Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053J21.3 | 
| Conread position: | 2-213 | 
| Cow position: | chr4:27167103-27166894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 183, 47 | 
| Conread position: | 2-261 | 
| Cow position: | chr4:49667787-49668051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 39, 24 | 
| Conread position: | 2-265 | 
| Cow position: | chr4:29132977-29132709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 37, 71 | 
| Conread position: | 2-266 | 
| Cow position: | chr4:8120383-8120645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 198, 46 | 
| Conread position: | 2-266 | 
| Cow position: | chr4:42907518-42907244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 54, 44 | 
| Conread position: | 2-267 | 
| Cow position: | chr4:993302-993561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 36, 61 | 
| Conread position: | 2-267 | 
| Cow position: | chr4:49409246-49408985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 214, 46 | 
| Conread position: | 2-267 | 
| Cow position: | chr4:49852052-49852322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 40, 63 | 
| Conread position: | 2-267 | 
| Cow position: | chr4:53128468-53128731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 189, 50 | 
| Conread position: | 2-299 | 
| Cow position: | chr4:22089600-22089307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 36, 64 | 
| Conread position: | 3-236 | 
| Cow position: | chr4:49929662-49929893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 185, 38 | 
| Conread position: | 7-265 | 
| Cow position: | chr4:24087458-24087200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 163, 41 | 
| Conread position: | 7-266 | 
| Cow position: | chr4:52085872-52085619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 34, 63 | 
| Conread position: | 7-285 | 
| Cow position: | chr4:7559741-7560020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 34, 61 | 
| Conread position: | 8-267 | 
| Cow position: | chr4:28613596-28613340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 194, 40 | 
| Conread position: | 8-267 | 
| Cow position: | chr4:37553269-37553525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 33, 56 | 
| Conread position: | 8-267 | 
| Cow position: | chr4:56177592-56177328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 31, 19 | 
| Conread position: | 8-267 | 
| Cow position: | chr4:59118371-59118637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 54, 36 | 
| Conread position: | 11-250 | 
| Cow position: | chr4:27546531-27546296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 30, 53 | 
| Conread position: | 11-252 | 
| Cow position: | chr4:7258655-7258892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 28, 53 | 
| Conread position: | 11-263 | 
| Cow position: | chr4:37707425-37707674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 29, 53 | 
| Conread position: | 11-267 | 
| Cow position: | chr4:33019914-33020167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 29, 53 | 
| Conread position: | 11-267 | 
| Cow position: | chr4:44493812-44494065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 48, 37 | 
| Conread position: | 11-284 | 
| Cow position: | chr4:29035687-29035419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 205, 37 | 
| Conread position: | 12-251 | 
| Cow position: | chr4:3687699-3687464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 27, 60 | 
| Conread position: | 12-267 | 
| Cow position: | chr4:20139749-20140007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 27, 14 | 
| Conread position: | 12-267 | 
| Cow position: | chr4:23655765-23655514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 29, 51 | 
| Conread position: | 12-267 | 
| Cow position: | chr4:47047515-47047260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 26, 73 | 
| Conread position: | 12-268 | 
| Cow position: | chr4:51898774-51898521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 18, 69 | 
| Conread position: | 14-267 | 
| Cow position: | chr4:38974083-38973832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 5, 35 | 
| Conread position: | 17-267 | 
| Cow position: | chr4:9375369-9375616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 188, 31 | 
| Conread position: | 17-267 | 
| Cow position: | chr4:10123130-10122883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 17, 47 | 
| Conread position: | 17-267 | 
| Cow position: | chr4:31483990-31484237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 188, 31 | 
| Conread position: | 17-267 | 
| Cow position: | chr4:33146582-33146334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 138, 31 | 
| Conread position: | 17-267 | 
| Cow position: | chr4:36350577-36350330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 41, 31 | 
| Conread position: | 17-267 | 
| Cow position: | chr4:58576943-58577190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 188, 31 | 
| Conread position: | 17-267 | 
| Cow position: | chr4:62120732-62120484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 22, 47 | 
| Conread position: | 18-263 | 
| Cow position: | chr4:4672570-4672809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 29, 42 | 
| Conread position: | 18-279 | 
| Cow position: | chr4:17067379-17067634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 132, 21 | 
| Conread position: | 21-267 | 
| Cow position: | chr4:607326-607082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 9, 44 | 
| Conread position: | 31-267 | 
| Cow position: | chr4:40410606-40410834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 184, 30 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:652731-652504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:6395792-6395565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 171, 31 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:7138662-7138889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 171, 31 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:7260107-7260334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 171, 31 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:13375321-13375094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 182, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:14048128-14047901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:14386571-14386798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:14967783-14967556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:16765802-16766029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 182, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:17752513-17752286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:20025340-20025113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:21044460-21044687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:26538368-26538141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:28456329-28456556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:31774615-31774842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 171, 31 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:37584164-37584391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:38834410-38834637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 171, 31 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:41429528-41429755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 171, 31 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:42381608-42381835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 171, 31 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:42865711-42865484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:44662977-44663206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 133, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:46021294-46021067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:47264481-47264254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:48411206-48411433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:48736582-48736355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 183, 31 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:56191461-56191688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:57493583-57493810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-267 | 
| Cow position: | chr4:60579426-60579653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 171, 27 | 
| Conread position: | 34-308 | 
| Cow position: | chr4:27337914-27337647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 183, 27 | 
| Conread position: | 44-266 | 
| Cow position: | chr4:11389836-11390064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 35, 131 | 
| Conread position: | 44-267 | 
| Cow position: | chr4:36755463-36755236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 147, 35 | 
| Conread position: | 65-267 | 
| Cow position: | chr4:39080292-39080504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 14, 148 | 
| Conread position: | 67-265 | 
| Cow position: | chr4:29826522-29826725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 12, 166 | 
| Conread position: | 81-263 | 
| Cow position: | chr4:25972603-25972416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 81-263 | 
| Cow position: | chr4:34577284-34577097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 81-265 | 
| Cow position: | chr4:22861213-22861401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 100, 178 | 
| Conread position: | 81-265 | 
| Cow position: | chr4:49741186-49741000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 121, 11 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:120028-120213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 124, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:2609946-2609758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 92, 55 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:12752482-12752298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 124, 71 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:14470864-14471049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 118, 84 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:15056465-15056280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 127, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:18684415-18684600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 124, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:19025709-19025895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 18, 93 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:19256028-19255841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 133, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:20328008-20328194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 73, 102 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:21588903-21589087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 124, 71 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:26984921-26984738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:28182450-28182259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 132, 124 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:31174966-31174774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:31535477-31535292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 124, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:32658172-32658357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 124, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:38799488-38799683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 50, 93 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:46708823-46709008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 134, 84 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:47730575-47730391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 134, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:49176148-49175963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 136, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:61624922-61625112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:61897828-61898013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 107, 92 | 
| Conread position: | 81-267 | 
| Cow position: | chr4:63002110-63001925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 124, 92 | 
| Conread position: | 81-268 | 
| Cow position: | chr4:34223596-34223410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 134, 92 | 
| Conread position: | 81-268 | 
| Cow position: | chr4:53055359-53055551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 81-269 | 
| Cow position: | chr4:36818191-36818384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 81-270 | 
| Cow position: | chr4:57206272-57206077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 82-267 | 
| Cow position: | chr4:26009149-26008965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 117, 101 | 
| Conread position: | 82-289 | 
| Cow position: | chr4:5575826-5575614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 106, 96 | 
| Conread position: | 82-294 | 
| Cow position: | chr4:11376834-11376628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 112, 20 | 
| Conread position: | 83-265 | 
| Cow position: | chr4:67408195-67408014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 112, 90 | 
| Conread position: | 83-267 | 
| Cow position: | chr4:17774889-17775072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 132, 90 | 
| Conread position: | 87-286 | 
| Cow position: | chr4:65206760-65206964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 101, 83 | 
| Conread position: | 102-264 | 
| Cow position: | chr4:39262129-39262294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 89, 70 | 
Show alignments to all cow chromosomes.
