Cow genome map

Conread name: Ss1.1-Pig4-TMW8053J21.3

Conread position: 1-267
Cow position: chrX:42728768-42728499 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 72

Conread position: 2-231
Cow position: chrX:17282174-17282406 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 45

Conread position: 2-248
Cow position: chrX:42225862-42226109 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 188, 46

Conread position: 2-251
Cow position: chrX:1655295-1655053 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 70

Conread position: 2-264
Cow position: chrX:19320403-19320141 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 63

Conread position: 2-265
Cow position: chrX:33172143-33172414 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 71

Conread position: 2-266
Cow position: chrX:41305818-41306080 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 189, 32

Conread position: 2-267
Cow position: chrX:508339-508607 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 39, 62

Conread position: 2-267
Cow position: chrX:1518624-1518893 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 62

Conread position: 2-267
Cow position: chrX:4664802-4665068 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 66

Conread position: 2-267
Cow position: chrX:11904510-11904769 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 26

Conread position: 2-267
Cow position: chrX:16354533-16354797 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 186, 74

Conread position: 2-267
Cow position: chrX:19447530-19447800 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 80

Conread position: 2-267
Cow position: chrX:19741686-19741959 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 61

Conread position: 2-267
Cow position: chrX:27240553-27240285 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 57

Conread position: 2-267
Cow position: chrX:33004071-33003804 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 62

Conread position: 2-267
Cow position: chrX:42084822-42084555 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 76

Conread position: 2-270
Cow position: chrX:20970738-20970469 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 186, 15

Conread position: 2-271
Cow position: chrX:29010548-29010280 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 62

Conread position: 3-266
Cow position: chrX:1134615-1134350 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 59

Conread position: 3-269
Cow position: chrX:389319-389058 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 26

Conread position: 3-297
Cow position: chrX:39288354-39288650 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 61

Conread position: 4-267
Cow position: chrX:11377386-11377122 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 76

Conread position: 4-286
Cow position: chrX:25151008-25150721 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 5-267
Cow position: chrX:15329464-15329206 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 21

Conread position: 5-267
Cow position: chrX:24169503-24169767 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 61

Conread position: 5-285
Cow position: chrX:42540415-42540133 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 183, 53

Conread position: 6-266
Cow position: chrX:24006016-24006273 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 182, 28

Conread position: 7-267
Cow position: chrX:26845327-26845058 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 62

Conread position: 7-267
Cow position: chrX:34532338-34532084 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 28

Conread position: 8-251
Cow position: chrX:44019508-44019265 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 10

Conread position: 8-265
Cow position: chrX:20801588-20801327 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 51

Conread position: 8-265
Cow position: chrX:27486217-27485958 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 42

Conread position: 8-266
Cow position: chrX:41049924-41049661 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 71

Conread position: 8-267
Cow position: chrX:5566011-5566271 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 180, 26

Conread position: 8-267
Cow position: chrX:7806188-7805929 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 53

Conread position: 8-267
Cow position: chrX:10440030-10440289 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 23

Conread position: 8-267
Cow position: chrX:10866059-10866314 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 18

Conread position: 8-267
Cow position: chrX:12249615-12249354 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 78

Conread position: 8-267
Cow position: chrX:35288469-35288207 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 65

Conread position: 9-268
Cow position: chrX:16229167-16229425 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 39

Conread position: 10-265
Cow position: chrX:15988028-15988280 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 53

Conread position: 10-267
Cow position: chrX:16735331-16735077 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 58

Conread position: 11-267
Cow position: chrX:12360695-12360441 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 53

Conread position: 11-267
Cow position: chrX:22449725-22449467 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 75

Conread position: 11-267
Cow position: chrX:24787915-24788157 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 194, 15

Conread position: 11-267
Cow position: chrX:29903548-29903295 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 48

Conread position: 11-267
Cow position: chrX:30143479-30143731 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 53

Conread position: 11-267
Cow position: chrX:37403216-37403470 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 58

Conread position: 11-274
Cow position: chrX:626239-626497 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 48

Conread position: 12-263
Cow position: chrX:17497901-17497653 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 193, 36

Conread position: 12-267
Cow position: chrX:10256339-10256589 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 203, 36

Conread position: 12-267
Cow position: chrX:11082809-11083057 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 14

Conread position: 12-267
Cow position: chrX:15007346-15007598 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 36

Conread position: 12-267
Cow position: chrX:38094721-38094972 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 14

Conread position: 12-267
Cow position: chrX:40269281-40269029 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 27, 52

Conread position: 12-267
Cow position: chrX:42470132-42470384 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 203, 36

Conread position: 12-268
Cow position: chrX:38071966-38072215 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 193, 29

Conread position: 12-270
Cow position: chrX:42841245-42841509 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 34

Conread position: 13-263
Cow position: chrX:34754388-34754635 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 192, 35

Conread position: 13-267
Cow position: chrX:27106062-27105811 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 192, 35

Conread position: 17-267
Cow position: chrX:6454495-6454249 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 47

Conread position: 17-267
Cow position: chrX:6566874-6566627 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position: chrX:7118844-7119091 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 31

Conread position: 17-267
Cow position: chrX:15620732-15620979 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 47

Conread position: 17-267
Cow position: chrX:16222425-16222179 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 47

Conread position: 17-267
Cow position: chrX:30752574-30752327 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 31

Conread position: 17-267
Cow position: chrX:32331427-32331184 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 199, 17

Conread position: 17-267
Cow position: chrX:38014894-38014647 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 51

Conread position: 17-267
Cow position: chrX:47318206-47317959 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 48

Conread position: 17-267
Cow position: chrX:48423735-48423488 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 47

Conread position: 22-267
Cow position: chrX:21025246-21025487 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 166, 67

Conread position: 27-274
Cow position: chrX:26878457-26878208 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 28

Conread position: 33-267
Cow position: chrX:38230486-38230714 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 172, 32

Conread position: 34-264
Cow position: chrX:2465503-2465729 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 157, 27

Conread position: 34-267
Cow position: chrX:1781685-1781458 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:2664789-2664562 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:2715402-2715175 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:3387886-3387659 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:5334040-5334266 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:5646324-5646551 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 175, 27

Conread position: 34-267
Cow position: chrX:5893008-5892781 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:9018523-9018750 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:10922791-10923018 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:11358285-11358512 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:11672561-11672334 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:11715682-11715909 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 168, 27

Conread position: 34-267
Cow position: chrX:12001367-12001594 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:15346189-15346416 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 26

Conread position: 34-267
Cow position: chrX:15781361-15781134 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:17995239-17995012 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:18223193-18222966 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 175, 31

Conread position: 34-267
Cow position: chrX:18451299-18451526 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:18656025-18656252 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 181, 27

Conread position: 34-267
Cow position: chrX:19473381-19473607 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 183, 31

Conread position: 34-267
Cow position: chrX:19774700-19774927 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:20099102-20098875 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:22608812-22609039 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:22613166-22612939 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position: chrX:27404166-27404392 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:27627135-27626908 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:28314205-28313978 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 182, 27

Conread position: 34-267
Cow position: chrX:29841389-29841616 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 183, 27

Conread position: 34-267
Cow position: chrX:30052689-30052916 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:30197077-30196850 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:30822364-30822137 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:30940961-30940734 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:30965881-30965654 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:32039063-32039289 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:34413556-34413329 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:36730164-36729937 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:37061011-37061238 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:37958277-37958050 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 27

Conread position: 34-267
Cow position: chrX:38331162-38330935 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 183, 31

Conread position: 34-267
Cow position: chrX:40591466-40591239 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 179, 27

Conread position: 34-267
Cow position: chrX:42121083-42120856 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 171, 31

Conread position: 34-267
Cow position: chrX:42459960-42459725 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 142

Conread position: 34-272
Cow position: chrX:13460126-13460361 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 157, 31

Conread position: 34-281
Cow position: chrX:7444864-7444623 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 171, 27

Conread position: 39-266
Cow position: chrX:39757808-39757587 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 166, 22

Conread position: 44-267
Cow position: chrX:7513262-7513044 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 161, 14

Conread position: 44-267
Cow position: chrX:13058338-13058112 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 137, 38

Conread position: 52-265
Cow position: chrX:33493497-33493287 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 153, 6

Conread position: 81-262
Cow position: chrX:10437912-10438093 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 85

Conread position: 81-265
Cow position: chrX:13648046-13648229 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 92

Conread position: 81-267
Cow position: chrX:2151194-2151379 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chrX:9651307-9651493 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 122

Conread position: 81-267
Cow position: chrX:12980609-12980794 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 135, 84

Conread position: 81-267
Cow position: chrX:17631092-17631280 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 81-267
Cow position: chrX:18487976-18488161 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chrX:21191616-21191426 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 110, 172

Conread position: 81-267
Cow position: chrX:23666921-23666736 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 136, 122

Conread position: 81-267
Cow position: chrX:24969078-24969263 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 135, 92

Conread position: 81-267
Cow position: chrX:27422543-27422728 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chrX:29602309-29602487 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 81-267
Cow position: chrX:30825386-30825201 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chrX:31745759-31745944 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chrX:33589877-33589687 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 81-267
Cow position: chrX:37905757-37905558 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 81-267
Cow position: chrX:38852897-38852712 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 92

Conread position: 81-267
Cow position: chrX:39559914-39560099 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 124, 92

Conread position: 81-267
Cow position: chrX:39952599-39952789 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 78

Conread position: 81-267
Cow position: chrX:41488427-41488612 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 92

Conread position: 81-271
Cow position: chrX:21501361-21501167 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 143

Conread position: 81-271
Cow position: chrX:37949530-37949335 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 107, 192

Conread position: 81-276
Cow position: chrX:19023164-19022972 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 136, 31

Conread position: 81-285
Cow position: chrX:38705306-38705095 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 97, 22

Conread position: 82-263
Cow position: chrX:9953857-9953672 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 83

Conread position: 82-267
Cow position: chrX:529541-529351 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 95

Conread position: 82-267
Cow position: chrX:8517345-8517157 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 156

Conread position: 82-267
Cow position: chrX:12724506-12724320 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 121

Conread position: 82-267
Cow position: chrX:18799544-18799732 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 159

Conread position: 82-267
Cow position: chrX:20382794-20382984 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 89, 94

Conread position: 83-265
Cow position: chrX:24827075-24826888 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 126

Conread position: 83-265
Cow position: chrX:35633017-35633199 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 136

Conread position: 83-267
Cow position: chrX:3361555-3361374 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 90

Conread position: 84-267
Cow position: chrX:30093629-30093811 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 131, 89

Conread position: 86-294
Cow position: chrX:19623049-19622834 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 87-269
Cow position: chrX:17265314-17265501 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 87-271
Cow position: chrX:40322648-40322463 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 15

Conread position: 87-274
Cow position: chrX:17609722-17609912 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 152

Conread position: 88-267
Cow position: chrX:37831736-37831920 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 152

Conread position: 90-267
Cow position: chrX:13177728-13177907 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.