Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 1-267
Cow position: chr22:7302057-7302327 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 65

Conread position: 2-244
Cow position: chr22:31780545-31780786 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 63

Conread position: 2-245
Cow position: chr22:28315216-28314972 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 56

Conread position: 2-263
Cow position: chr22:7895857-7895599 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 60

Conread position: 2-263
Cow position: chr22:42681818-42682080 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 58

Conread position: 2-267
Cow position: chr22:2442874-2442607 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 185, 80

Conread position: 2-267
Cow position: chr22:14097080-14097341 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 47

Conread position: 2-267
Cow position: chr22:25202181-25201918 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 16

Conread position: 2-268
Cow position: chr22:38176693-38176423 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 40

Conread position: 2-270
Cow position: chr22:7288257-7287989 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 62

Conread position: 2-292
Cow position: chr22:33409088-33409381 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 62

Conread position: 2-295
Cow position: chr22:6530066-6529767 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 39

Conread position: 2-300
Cow position: chr22:40395396-40395107 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 170, 16

Conread position: 3-265
Cow position: chr22:34016690-34016953 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 76

Conread position: 3-267
Cow position: chr22:5369066-5368807 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 8

Conread position: 3-267
Cow position: chr22:41353292-41353557 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 65

Conread position: 3-269
Cow position: chr22:28996304-28996565 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 8

Conread position: 4-267
Cow position: chr22:38112724-38112458 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 184, 44

Conread position: 5-251
Cow position: chr22:39703566-39703321 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 54

Conread position: 6-250
Cow position: chr22:39311733-39311986 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 74

Conread position: 7-268
Cow position: chr22:21570850-21570582 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 67

Conread position: 8-252
Cow position: chr22:36555152-36555389 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 8-267
Cow position: chr22:18233863-18233614 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 194, 26

Conread position: 8-267
Cow position: chr22:19592193-19591926 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 56

Conread position: 8-267
Cow position: chr22:42933709-42933971 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 56

Conread position: 10-265
Cow position: chr22:14061425-14061684 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 178, 55

Conread position: 11-267
Cow position: chr22:11128087-11127833 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 57

Conread position: 11-267
Cow position: chr22:13695638-13695892 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 58

Conread position: 11-267
Cow position: chr22:15951670-15951923 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 206, 37

Conread position: 11-267
Cow position: chr22:29855847-29855594 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 53

Conread position: 12-261
Cow position: chr22:891365-891612 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 14

Conread position: 12-265
Cow position: chr22:11489318-11489068 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 25

Conread position: 12-267
Cow position: chr22:5282282-5282031 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 48

Conread position: 12-267
Cow position: chr22:26184386-26184644 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 161, 14

Conread position: 12-267
Cow position: chr22:34441859-34442122 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 182

Conread position: 12-267
Cow position: chr22:44740878-44740628 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 23

Conread position: 13-267
Cow position: chr22:17922601-17922854 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 46

Conread position: 13-267
Cow position: chr22:34894746-34894497 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 183, 35

Conread position: 16-267
Cow position: chr22:10906211-10906459 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 48

Conread position: 17-264
Cow position: chr22:14491140-14490891 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 174, 17

Conread position: 17-267
Cow position: chr22:102916-102669 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr22:6623872-6623625 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 48

Conread position: 17-267
Cow position: chr22:39708219-39707976 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 200, 44

Conread position: 17-267
Cow position: chr22:41241020-41240773 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr22:46565981-46566228 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 42

Conread position: 17-267
Cow position: chr22:46582665-46582912 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 42

Conread position: 21-267
Cow position: chr22:19596977-19597221 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 44

Conread position: 22-251
Cow position: chr22:39633450-39633217 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 42

Conread position: 29-258
Cow position: chr22:16450084-16449850 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 56

Conread position: 34-267
Cow position: chr22:3274385-3274612 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr22:3809040-3808813 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:4537977-4537750 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:4930369-4930596 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:5640253-5640480 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:10596503-10596276 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:11231324-11231551 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr22:12901966-12901739 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:13329245-13329472 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:13553327-13553100 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:14808228-14808001 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 172, 27

Conread position: 34-267
Cow position: chr22:15729864-15729637 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:20569068-20569295 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr22:21330696-21330922 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:22108013-22107789 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 165, 27

Conread position: 34-267
Cow position: chr22:25645780-25646007 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:32944422-32944195 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:33196082-33196309 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:37031656-37031883 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:39255149-39254923 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr22:39903355-39903128 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr22:40828093-40828320 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 36-290
Cow position: chr22:3254050-3254295 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 179, 25

Conread position: 44-268
Cow position: chr22:34886381-34886153 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 27

Conread position: 76-295
Cow position: chr22:12630909-12631133 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 9

Conread position: 80-296
Cow position: chr22:26070337-26070115 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 94

Conread position: 81-266
Cow position: chr22:3987220-3987036 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 93

Conread position: 81-267
Cow position: chr22:6756600-6756785 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr22:9284810-9284995 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr22:9615637-9615450 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 148

Conread position: 81-267
Cow position: chr22:27243666-27243481 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr22:31497395-31497587 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 81-267
Cow position: chr22:34902716-34902528 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 95

Conread position: 81-267
Cow position: chr22:39696019-39695834 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr22:47570078-47569892 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 94

Conread position: 81-269
Cow position: chr22:6755239-6755426 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 124, 92

Conread position: 81-289
Cow position: chr22:23861487-23861696 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 124

Conread position: 81-293
Cow position: chr22:1591962-1591751 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 134, 97

Conread position: 83-267
Cow position: chr22:41927650-41927839 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 83-267
Cow position: chr22:45365828-45365645 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 122, 90

Conread position: 91-267
Cow position: chr22:982459-982284 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 82

Conread position: 91-267
Cow position: chr22:43279560-43279735 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 82

Conread position: 116-264
Cow position: chr22:31513484-31513637 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.