Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053J21.3
        

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               2-265
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               112, 48
               

               Conread position:
               2-273
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               2-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               189, 46
               

               Conread position:
               3-266
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               4-259
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               4-267
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               36, 78
               

               Conread position:
               8-265
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               8-267
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               8-268
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 61
               

               Conread position:
               10-267
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 248
               

               Conread position:
               11-267
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               11-267
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               11-267
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               190, 37
               

               Conread position:
               11-267
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               11-267
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               12-237
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               12-259
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               12-267
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               12-267
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               12-267
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               12-267
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               185, 36
               

               Conread position:
               12-267
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               176, 36
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               17-266
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               188, 31
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               188, 31
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               24, 47
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               199, 31
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               24, 47
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               188, 31
               

               Conread position:
               18-267
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               187, 31
               

               Conread position:
               18-267
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               31-267
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               33-267
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               172, 28
               

               Conread position:
               33-267
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               159, 28
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               182, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               181, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               182, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               181, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               181, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               34-267
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               183, 27
               

               Conread position:
               34-285
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               54-267
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 114
               

               Conread position:
               80-267
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               125, 90
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               136, 92
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 97
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               124, 92
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 39
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               134, 119
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               134, 92
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               124, 92
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               124, 92
               

               Conread position:
               81-267
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               124, 92
               

               Conread position:
               81-270
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               107, 172
               

               Conread position:
               82-267
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               83-263
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 55
               

               Conread position:
               83-267
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               132, 90
               

               Conread position:
               83-267
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               122, 91
               

               Conread position:
               83-267
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               133, 90
               

               Conread position:
               83-267
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               134, 90
               

               Conread position:
               83-267
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               88, 92
               

               Conread position:
               87-266
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               112, 160
               

               Conread position:
               87-267
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               90-267
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 118
               

               Conread position:
               94-267
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               100-270
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               91, 109
               
Show alignments to all cow chromosomes.