Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 1-258
Cow position: chr9:55363970-55364227 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 58

Conread position: 1-267
Cow position: chr9:3439395-3439133 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 187, 55

Conread position: 2-219
Cow position: chr9:43731392-43731176 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 66

Conread position: 2-251
Cow position: chr9:42537044-42536795 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 14

Conread position: 2-263
Cow position: chr9:43319885-43320148 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 66

Conread position: 2-266
Cow position: chr9:13115582-13115845 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 39

Conread position: 2-267
Cow position: chr9:12388992-12389251 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 73

Conread position: 2-267
Cow position: chr9:19508714-19508984 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 64

Conread position: 2-267
Cow position: chr9:27368803-27369071 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 46

Conread position: 2-270
Cow position: chr9:5880443-5880172 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 186, 46

Conread position: 2-271
Cow position: chr9:35747532-35747806 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 62

Conread position: 3-264
Cow position: chr9:55634798-55635064 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 60

Conread position: 3-270
Cow position: chr9:19894882-19895145 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 38

Conread position: 5-263
Cow position: chr9:26099581-26099847 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 157

Conread position: 5-267
Cow position: chr9:41932314-41932577 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 180, 43

Conread position: 8-267
Cow position: chr9:4858781-4859053 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 57

Conread position: 8-267
Cow position: chr9:35129070-35129327 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 64

Conread position: 9-267
Cow position: chr9:15501692-15501954 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 56

Conread position: 9-267
Cow position: chr9:49492725-49492983 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 32

Conread position: 10-267
Cow position: chr9:1100483-1100229 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 54

Conread position: 11-267
Cow position: chr9:8908677-8908928 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 68

Conread position: 11-267
Cow position: chr9:20816091-20816344 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 188, 37

Conread position: 11-267
Cow position: chr9:30187602-30187350 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 204, 37

Conread position: 11-267
Cow position: chr9:37109004-37108751 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 54

Conread position: 11-267
Cow position: chr9:55534362-55534106 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 58

Conread position: 12-249
Cow position: chr9:41728784-41729016 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 182, 36

Conread position: 12-267
Cow position: chr9:3807486-3807237 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 151, 36

Conread position: 12-267
Cow position: chr9:16218392-16218145 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 193, 36

Conread position: 12-267
Cow position: chr9:21963358-21963106 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 52

Conread position: 12-267
Cow position: chr9:29184882-29184635 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 14

Conread position: 12-267
Cow position: chr9:44500589-44500341 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 193, 49

Conread position: 12-267
Cow position: chr9:53608143-53607891 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 52

Conread position: 13-266
Cow position: chr9:5864476-5864228 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 158, 13

Conread position: 13-267
Cow position: chr9:9558220-9558482 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 162

Conread position: 13-267
Cow position: chr9:26115598-26115349 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 46

Conread position: 13-271
Cow position: chr9:30162449-30162703 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 64

Conread position: 14-261
Cow position: chr9:20942358-20942116 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 191, 12

Conread position: 17-250
Cow position: chr9:18710268-18710498 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr9:173883-174130 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 47

Conread position: 17-267
Cow position: chr9:1053506-1053753 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 199, 31

Conread position: 17-267
Cow position: chr9:6694017-6693769 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr9:15670743-15670496 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position: chr9:18478004-18478251 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr9:25037506-25037754 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 188, 31

Conread position: 17-267
Cow position: chr9:46874923-46875170 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 51

Conread position: 17-267
Cow position: chr9:53565168-53564921 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 31

Conread position: 17-267
Cow position: chr9:56530520-56530767 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 51

Conread position: 18-267
Cow position: chr9:27781021-27781267 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 197, 30

Conread position: 18-267
Cow position: chr9:37017141-37017387 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 45

Conread position: 22-267
Cow position: chr9:27892373-27892124 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 27

Conread position: 25-267
Cow position: chr9:22583732-22583492 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 163, 44

Conread position: 34-267
Cow position: chr9:1982055-1981828 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position: chr9:2715214-2715441 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position: chr9:6707038-6707266 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:10803541-10803317 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:10919274-10919047 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr9:12275229-12275456 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:13620125-13620352 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:19222765-19222539 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:19303413-19303186 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:19593185-19592958 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:20092515-20092288 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:25645208-25645435 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:26431298-26431525 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chr9:26518558-26518331 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position: chr9:26718948-26718721 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:27993986-27994213 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:28244629-28244856 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:28292806-28293033 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:31361301-31361528 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:32236535-32236762 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chr9:35564667-35564894 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:36025233-36025460 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:37251884-37251657 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:37254276-37254049 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:43225037-43225264 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:56529682-56529909 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:62817348-62817576 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chr9:63564361-63564134 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-269
Cow position: chr9:29534691-29534461 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 171, 31

Conread position: 36-267
Cow position: chr9:2857713-2857488 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 169, 29

Conread position: 36-267
Cow position: chr9:37173535-37173760 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 169, 29

Conread position: 81-267
Cow position: chr9:5030102-5030294 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 92

Conread position: 81-267
Cow position: chr9:5692223-5692037 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 125

Conread position: 81-267
Cow position: chr9:11215684-11215500 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 22

Conread position: 81-267
Cow position: chr9:13972012-13971818 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 81-267
Cow position: chr9:25239698-25239882 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr9:28747207-28747023 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chr9:29625474-29625290 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr9:32582587-32582397 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 129

Conread position: 81-267
Cow position: chr9:33067535-33067720 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 124, 102

Conread position: 81-267
Cow position: chr9:39971351-39971536 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 135, 84

Conread position: 81-267
Cow position: chr9:42696798-42696613 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr9:56531173-56531358 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chr9:58614865-58615050 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 134, 114

Conread position: 82-267
Cow position: chr9:41957985-41958175 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 30

Conread position: 83-267
Cow position: chr9:4192145-4191962 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 134, 90

Conread position: 83-267
Cow position: chr9:14003804-14003621 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr9:15241662-15241479 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 122, 90

Conread position: 83-267
Cow position: chr9:28682028-28681845 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 90

Conread position: 84-263
Cow position: chr9:20637603-20637787 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 91-267
Cow position: chr9:9650026-9649845 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 80, 85

Conread position: 91-267
Cow position: chr9:31406130-31406311 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 92-266
Cow position: chr9:11205508-11205334 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 28

Show alignments to all cow chromosomes.