Cow genome map
Conread name: | Ss1.1-Pig4-TMW8053J21.3 |
Conread position: | 1-267 |
Cow position: | chr29:40497859-40498122 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 174 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 48, 58 |
Conread position: | 2-266 |
Cow position: | chr29:12876186-12875924 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 185 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 34, 19 |
Conread position: | 2-267 |
Cow position: | chr29:28955478-28955209 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 199 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 38, 19 |
Conread position: | 2-267 |
Cow position: | chr29:30193330-30193596 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 191 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 189, 18 |
Conread position: | 2-267 |
Cow position: | chr29:33553349-33553092 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 186 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 48, 64 |
Conread position: | 3-253 |
Cow position: | chr29:18104268-18104520 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 172 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 190, 46 |
Conread position: | 3-266 |
Cow position: | chr29:13093917-13093651 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 187 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 38, 61 |
Conread position: | 3-267 |
Cow position: | chr29:12577464-12577196 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 184 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 25, 46 |
Conread position: | 5-267 |
Cow position: | chr29:36299708-36299454 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 188 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 183, 19 |
Conread position: | 7-265 |
Cow position: | chr29:28100371-28100115 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 175 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 7, 42 |
Conread position: | 7-267 |
Cow position: | chr29:16035383-16035640 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 172 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 34, 57 |
Conread position: | 7-289 |
Cow position: | chr29:32871018-32870733 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 188 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 182, 34 |
Conread position: | 8-290 |
Cow position: | chr29:14372493-14372781 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 194 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 163, 40 |
Conread position: | 11-265 |
Cow position: | chr29:33549357-33549613 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 177 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 37, 66 |
Conread position: | 11-267 |
Cow position: | chr29:16065720-16065467 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 176 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 28, 57 |
Conread position: | 11-267 |
Cow position: | chr29:16152587-16152335 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 171 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 34, 54 |
Conread position: | 11-267 |
Cow position: | chr29:16184768-16185021 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 175 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 30, 53 |
Conread position: | 12-266 |
Cow position: | chr29:29066203-29065953 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 177 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 24, 52 |
Conread position: | 12-267 |
Cow position: | chr29:19547112-19547363 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 187 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 67, 29 |
Conread position: | 12-267 |
Cow position: | chr29:34745878-34746129 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 170 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 186, 14 |
Conread position: | 12-267 |
Cow position: | chr29:35434647-35434395 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 168 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 46, 36 |
Conread position: | 17-267 |
Cow position: | chr29:6455650-6455403 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 166 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 188, 31 |
Conread position: | 17-267 |
Cow position: | chr29:19924981-19925228 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 172 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 19, 51 |
Conread position: | 17-267 |
Cow position: | chr29:32329255-32329502 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 167 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 31, 48 |
Conread position: | 17-267 |
Cow position: | chr29:32378576-32378329 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 169 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 31, 48 |
Conread position: | 34-267 |
Cow position: | chr29:1911659-1911886 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 34-267 |
Cow position: | chr29:6414266-6414039 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 171, 31 |
Conread position: | 34-267 |
Cow position: | chr29:11118727-11118954 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 34-267 |
Cow position: | chr29:12898543-12898316 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 34-267 |
Cow position: | chr29:13623389-13623616 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 34-267 |
Cow position: | chr29:14611230-14611003 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 161 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 181, 27 |
Conread position: | 34-267 |
Cow position: | chr29:15965569-15965796 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 160 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 181, 27 |
Conread position: | 34-267 |
Cow position: | chr29:16785662-16785435 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 171, 31 |
Conread position: | 34-267 |
Cow position: | chr29:18011556-18011329 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 159 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 171, 31 |
Conread position: | 34-267 |
Cow position: | chr29:18300470-18300243 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 171, 31 |
Conread position: | 34-267 |
Cow position: | chr29:20014303-20014530 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 34-267 |
Cow position: | chr29:20593716-20593489 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 161 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 34-267 |
Cow position: | chr29:30707796-30708023 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 159 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 34-267 |
Cow position: | chr29:32298709-32298482 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 34-267 |
Cow position: | chr29:39048085-39047858 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 171, 31 |
Conread position: | 34-268 |
Cow position: | chr29:21209918-21209690 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 160 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 171, 27 |
Conread position: | 42-267 |
Cow position: | chr29:650012-649788 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 155 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 153, 19 |
Conread position: | 69-251 |
Cow position: | chr29:20923138-20923324 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 137 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 119, 94 |
Conread position: | 78-266 |
Cow position: | chr29:8070481-8070298 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 132 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 81-267 |
Cow position: | chr29:7664054-7664243 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 137 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 109, 55 |
Conread position: | 81-267 |
Cow position: | chr29:34865530-34865345 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 131 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 124, 92 |
Conread position: | 82-267 |
Cow position: | chr29:17154194-17154006 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 136 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 77, 67 |
Conread position: | 82-270 |
Cow position: | chr29:37719621-37719428 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 135 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 83-267 |
Cow position: | chr29:9638604-9638787 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 132 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 122, 100 |
Conread position: | 83-267 |
Cow position: | chr29:28579081-28578898 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 132 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 122, 90 |
Conread position: | 83-267 |
Cow position: | chr29:33599397-33599580 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 130 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 122, 90 |
Conread position: | 87-267 |
Cow position: | chr29:35112367-35112551 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 130 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 113, 0 |
Show alignments to all cow chromosomes.