Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 2-236
Cow position: chr17:26762171-26762405 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 46

Conread position: 2-241
Cow position: chr17:19025104-19025340 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 57

Conread position: 2-263
Cow position: chr17:42662707-42662962 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 48

Conread position: 2-264
Cow position: chr17:12220860-12220593 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 160

Conread position: 2-267
Cow position: chr17:3549333-3549607 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 72

Conread position: 2-267
Cow position: chr17:9742927-9742663 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 62

Conread position: 2-267
Cow position: chr17:26476977-26476718 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 75

Conread position: 2-267
Cow position: chr17:30753221-30753485 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 70

Conread position: 2-267
Cow position: chr17:32292916-32293182 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 58

Conread position: 2-267
Cow position: chr17:34779883-34779617 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 61

Conread position: 2-267
Cow position: chr17:41919872-41919610 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 192, 73

Conread position: 2-271
Cow position: chr17:18628053-18627790 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 29

Conread position: 2-276
Cow position: chr17:5358367-5358635 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 185, 56

Conread position: 2-288
Cow position: chr17:874394-874677 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 168, 46

Conread position: 2-295
Cow position: chr17:28232619-28232914 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 46

Conread position: 4-288
Cow position: chr17:30810729-30810442 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 60

Conread position: 5-265
Cow position: chr17:23803294-23803030 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 56

Conread position: 6-267
Cow position: chr17:7585294-7585037 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 11

Conread position: 6-267
Cow position: chr17:31077204-31076948 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 5

Conread position: 7-267
Cow position: chr17:35440804-35441071 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 242

Conread position: 7-269
Cow position: chr17:9818669-9818943 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 67

Conread position: 7-282
Cow position: chr17:31427616-31427331 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 77

Conread position: 8-224
Cow position: chr17:26771947-26771730 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 64

Conread position: 8-266
Cow position: chr17:12289592-12289851 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 57

Conread position: 8-267
Cow position: chr17:11767998-11767736 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 163, 40

Conread position: 11-198
Cow position: chr17:9903756-9903572 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 15

Conread position: 11-266
Cow position: chr17:3050194-3049935 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 37

Conread position: 11-267
Cow position: chr17:76895-77148 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 57

Conread position: 11-267
Cow position: chr17:7396421-7396676 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 56

Conread position: 11-267
Cow position: chr17:8214108-8213855 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr17:25077005-25077258 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 12-267
Cow position: chr17:9748589-9748338 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 52

Conread position: 12-267
Cow position: chr17:17222161-17221912 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 46

Conread position: 12-267
Cow position: chr17:23101392-23101647 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 58

Conread position: 12-267
Cow position: chr17:32651435-32651184 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 49

Conread position: 12-284
Cow position: chr17:4155423-4155154 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 193, 36

Conread position: 14-267
Cow position: chr17:27775751-27775488 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 35

Conread position: 17-267
Cow position: chr17:6612887-6612640 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr17:19317778-19317531 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position: chr17:27986022-27986269 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 47

Conread position: 18-267
Cow position: chr17:19377286-19377533 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 48

Conread position: 21-267
Cow position: chr17:4152412-4152656 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 44

Conread position: 26-267
Cow position: chr17:28831086-28830850 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 179, 35

Conread position: 31-267
Cow position: chr17:10446001-10445771 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 186, 30

Conread position: 34-267
Cow position: chr17:399770-399997 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:3744008-3743781 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:4176829-4177056 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:5548706-5548933 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:5638047-5638274 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:5809812-5810039 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:7251836-7251617 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 156, 27

Conread position: 34-267
Cow position: chr17:8993496-8993723 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:10008770-10008997 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:11677392-11677619 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:15894513-15894740 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr17:18563965-18564192 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr17:20231937-20232164 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 182, 27

Conread position: 34-267
Cow position: chr17:20391619-20391392 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:25835262-25835035 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:28155514-28155741 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:31671055-31671282 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:32531008-32531234 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 27

Conread position: 34-267
Cow position: chr17:34565191-34564964 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr17:39844475-39844248 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr17:42026330-42026103 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 181, 27

Conread position: 39-267
Cow position: chr17:25340740-25340967 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 152, 22

Conread position: 44-267
Cow position: chr17:27978943-27978722 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 156, 22

Conread position: 52-266
Cow position: chr17:8926448-8926667 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 134, 30

Conread position: 52-267
Cow position: chr17:35020897-35021117 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 10

Conread position: 73-287
Cow position: chr17:31305676-31305889 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 120

Conread position: 81-265
Cow position: chr17:30410664-30410849 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 22

Conread position: 81-267
Cow position: chr17:3651924-3652109 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr17:4123001-4123185 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 31

Conread position: 81-267
Cow position: chr17:16699674-16699859 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr17:18895137-18894947 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 22

Conread position: 81-267
Cow position: chr17:25141004-25140819 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 19

Conread position: 81-267
Cow position: chr17:25542060-25542239 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 92

Conread position: 81-267
Cow position: chr17:32472078-32472263 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 92

Conread position: 81-269
Cow position: chr17:42349738-42349936 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 107, 75

Conread position: 81-272
Cow position: chr17:9660525-9660716 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 110, 83

Conread position: 82-267
Cow position: chr17:13907552-13907733 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 91

Conread position: 83-267
Cow position: chr17:11786724-11786541 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr17:20987850-20988033 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 122, 90

Conread position: 87-251
Cow position: chr17:42001981-42001810 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 91-272
Cow position: chr17:29274670-29274486 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 116

Conread position: 94-268
Cow position: chr17:28175493-28175315 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 79

Conread position: 101-266
Cow position: chr17:43471796-43471966 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 107

Conread position: 114-267
Cow position: chr17:26592931-26592773 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.