Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053K24.3.5
        

               Conread position:
               1-295
               

               Cow position:
               chr11:74554474-74554180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-334
               

               Cow position:
               chr11:74554556-74554225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               95, 84
               

               Conread position:
               3-334
               

               Cow position:
               chr11:74554976-74554645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 88
               

               Conread position:
               3-406
               

               Cow position:
               chr11:74554724-74554318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 87
               

               Conread position:
               4-406
               

               Cow position:
               chr11:74555059-74554654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 0
               

               Conread position:
               4-407
               

               Cow position:
               chr11:74554807-74554401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 86
               

               Conread position:
               9-407
               

               Cow position:
               chr11:74554886-74554485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               260
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               351, 0
               

               Conread position:
               15-406
               

               Cow position:
               chr11:74554628-74554234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 75
               

               Conread position:
               44-406
               

               Cow position:
               chr11:74555103-74554738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               331, 0
               
Show alignments to all cow chromosomes.