr15:45707950-45707703 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 31

Conread position: 18-267
Cow position: chr15:7271996-7271746 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 50

Conread position: 18-267
Cow position: chr15:15343458-15343703 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 197, 30

Conread position: 18-267
Cow position: chr15:17033985-17034231 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 41

Conread position: 33-267
Cow position: chr15:25164470-25164698 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 172, 28

Conread position: 34-267
Cow position: chr15:28676-28903 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr15:63086-62859 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr15:488642-488869 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr15:2591025-2590798 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 182, 31

Conread position: 34-267
Cow position: chr15:2643715-2643942 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 181, 31

Conread position: 34-267
Cow position: chr15:3793919-3793692 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 171, 32

Conread position: 34-267
Cow position: chr15:5213359-5213586 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr15:7268229-7268002 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr15:15138928-15139155 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr15:16800093-16800320 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr15:20015517-20015744 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr15:21637906-21637679 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position: chr15:24088535-24088308 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr15:25181198-25181425 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr15:29018221-29017994 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 25

Conread position: 34-267
Cow position: chr15:32292761-32292988 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr15:33258371-33258598 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 182, 31

Conread position: 34-267
Cow position: chr15:34064577-34064348 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr15:39560509-39560282 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 25

Conread position: 34-267
Cow position: chr15:41105411-41105638 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr15:50142892-50142665 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr15:52758187-52758414 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr15:53053709-53053482 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-268
Cow position: chr15:30047200-30046973 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 181, 26

Conread position: 78-267
Cow position: chr15:6321237-6321049 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 54

Conread position: 81-265
Cow position: chr15:24822005-24821817 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 97

Conread position: 81-267
Cow position: chr15:1653563-1653378 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 136, 92

Conread position: 81-267
Cow position: chr15:2796925-2796740 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr15:13669526-13669342 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 134, 22

Conread position: 81-267
Cow position: chr15:14577840-14578025 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr15:17674312-17674121 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 81-267
Cow position: chr15:19326454-19326645 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 95

Conread position: 81-267
Cow position: chr15:33681035-33681221 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 161

Conread position: 81-267
Cow position: chr15:41087485-41087301 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 135, 92

Conread position: 81-269
Cow position: chr15:1329728-1329540 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 102

Conread position: 81-269
Cow position: chr15:17073772-17073960 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-275
Cow position: chr15:10839554-10839358 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 119, 92

Conread position: 81-278
Cow position: chr15:35052618-35052819 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 81-289
Cow position: chr15:29910848-29910634 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 129

Conread position: 83-267
Cow position: chr15:7942005-7941822 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr15:14856070-14855887 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 131, 90

Conread position: 83-267
Cow position: chr15:16927672-16927488 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 101

Conread position: 83-267
Cow position: chr15:22095490-22095670 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 125, 90

Conread position: 83-267
Cow position: chr15:39406340-39406523 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 132, 82

Conread position: 87-267
Cow position: chr15:24098157-24097975 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 49

Conread position: 91-267
Cow position: chr15:26922011-26921833 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 82

Conread position: 107-266
Cow position: chr15:5883616-5883458 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 93

Conread position: 108-267
Cow position: chr15:50947474-50947641 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.