Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 2-196
Cow position: chr3:60618391-60618198 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 63

Conread position: 2-197
Cow position: chr3:68357607-68357801 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 62

Conread position: 2-249
Cow position: chr3:57403039-57403282 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 61

Conread position: 2-250
Cow position: chr3:55985435-55985190 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 57

Conread position: 2-250
Cow position: chr3:62912176-62912430 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 66

Conread position: 2-251
Cow position: chr3:70353647-70353895 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 192, 45

Conread position: 2-265
Cow position: chr3:14521217-14520954 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 149, 32

Conread position: 2-265
Cow position: chr3:66859544-66859283 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 76

Conread position: 2-266
Cow position: chr3:27579845-27580107 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 24

Conread position: 2-266
Cow position: chr3:62784814-62785074 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 62

Conread position: 2-267
Cow position: chr3:2383948-2384217 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 48

Conread position: 2-267
Cow position: chr3:18082735-18082998 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 189, 31

Conread position: 2-267
Cow position: chr3:19830229-19830490 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 186, 39

Conread position: 2-267
Cow position: chr3:45677646-45677379 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 181, 57

Conread position: 2-267
Cow position: chr3:56914811-56914548 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 62

Conread position: 2-267
Cow position: chr3:68256847-68256583 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 46

Conread position: 2-267
Cow position: chr3:68261327-68261059 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 29

Conread position: 2-267
Cow position: chr3:70415285-70415557 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 64

Conread position: 2-267
Cow position: chr3:74139938-74140206 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 59

Conread position: 2-269
Cow position: chr3:30192521-30192786 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 169, 46

Conread position: 2-270
Cow position: chr3:68379543-68379278 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 80

Conread position: 2-271
Cow position: chr3:41854656-41854927 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 47

Conread position: 2-272
Cow position: chr3:61183395-61183126 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 64

Conread position: 2-274
Cow position: chr3:69496003-69496271 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 213, 46

Conread position: 2-281
Cow position: chr3:40068932-40069199 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 85, 16

Conread position: 2-288
Cow position: chr3:35820660-35820373 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 77

Conread position: 2-296
Cow position: chr3:24909925-24909631 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 61

Conread position: 2-296
Cow position: chr3:52203669-52203369 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 191, 24

Conread position: 3-194
Cow position: chr3:17885449-17885260 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 61

Conread position: 3-267
Cow position: chr3:8496986-8497248 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 190, 45

Conread position: 3-267
Cow position: chr3:75938508-75938767 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 61

Conread position: 3-271
Cow position: chr3:48621078-48620803 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 265

Conread position: 4-198
Cow position: chr3:4344357-4344162 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 59

Conread position: 4-268
Cow position: chr3:53159306-53159032 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 61

Conread position: 5-267
Cow position: chr3:62820654-62820397 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 184, 21

Conread position: 7-267
Cow position: chr3:28675749-28675492 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 57

Conread position: 7-267
Cow position: chr3:60701329-60701593 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 44

Conread position: 7-267
Cow position: chr3:74849279-74849541 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 74, 19

Conread position: 8-266
Cow position: chr3:72604109-72603849 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 59

Conread position: 8-267
Cow position: chr3:16115326-16115069 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 17

Conread position: 8-267
Cow position: chr3:20471601-20471866 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 18

Conread position: 8-267
Cow position: chr3:75037914-75038170 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 54

Conread position: 8-284
Cow position: chr3:8235177-8234895 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 143, 40

Conread position: 9-238
Cow position: chr3:22882286-22882519 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 32, 55

Conread position: 9-272
Cow position: chr3:4691759-4691494 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 61

Conread position: 11-264
Cow position: chr3:17710093-17709846 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 194, 37

Conread position: 11-267
Cow position: chr3:16226793-16226546 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 194, 23

Conread position: 11-267
Cow position: chr3:32619086-32619341 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 54

Conread position: 11-267
Cow position: chr3:36670665-36670921 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 37

Conread position: 11-267
Cow position: chr3:38096825-38096572 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr3:40194795-40194542 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr3:79669035-79668782 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chr3:81064349-81064096 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 12-261
Cow position: chr3:49327699-49327456 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 193, 36

Conread position: 12-266
Cow position: chr3:19711560-19711811 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 203, 36

Conread position: 12-267
Cow position: chr3:17331523-17331271 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 36

Conread position: 12-267
Cow position: chr3:23169315-23169567 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 197, 36

Conread position: 12-267
Cow position: chr3:26219307-26219557 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 6

Conread position: 12-267
Cow position: chr3:49218553-49218805 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 14

Conread position: 12-267
Cow position: chr3:56125502-56125235 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 81

Conread position: 12-267
Cow position: chr3:79902258-79902006 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 36

Conread position: 12-270
Cow position: chr3:73639480-73639231 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 67

Conread position: 13-266
Cow position: chr3:14280598-14280348 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 55

Conread position: 13-267
Cow position: chr3:2036052-2035802 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 186, 35

Conread position: 14-267
Cow position: chr3:68156230-68155983 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 12

Conread position: 14-270
Cow position: chr3:32166394-32166130 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 55

Conread position: 15-299
Cow position: chr3:24308906-24308619 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 50

Conread position: 16-267
Cow position: chr3:24442187-24442435 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 48

Conread position: 17-267
Cow position: chr3:3595992-3596239 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr3:3618719-3618472 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr3:47077694-47077941 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position: chr3:51857769-51857522 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr3:51869978-51869731 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 200, 31

Conread position: 17-267
Cow position: chr3:55837760-55837513 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 47

Conread position: 17-267
Cow position: chr3:56484336-56484583 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 18-263
Cow position: chr3:23735353-23735595 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 30

Conread position: 18-267
Cow position: chr3:8240676-8240431 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 197, 40

Conread position: 18-267
Cow position: chr3:40205284-40205531 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 31

Conread position: 18-267
Cow position: chr3:78472073-78472319 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 47

Conread position: 22-252
Cow position: chr3:69510631-69510863 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 37

Conread position: 27-261
Cow position: chr3:24572162-24572394 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 37

Conread position: 31-267
Cow position: chr3:29573180-29573410 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 159, 30

Conread position: 31-267
Cow position: chr3:51338275-51338505 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 186, 34

Conread position: 31-267
Cow position: chr3:54877542-54877312 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 174, 39

Conread position: 34-250
Cow position: chr3:19234672-19234462 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:1760389-1760162 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:2573426-2573199 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:6754583-6754356 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:7767812-7767585 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 168, 27

Conread position: 34-267
Cow position: chr3:8331175-8330947 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 27

Conread position: 34-267
Cow position: chr3:11418445-11418218 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:12932665-12932438 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:13361345-13361118 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 175, 27

Conread position: 34-267
Cow position: chr3:14144682-14144909 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:14680980-14680753 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:14725027-14724801 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 175, 27

Conread position: 34-267
Cow position: chr3:15233264-15233491 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:18863336-18863109 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 182, 27

Conread position: 34-267
Cow position: chr3:19691596-19691823 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position: chr3:19881948-19881721 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:20388572-20388799 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:20476397-20476170 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:20796191-20795964 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:20843671-20843898 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:24343965-24344192 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:24557677-24557904 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:26892389-26892162 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:27687464-27687691 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:28933802-28933575 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:29461286-29461513 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:30301888-30301661 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:32356649-32356422 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:32411668-32411895 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr3:35044058-35043831 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:35805711-35805484 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr3:39232610-39232383 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr3:42277355-42277582 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:42976417-42976643 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 181, 31

Conread position: 34-267
Cow position: chr3:45749153-45748926 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 182, 27

Conread position: 34-267
Cow position: chr3:45946627-45946854 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 183, 32

Conread position: 34-267
Cow position: chr3:47720145-47719918 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:49610317-49610544 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:49930347-49930574 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 182, 27

Conread position: 34-267
Cow position: chr3:50217887-50217660 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 182, 31

Conread position: 34-267
Cow position: chr3:51256837-51256610 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr3:51520168-51520395 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr3:52045121-52045348 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr3:52149386-52149613 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr3:55085454-55085686 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 51

Conread position: 34-267
Cow position: chr3:58912936-58912709 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr3:61200688-61200461 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr3:69273794-69273567 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 175, 27

Conread position: 34-267
Cow position: chr3:75771236-75771463 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr3:76865330-76865103 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr3:80741769-80741542 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-268
Cow position: chr3:580078-579850 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-296
Cow position: chr3:43633953-43634207 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 52-263
Cow position: chr3:74233928-74233718 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 121

Conread position: 65-267
Cow position: chr3:76976478-76976270 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 81-261
Cow position: chr3:22716615-22716794 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 95

Conread position: 81-264
Cow position: chr3:56154129-56153945 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 107, 45

Conread position: 81-264
Cow position: chr3:61283191-61283004 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 104, 19

Conread position: 81-265
Cow position: chr3:3845148-3845337 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 90, 22

Conread position: 81-265
Cow position: chr3:9590700-9590882 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 134, 80

Conread position: 81-266
Cow position: chr3:64536854-64537045 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 81-267
Cow position: chr3:2525132-2524947 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr3:8901104-8900915 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 120, 109

Conread position: 81-267
Cow position: chr3:17937163-17937346 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr3:21594138-21593953 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 93

Conread position: 81-267
Cow position: chr3:45098096-45097911 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr3:50205429-50205244 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr3:55110155-55110340 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 102

Conread position: 81-267
Cow position: chr3:62883665-62883476 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 92

Conread position: 81-267
Cow position: chr3:66118515-66118700 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr3:73936337-73936530 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 81-267
Cow position: chr3:74084224-74084034 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 96

Conread position: 81-267
Cow position: chr3:74699956-74700147 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 81-308
Cow position: chr3:1034944-1034719 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 92

Conread position: 82-267
Cow position: chr3:49160531-49160712 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 83-267
Cow position: chr3:13326478-13326661 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr3:14456217-14456399 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 122, 80

Conread position: 83-267
Cow position: chr3:19959449-19959266 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr3:53879411-53879594 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr3:58934229-58934041 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 92

Conread position: 83-267
Cow position: chr3:68888718-68888901 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 90

Conread position: 83-269
Cow position: chr3:36122029-36121844 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 132, 90

Conread position: 83-270
Cow position: chr3:36145716-36145907 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 108, 74

Conread position: 83-270
Cow position: chr3:53046955-53047144 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 122, 90

Conread position: 85-265
Cow position: chr3:27673181-27673369 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 86-270
Cow position: chr3:43045746-43045562 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 93

Conread position: 90-267
Cow position: chr3:43426449-43426269 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 69

Conread position: 91-268
Cow position: chr3:72615138-72614955 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 80, 84

Conread position: 93-288
Cow position: chr3:1483866-1483673 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 98, 53

Conread position: 100-292
Cow position: chr3:32344127-32344313 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 18

Show alignments to all cow chromosomes.