Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 1-267
Cow position: chr26:10461053-10460786 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 65

Conread position: 2-219
Cow position: chr26:7478956-7479180 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 61

Conread position: 2-254
Cow position: chr26:13832173-13832428 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 59

Conread position: 2-261
Cow position: chr26:1977004-1977259 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 189, 39

Conread position: 2-266
Cow position: chr26:19014331-19014065 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 61

Conread position: 2-267
Cow position: chr26:2227136-2226876 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 9

Conread position: 2-267
Cow position: chr26:32083371-32083648 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 46

Conread position: 2-275
Cow position: chr26:20248428-20248154 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 186, 24

Conread position: 3-228
Cow position: chr26:20134179-20133949 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 60

Conread position: 3-267
Cow position: chr26:31781750-31781493 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 26

Conread position: 4-307
Cow position: chr26:11963133-11962830 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 60

Conread position: 6-267
Cow position: chr26:6502248-6501993 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 42

Conread position: 6-267
Cow position: chr26:6714482-6714741 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 58

Conread position: 8-230
Cow position: chr26:6323464-6323242 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 55

Conread position: 8-267
Cow position: chr26:6037641-6037895 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 56

Conread position: 8-267
Cow position: chr26:32850708-32850964 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 18

Conread position: 11-267
Cow position: chr26:21397574-21397827 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 53

Conread position: 12-267
Cow position: chr26:6447813-6448062 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 14

Conread position: 12-290
Cow position: chr26:14359319-14359608 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 94

Conread position: 13-267
Cow position: chr26:24738620-24738365 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 56

Conread position: 13-267
Cow position: chr26:30569087-30569337 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 51

Conread position: 17-266
Cow position: chr26:35360944-35361190 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr26:4486543-4486296 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position: chr26:4594514-4594763 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 55

Conread position: 17-267
Cow position: chr26:8053587-8053340 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr26:24823582-24823334 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 48

Conread position: 17-267
Cow position: chr26:24839083-24839330 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr26:29434265-29434018 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 31

Conread position: 17-267
Cow position: chr26:31063608-31063855 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 21-267
Cow position: chr26:35560033-35560277 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 45

Conread position: 29-267
Cow position: chr26:35304065-35303830 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 36

Conread position: 34-267
Cow position: chr26:762155-762382 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr26:2487516-2487289 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr26:2901955-2902182 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr26:3026048-3026275 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr26:3733960-3734187 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr26:3815443-3815670 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 183, 31

Conread position: 34-267
Cow position: chr26:4066027-4065800 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 182, 31

Conread position: 34-267
Cow position: chr26:8239009-8238782 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr26:9485619-9485392 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr26:11814936-11815162 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr26:14209430-14209203 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr26:16210643-16210416 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr26:19181064-19181291 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr26:22805166-22805392 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr26:26286880-26286651 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 171, 30

Conread position: 34-290
Cow position: chr26:15594638-15594891 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 171, 32

Conread position: 66-267
Cow position: chr26:33879069-33879268 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 139, 16

Conread position: 81-263
Cow position: chr26:22995636-22995820 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 30

Conread position: 81-266
Cow position: chr26:28997227-28997416 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 81-267
Cow position: chr26:3231436-3231251 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 136, 92

Conread position: 81-267
Cow position: chr26:6475698-6475890 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 92

Conread position: 81-267
Cow position: chr26:9116009-9115824 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 92

Conread position: 81-267
Cow position: chr26:13706260-13706445 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr26:26612427-26612242 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-278
Cow position: chr26:26666055-26666257 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 94

Conread position: 81-282
Cow position: chr26:8405144-8404946 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 92

Conread position: 82-266
Cow position: chr26:2387134-2387323 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 83-267
Cow position: chr26:2481255-2481072 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr26:12584275-12584458 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 132, 90

Conread position: 83-267
Cow position: chr26:16865244-16865061 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 90

Conread position: 83-268
Cow position: chr26:13975943-13976127 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 99

Conread position: 91-267
Cow position: chr26:17663825-17663646 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 9

Conread position: 116-268
Cow position: chr26:14455295-14455451 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 55

Show alignments to all cow chromosomes.