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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8053K24.3.5
        

               
Conread position:
               
1-276
               

               
Cow position:
               
chr18:55075134-55075410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr18:53509872-53510154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 110
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:42792607-42792913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr18:50083413-50083779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:50246460-50246838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 8
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr18:53498523-53498932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 15
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:41198125-41198534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 0
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:43175142-43174734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:51812754-51812345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
273, 267
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:52447490-52447899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 343
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:53498016-53498430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 6
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:53559805-53560213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 10
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:53586701-53586292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 367
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:55018011-55018419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:56434427-56434835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
165, 174
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr18:50295235-50295643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr18:56493803-56494215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 201
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr18:50058820-50058412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
188, 12
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:42792102-42792514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 91
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:50271592-50272003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
374, 8
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:50848886-50849297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:51789595-51789183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
374, 0
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:56493890-56494302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 0
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr18:40075237-40075664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 406
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr18:52447742-52448183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 335
               

               
Conread position:
               
1-730
               

               
Cow position:
               
chr18:56494142-56494855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
601
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
514, 425
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr18:55066559-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:50281638-50281960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr18:56316348-56316719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
175, 179
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr18:50848803-50849177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr18:51368387-51367984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr18:41949133-41948726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr18:50049091-50048684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
163, 7
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr18:53586868-53586461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 342
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr18:50098939-50099346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
331, 11
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr18:40075154-40075565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 0
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr18:50059659-50059242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
351, 14
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr18:50030937-50030510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr18:50059155-50058732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
179, 7
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr18:14453072-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr18:40075491-40075701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr18:56247353-56247108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr18:55009111-55009389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
252, 218
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr18:51400916-51401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr18:51789005-51788705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr18:54993792-54994105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr18:42792524-42792852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr18:54992952-54993280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr18:41948628-41948300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 81
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr18:50849139-50849469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr18:52427933-52428263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
166, 174
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr18:52433114-52433444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr18:55018432-55018763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
169, 158
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr18:33092806-33092474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
93, 79
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr18:51812248-51811908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr18:56329131-56328774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
291, 0
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr18:49021699-49022062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr18:33064806-33064436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 81
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr18:54980364-54980738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr18:53586363-53585971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 366
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr18:56329719-56329319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
178, 174
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr18:43119939-43119537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 89
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr18:51400664-51401066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
372, 0
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr18:51812500-51812098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
174, 187
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr18:54980112-54980514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 80
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr18:54993204-54993606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:40324416-40324010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:42675189-42674783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 249
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:42744501-42744095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 347
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:42792020-42792426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:42837552-42837146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 80
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:43120107-43119701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
371, 0
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:44398307-44397901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:53509370-53509776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:53525824-53526230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:54967836-54968240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 101
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:33064470-33064063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:40086382-40085981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
357, 173
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:40306553-40306959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 404
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:42744249-42743843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
372, 404
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:42744333-42743927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 404
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:49033082-49032676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:53560142-53560549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 0
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:53635492-53635086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
271, 266
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:54992868-54993275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 78
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:54993120-54993527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 172
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr18:40306385-40306792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
372, 404
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr18:54967587-54967991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr18:50059071-50058662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
103, 81
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:49032830-49032420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 365
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:51400580-51400990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 99
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:52433282-52433692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:54980196-54980605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:56494060-56494470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 0
               

               
Conread position:
               
3-439
               

               
Cow position:
               
chr18:56434177-56434616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 89
               

               
Conread position:
               
3-444
               

               
Cow position:
               
chr18:14453888-14453444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
3-444
               

               
Cow position:
               
chr18:56128673-56129117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
271, 266
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr18:49022610-49023066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr18:56434346-56434674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 163
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr18:52428186-52428515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
165, 173
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr18:52433367-52433696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
174, 170
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr18:53635407-53635052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr18:52447241-52447647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 81
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr18:43175223-43174814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
356, 364
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr18:51367798-51367389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
4-452
               

               
Cow position:
               
chr18:52428438-52428890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
210, 206
               

               
Conread position:
               
4-452
               

               
Cow position:
               
chr18:52433619-52434071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
210, 206
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr18:43174801-43174493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr18:51400834-51401148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr18:43174886-43174557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
229, 225
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr18:44184332-44183994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 163
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr18:42837466-42837117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr18:44397885-44397524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr18:52446990-52447353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
209, 202
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr18:42791014-42791382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
91, 77
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr18:56316603-56316974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr18:42693746-42693348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr18:53586277-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 307
               

               
Conread position:
               
5-402
               

               
Cow position:
               
chr18:41948878-41948478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
170, 163
               

               
Conread position:
               
5-402
               

               
Cow position:
               
chr18:51400498-51400898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
355, 364
               

               
Conread position:
               
5-402
               

               
Cow position:
               
chr18:51752366-51751969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
5-406
               

               
Cow position:
               
chr18:42791602-42792006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
5-409
               

               
Cow position:
               
chr18:49033332-49032925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 0
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr18:53560228-53560636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 0
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr18:40324582-40324131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
345, 330
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr18:41949046-41948595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
355, 418
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr18:1418305-1418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr18:54968257-54968554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
81, 77
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr18:42693913-42693588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr18:40306640-40306967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
94, 86
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr18:40075074-40075402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr18:50848974-50849303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr18:51765275-51764946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
258, 246
               

               
Conread position:
               
6-339
               

               
Cow position:
               
chr18:53498695-53499029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr18:41198382-41198716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr18:42792359-42792699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr18:43048677-43048325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr18:56128256-56128609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
272, 278
               

               
Conread position:
               
6-370
               

               
Cow position:
               
chr18:42827539-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 86
               

               
Conread position:
               
6-370
               

               
Cow position:
               
chr18:55066723-55066359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 178
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr18:49032491-49032125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr18:53525911-53526277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 78
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr18:53586612-53586246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr18:49032995-49032628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 362
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr18:56316436-56316804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
206, 216
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr18:40075326-40075700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 362
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr18:42693997-42693598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr18:42744414-42744011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr18:44154316-44153914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr18:44184583-44184180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr18:50059488-50059085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
166, 183
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr18:52012056-52011653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
355, 362
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:42693493-42693090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 77
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:42837633-42837230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:43093283-43092879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:44254004-44253605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:50099110-50099514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
159, 167
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:51400751-51401155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
371, 0
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:53560397-53560797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 362
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:54979527-54979931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:54979779-54980183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:55066807-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 322
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr18:22634691-22635095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr18:40324833-40324429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
227, 223
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr18:42791351-42791755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 81
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr18:50083669-50084073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 100
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr18:51368467-51368063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr18:53509457-53509861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 78
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr18:53559893-53560297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 82
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr18:53587116-53586712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr18:49032743-49032337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr18:42985090-42984683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr18:43093367-43092960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 175
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr18:49032659-49032252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 362
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr18:53525743-53526150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr18:53560313-53560720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr18:41197710-41198117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
356, 401
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr18:41198298-41198705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
369, 401
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr18:41197794-41198209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
356, 0
               

               
Conread position:
               
6-423
               

               
Cow position:
               
chr18:1418137-1418557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 0
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr18:52447411-52447851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
6-452
               

               
Cow position:
               
chr18:54993543-54993990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
253, 239
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr18:44397799-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr18:49032406-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
168, 174
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr18:53571947-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
7-393
               

               
Cow position:
               
chr18:53559978-53560367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 357
               

               
Conread position:
               
7-402
               

               
Cow position:
               
chr18:42791436-42791834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:53509542-53509945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 263
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:53525996-53526399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 0
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:55066974-55066571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 361
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr18:50022012-50021745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr18:42744075-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
8-331
               

               
Cow position:
               
chr18:50048666-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 83
               

               
Conread position:
               
8-331
               

               
Cow position:
               
chr18:50083923-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 130
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr18:56247759-56247408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 8
               

               
Conread position:
               
8-373
               

               
Cow position:
               
chr18:55066889-55066524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
8-380
               

               
Cow position:
               
chr18:53498613-53498986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
8-406
               

               
Cow position:
               
chr18:50848555-50848957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
5, 361
               

               
Conread position:
               
8-406
               

               
Cow position:
               
chr18:55523361-55523762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
319, 358
               

               
Conread position:
               
8-406
               

               
Cow position:
               
chr18:56316186-56316587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
8-407
               

               
Cow position:
               
chr18:50083839-50084241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
8-407
               

               
Cow position:
               
chr18:55008696-55009098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
94, 84
               

               
Conread position:
               
8-410
               

               
Cow position:
               
chr18:42985508-42985102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
5, 83
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr18:52427687-52428011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
9-338
               

               
Cow position:
               
chr18:55523530-55523858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
9-367
               

               
Cow position:
               
chr18:50281980-50282339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
181, 175
               

               
Conread position:
               
9-367
               

               
Cow position:
               
chr18:50295494-50295853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 97
               

               
Conread position:
               
9-377
               

               
Cow position:
               
chr18:50271767-50272135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr18:43093448-43093047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr18:54979446-54979847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 172
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr18:54979698-54980099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr18:54992706-54993107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 97
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr18:55017934-55018335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 362
               

               
Conread position:
               
9-408
               

               
Cow position:
               
chr18:41197629-41198030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
9-408
               

               
Cow position:
               
chr18:41198217-41198618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
9-408
               

               
Cow position:
               
chr18:50099281-50099682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
9-408
               

               
Cow position:
               
chr18:50246299-50246700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
24, 20
               

               
Conread position:
               
9-409
               

               
Cow position:
               
chr18:1418056-1418459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 113
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr18:33064380-33063976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 357
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr18:50246383-50246787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr18:51874194-51874598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr18:52433036-52433440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr18:55523698-55524102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
324, 341
               

               
Conread position:
               
9-447
               

               
Cow position:
               
chr18:50246131-50246572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 97
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr18:53609908-53609676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
221, 206
               

               
Conread position:
               
10-305
               

               
Cow position:
               
chr18:42827627-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
10-331
               

               
Cow position:
               
chr18:54979615-54979936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 77
               

               
Conread position:
               
10-331
               

               
Cow position:
               
chr18:56128848-56129169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr18:44253668-44253346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
177, 167
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr18:51368043-51367721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
234, 0
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr18:53635317-53634994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr18:44253261-44252930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr18:50848726-50849067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr18:49021622-49021971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr18:53635905-53635556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 274
               

               
Conread position:
               
10-367
               

               
Cow position:
               
chr18:42792195-42792553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
10-370
               

               
Cow position:
               
chr18:42693657-42693293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
202, 212
               

               
Conread position:
               
10-376
               

               
Cow position:
               
chr18:56316524-56316890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
167, 171
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr18:40086632-40086232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr18:41197546-41197941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr18:51812409-51812014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 72
               

               
Conread position:
               
10-403
               

               
Cow position:
               
chr18:42960076-42959689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr18:42674846-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr18:42675014-42674615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr18:43168099-43168498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr18:56329376-56328977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr18:42985421-42985022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr18:50059568-50059169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
350, 397
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr18:54967090-54967490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
249, 241
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr18:43093531-43093131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 363
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr18:44397964-44397562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 171
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr18:43093195-43092793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 77
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr18:53610160-53609757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
264, 259
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr18:56248104-56247691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
251, 205
               

               
Conread position:
               
10-452
               

               
Cow position:
               
chr18:44398132-44397686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 171
               

               
Conread position:
               
10-452
               

               
Cow position:
               
chr18:44398216-44397770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
11-302
               

               
Cow position:
               
chr18:50271853-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
156, 165
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chr18:55066634-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
11-325
               

               
Cow position:
               
chr18:55523952-55524266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 167
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr18:40086542-40086218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
11-343
               

               
Cow position:
               
chr18:55008867-55009199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
11-352
               

               
Cow position:
               
chr18:50246553-50246889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
161, 156
               

               
Conread position:
               
11-383
               

               
Cow position:
               
chr18:43168184-43168556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
11-402
               

               
Cow position:
               
chr18:51839337-51838943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
11-406
               

               
Cow position:
               
chr18:43167932-43168330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
95, 76
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr18:40074995-40075394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr18:42674929-42674531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
163, 157
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr18:42675097-42674698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
87, 80
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr18:42694076-42693677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr18:44398383-44397984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 0
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr18:54966923-54967322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 95
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr18:56434102-56434500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
11-410
               

               
Cow position:
               
chr18:43168016-43168418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
328, 362
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr18:53635568-53635160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 357
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr18:56128597-56129005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
349, 357
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr18:1417974-1418385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr18:55018188-55018601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
11-427
               

               
Cow position:
               
chr18:56329543-56329127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
328, 335
               

               
Conread position:
               
11-440
               

               
Cow position:
               
chr18:40306225-40306657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
11-440
               

               
Cow position:
               
chr18:40324744-40324312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
218, 224
               

               
Conread position:
               
12-217
               

               
Cow position:
               
chr18:1418395-1418600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-219
               

               
Cow position:
               
chr18:44184157-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
12-249
               

               
Cow position:
               
chr18:42959663-42959426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-286
               

               
Cow position:
               
chr18:42984747-42984473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
12-286
               

               
Cow position:
               
chr18:44240570-44240844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-307
               

               
Cow position:
               
chr18:14453147-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr18:55018609-55018904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
101, 97
               

               
Conread position:
               
12-311
               

               
Cow position:
               
chr18:55524037-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
12-332
               

               
Cow position:
               
chr18:56434606-56434926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
12-334
               

               
Cow position:
               
chr18:40086039-40085724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
301, 26
               

               
Conread position:
               
12-335
               

               
Cow position:
               
chr18:43119846-43119523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr18:42674676-42674355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
172, 144
               

               
Conread position:
               
12-352
               

               
Cow position:
               
chr18:42744156-42743816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-358
               

               
Cow position:
               
chr18:53610242-53609893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
323, 0
               

               
Conread position:
               
12-367
               

               
Cow position:
               
chr18:56329206-56328850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 0
               

               
Conread position:
               
12-370
               

               
Cow position:
               
chr18:43022342-43021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr18:49033157-49032796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
348, 356
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr18:50246050-50246411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
157, 168
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr18:50281899-50282260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
327, 332
               

               
Conread position:
               
12-374
               

               
Cow position:
               
chr18:49022955-49023317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
12-374
               

               
Cow position:
               
chr18:56330130-56329768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
12-391
               

               
Cow position:
               
chr18:14453963-14453581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
280, 264
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr18:43022762-43022371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
12-401
               

               
Cow position:
               
chr18:50058894-50058502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
348, 0
               

               
Conread position:
               
12-402
               

               
Cow position:
               
chr18:43093613-43093220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
348, 356
               

               
Conread position:
               
12-402
               

               
Cow position:
               
chr18:50048998-50048605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 124
               

               
Conread position:
               
12-402
               

               
Cow position:
               
chr18:52447921-52448315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 323
               

               
Conread position:
               
12-404
               

               
Cow position:
               
chr18:44154058-44153670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:43022930-43022533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 94
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:43175551-43175154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 71
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:44240066-44240463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:44240402-44240799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:53509631-53510027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 175
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:55523785-55524182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
237, 250
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:55523869-55524266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
153, 166
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:56329794-56329397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:42960242-42959844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:43175467-43175069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
124, 113
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:50059230-50058832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:50099368-50099766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:50271686-50272084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 169
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:52447081-52447479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
251, 238
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:52447669-52448067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 356
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:54967344-54967739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
76, 71
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:54993045-54993443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
75, 71
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:55018357-55018756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 71
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:55523449-55523847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 359
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:56433773-56434164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
118, 243
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr18:40324323-40323926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr18:42837963-42837565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
348, 356
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr18:50271518-50271916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 71
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr18:52428614-52429012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
341, 361
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr18:54979951-54980352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr18:55067053-55066655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 361
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr18:56433857-56434248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 164
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr18:42675264-42674863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr18:42792281-42792682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 80
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr18:49022787-49023188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr18:50021839-50021435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 166
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr18:50048830-50048429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
177, 173
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr18:52428278-52428679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
12-414
               

               
Cow position:
               
chr18:52433795-52434197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
341, 361
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr18:53635987-53635581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr18:52011966-52011554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chr18:50083591-50084001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
348, 400
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chr18:50271434-50271844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
117, 130
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chr18:56329626-56329216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
12-440
               

               
Cow position:
               
chr18:50295413-50295844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
12-442
               

               
Cow position:
               
chr18:50048746-50048313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
218, 199
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr18:14453230-14452835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr18:42791106-42791502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
362, 394
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr18:42827462-42827859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr18:54967009-54967405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
13-408
               

               
Cow position:
               
chr18:14453314-14452916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
88, 72
               

               
Conread position:
               
13-409
               

               
Cow position:
               
chr18:51752190-51751794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
13-410
               

               
Cow position:
               
chr18:53635734-53635334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
199, 209
               

               
Conread position:
               
13-410
               

               
Cow position:
               
chr18:56128431-56128831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
199, 209
               

               
Conread position:
               
13-410
               

               
Cow position:
               
chr18:56329877-56329477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 0
               

               
Conread position:
               
13-423
               

               
Cow position:
               
chr18:40306731-40307141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
261, 256
               

               
Conread position:
               
13-427
               

               
Cow position:
               
chr18:49033240-49032826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
177, 172
               

               
Conread position:
               
13-439
               

               
Cow position:
               
chr18:40306479-40306908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
362, 394
               

               
Conread position:
               
15-331
               

               
Cow position:
               
chr18:33064122-33063806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-332
               

               
Cow position:
               
chr18:33092962-33092645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
15-407
               

               
Cow position:
               
chr18:22634534-22634927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
15-407
               

               
Cow position:
               
chr18:33064290-33063895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
321, 356
               

               
Conread position:
               
15-407
               

               
Cow position:
               
chr18:33064542-33064148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 251
               

               
Conread position:
               
15-408
               

               
Cow position:
               
chr18:41198055-41198450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
15-465
               

               
Cow position:
               
chr18:40306901-40307355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
91, 87
               

               
Conread position:
               
16-299
               

               
Cow position:
               
chr18:40075420-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
196, 202
               

               
Conread position:
               
16-406
               

               
Cow position:
               
chr18:42984911-42984518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
16-406
               

               
Cow position:
               
chr18:43023007-43022617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
16-406
               

               
Cow position:
               
chr18:53559735-53560128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 126
               

               
Conread position:
               
16-407
               

               
Cow position:
               
chr18:42744656-42744262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
161, 165
               

               
Conread position:
               
16-407
               

               
Cow position:
               
chr18:53571872-53572253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
173, 127
               

               
Conread position:
               
16-407
               

               
Cow position:
               
chr18:53586518-53586124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 0
               

               
Conread position:
               
16-410
               

               
Cow position:
               
chr18:50848479-50848877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 72
               

               
Conread position:
               
16-417
               

               
Cow position:
               
chr18:1417895-1418299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr18:52433212-52433528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
17-402
               

               
Cow position:
               
chr18:42744571-42744183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 234
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr18:42837790-42837398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 234
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr18:43120009-43119617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr18:53526090-53526481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 170
               

               
Conread position:
               
17-407
               

               
Cow position:
               
chr18:42837706-42837314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 351
               

               
Conread position:
               
17-407
               

               
Cow position:
               
chr18:55008455-55008846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
17-408
               

               
Cow position:
               
chr18:41197973-41198366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
17-408
               

               
Cow position:
               
chr18:42675343-42674950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 87
               

               
Conread position:
               
17-443
               

               
Cow position:
               
chr18:52427863-52428292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
18-297
               

               
Cow position:
               
chr18:43022252-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-326
               

               
Cow position:
               
chr18:50245975-50246280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
18-332
               

               
Cow position:
               
chr18:51766100-51765789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
18-373
               

               
Cow position:
               
chr18:49032899-49032544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
342, 350
               

               
Conread position:
               
18-373
               

               
Cow position:
               
chr18:53586936-53586581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-400
               

               
Cow position:
               
chr18:52012380-52011995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
195, 203
               

               
Conread position:
               
18-406
               

               
Cow position:
               
chr18:53586432-53586041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 0
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr18:53586768-53586377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 247
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr18:55523623-55524015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
18-408
               

               
Cow position:
               
chr18:33064203-33063811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
18-409
               

               
Cow position:
               
chr18:49032563-49032169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 350
               

               
Conread position:
               
18-409
               

               
Cow position:
               
chr18:56316280-56316674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr18:56493991-56494386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 350
               

               
Conread position:
               
18-436
               

               
Cow position:
               
chr18:56329452-56329035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 350
               

               
Conread position:
               
19-406
               

               
Cow position:
               
chr18:54967183-54967573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
19-406
               

               
Cow position:
               
chr18:56329283-56328893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
19-407
               

               
Cow position:
               
chr18:43120175-43119785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
19-407
               

               
Cow position:
               
chr18:51789493-51789102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
19-408
               

               
Cow position:
               
chr18:50099543-50099934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
314, 352
               

               
Conread position:
               
19-408
               

               
Cow position:
               
chr18:51812652-51812260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
171, 166
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr18:42985580-42985186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr18:52447592-52447986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
341, 349
               

               
Conread position:
               
19-422
               

               
Cow position:
               
chr18:56330039-56329636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
19-452
               

               
Cow position:
               
chr18:52447844-52448281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 349
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr18:50849240-50849484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
20-306
               

               
Cow position:
               
chr18:44184233-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
20-335
               

               
Cow position:
               
chr18:44184485-44184170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
160, 152
               

               
Conread position:
               
20-340
               

               
Cow position:
               
chr18:56128102-56128422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
20-343
               

               
Cow position:
               
chr18:56248176-56247856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
20-347
               

               
Cow position:
               
chr18:42959739-42959412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
20-362
               

               
Cow position:
               
chr18:42693311-42692968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 72
               

               
Conread position:
               
20-367
               

               
Cow position:
               
chr18:42791701-42792049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
167, 157
               

               
Conread position:
               
20-373
               

               
Cow position:
               
chr18:41948695-41948342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
20-377
               

               
Cow position:
               
chr18:42791281-42791638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
153, 162
               

               
Conread position:
               
20-406
               

               
Cow position:
               
chr18:43022586-43022197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 77
               

               
Conread position:
               
20-406
               

               
Cow position:
               
chr18:44184653-44184264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
342, 318
               

               
Conread position:
               
20-406
               

               
Cow position:
               
chr18:44240242-44240631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
65, 77
               

               
Conread position:
               
20-407
               

               
Cow position:
               
chr18:43022838-43022449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
322, 353
               

               
Conread position:
               
20-407
               

               
Cow position:
               
chr18:43120258-43119868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
243, 219
               

               
Conread position:
               
20-407
               

               
Cow position:
               
chr18:43174955-43174566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
20-407
               

               
Cow position:
               
chr18:50083767-50084157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
340, 0
               

               
Conread position:
               
20-407
               

               
Cow position:
               
chr18:54992801-54993191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
20-407
               

               
Cow position:
               
chr18:55018113-55018503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
20-408
               

               
Cow position:
               
chr18:33093041-33092651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
170, 165
               

               
Conread position:
               
20-408
               

               
Cow position:
               
chr18:50099880-50100270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
109, 122
               

               
Conread position:
               
20-408
               

               
Cow position:
               
chr18:50246226-50246616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
20-409
               

               
Cow position:
               
chr18:50059306-50058914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr18:33064621-33064228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr18:42791533-42791926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr18:50848400-50848793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr18:52428118-52428511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr18:52428370-52428763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
340, 348
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr18:52433551-52433944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
340, 348
               

               
Conread position:
               
21-244
               

               
Cow position:
               
chr18:22634958-22635181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
21-307
               

               
Cow position:
               
chr18:40251157-40251434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
270, 66
               

               
Conread position:
               
21-322
               

               
Cow position:
               
chr18:49021801-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr18:33092872-33092562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr18:50281740-50282050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr18:51874374-51874690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
21-344
               

               
Cow position:
               
chr18:51765596-51765273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
21-358
               

               
Cow position:
               
chr18:54968188-54968525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-365
               

               
Cow position:
               
chr18:51812566-51812221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
21-368
               

               
Cow position:
               
chr18:56247417-56247073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
339, 44
               

               
Conread position:
               
21-373
               

               
Cow position:
               
chr18:51752101-51751749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
21-376
               

               
Cow position:
               
chr18:56267478-56267123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
339, 348
               

               
Conread position:
               
21-377
               

               
Cow position:
               
chr18:42791198-42791554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
21-402
               

               
Cow position:
               
chr18:51367613-51367229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
21-402
               

               
Cow position:
               
chr18:51765680-51765296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
21-402
               

               
Cow position:
               
chr18:51765932-51765548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
253, 237
               

               
Conread position:
               
21-406
               

               
Cow position:
               
chr18:50848653-50849041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:22634790-22635179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:42984990-42984601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
339, 347
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:44239823-44240212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:50083516-50083905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
339, 0
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:50849073-50849462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:51969657-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:54968104-54968493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:55008961-55009348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:55017778-55018167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 336
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr18:55017862-55018251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
21-408
               

               
Cow position:
               
chr18:33064704-33064315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
21-408
               

               
Cow position:
               
chr18:51789407-51789017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
168, 163
               

               
Conread position:
               
21-408
               

               
Cow position:
               
chr18:53498203-53498596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 246
               

               
Conread position:
               
21-408
               

               
Cow position:
               
chr18:53587017-53586628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 241
               

               
Conread position:
               
21-409
               

               
Cow position:
               
chr18:50058969-50058578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
318, 352
               

               
Conread position:
               
21-410
               

               
Cow position:
               
chr18:42791870-42792262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
339, 347
               

               
Conread position:
               
21-410
               

               
Cow position:
               
chr18:43022501-43022109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
333, 315
               

               
Conread position:
               
21-410
               

               
Cow position:
               
chr18:49022880-49023272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr18:42791786-42792187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr18:56434279-56434682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
21-452
               

               
Cow position:
               
chr18:40074921-40075356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
23-407
               

               
Cow position:
               
chr18:54967772-54968157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
24-410
               

               
Cow position:
               
chr18:51400265-51400654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
25-402
               

               
Cow position:
               
chr18:52427535-52427915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
335, 343
               

               
Conread position:
               
25-402
               

               
Cow position:
               
chr18:52432884-52433264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
335, 343
               

               
Conread position:
               
25-452
               

               
Cow position:
               
chr18:44154382-44153951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
26-328
               

               
Cow position:
               
chr18:22634879-22635181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
26-332
               

               
Cow position:
               
chr18:52446927-52447233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
26-402
               

               
Cow position:
               
chr18:54980051-54980430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
26-402
               

               
Cow position:
               
chr18:54993479-54993858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
26-406
               

               
Cow position:
               
chr18:54993395-54993778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
27-405
               

               
Cow position:
               
chr18:33064867-33064485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 242
               

               
Conread position:
               
27-407
               

               
Cow position:
               
chr18:55008631-55009014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
241, 246
               

               
Conread position:
               
28-409
               

               
Cow position:
               
chr18:53525681-53526065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 327
               

               
Conread position:
               
28-410
               

               
Cow position:
               
chr18:53509227-53509612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 327
               

               
Conread position:
               
29-344
               

               
Cow position:
               
chr18:56128027-56128342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
29-408
               

               
Cow position:
               
chr18:53636138-53635757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
336, 378
               

               
Conread position:
               
30-317
               

               
Cow position:
               
chr18:51839066-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr18:53609972-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
30-333
               

               
Cow position:
               
chr18:52428044-52428347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
30-374
               

               
Cow position:
               
chr18:56267553-56267209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
30-406
               

               
Cow position:
               
chr18:44184811-44184432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
30-407
               

               
Cow position:
               
chr18:22634631-22635011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
30-407
               

               
Cow position:
               
chr18:42792467-42792847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
330, 339
               

               
Conread position:
               
30-407
               

               
Cow position:
               
chr18:44253816-44253437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
30-408
               

               
Cow position:
               
chr18:42744726-42744346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
30-410
               

               
Cow position:
               
chr18:41948937-41948554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
30-410
               

               
Cow position:
               
chr18:42791963-42792346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
330, 0
               

               
Conread position:
               
30-410
               

               
Cow position:
               
chr18:43048737-43048354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
30-410
               

               
Cow position:
               
chr18:44239748-44240131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
30-410
               

               
Cow position:
               
chr18:44253732-44253350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
30-410
               

               
Cow position:
               
chr18:52433477-52433860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
30-452
               

               
Cow position:
               
chr18:43094003-43093589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
336, 283
               

               
Conread position:
               
31-406
               

               
Cow position:
               
chr18:53560086-53560464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
31-407
               

               
Cow position:
               
chr18:54966775-54967154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
31-407
               

               
Cow position:
               
chr18:54992560-54992939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
344, 0
               

               
Conread position:
               
31-408
               

               
Cow position:
               
chr18:54979888-54980267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
31-448
               

               
Cow position:
               
chr18:54979300-54979721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
197, 204
               

               
Conread position:
               
32-393
               

               
Cow position:
               
chr18:56316126-56316490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
343, 0
               

               
Conread position:
               
32-402
               

               
Cow position:
               
chr18:51839400-51839027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
32-408
               

               
Cow position:
               
chr18:50099724-50100102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
157, 151
               

               
Conread position:
               
33-344
               

               
Cow position:
               
chr18:56128787-56129098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 52
               

               
Conread position:
               
33-406
               

               
Cow position:
               
chr18:50022409-50022030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
33-407
               

               
Cow position:
               
chr18:55067116-55066739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 229
               

               
Conread position:
               
39-291
               

               
Cow position:
               
chr18:40251562-40251810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
164, 76
               

               
Conread position:
               
39-406
               

               
Cow position:
               
chr18:42675489-42675119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
321, 0
               

               
Conread position:
               
39-408
               

               
Cow position:
               
chr18:53498311-53498679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
296, 140
               

               
Conread position:
               
40-406
               

               
Cow position:
               
chr18:55523308-55523678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 311
               

               
Conread position:
               
44-359
               

               
Cow position:
               
chr18:56330182-56329867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
48-332
               

               
Cow position:
               
chr18:43120314-43120030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
48-334
               

               
Cow position:
               
chr18:40324203-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
255, 0
               

               
Conread position:
               
48-400
               

               
Cow position:
               
chr18:50848344-50848699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
48-406
               

               
Cow position:
               
chr18:49033373-49033012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
48-408
               

               
Cow position:
               
chr18:43093661-43093299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
48-422
               

               
Cow position:
               
chr18:41197501-41197874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
48-423
               

               
Cow position:
               
chr18:50083291-50083669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
123, 112
               

               
Conread position:
               
48-451
               

               
Cow position:
               
chr18:43175263-43174856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
312, 320
               

               
Conread position:
               
50-343
               

               
Cow position:
               
chr18:53571822-53572115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 127
               

               
Conread position:
               
50-408
               

               
Cow position:
               
chr18:53559685-53560045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
310, 357
               

               
Conread position:
               
50-408
               

               
Cow position:
               
chr18:54966878-54967238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
310, 314
               

               
Conread position:
               
50-410
               

               
Cow position:
               
chr18:51839550-51839187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
51-373
               

               
Cow position:
               
chr18:56316061-56316383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
51-391
               

               
Cow position:
               
chr18:40324872-40324529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
309, 317
               

               
Conread position:
               
51-420
               

               
Cow position:
               
chr18:55497694-55497322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
309, 318
               

               
Conread position:
               
51-439
               

               
Cow position:
               
chr18:40306181-40306572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
122, 131
               

               
Conread position:
               
52-339
               

               
Cow position:
               
chr18:51969354-51969639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
52-402
               

               
Cow position:
               
chr18:51789628-51789275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
52-407
               

               
Cow position:
               
chr18:14454007-14453649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
53-339
               

               
Cow position:
               
chr18:51839127-51838841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
54-410
               

               
Cow position:
               
chr18:43175593-43175234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
54-452
               

               
Cow position:
               
chr18:44398424-44398022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 0
               

               
Conread position:
               
55-373
               

               
Cow position:
               
chr18:50059691-50059373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
305, 314
               

               
Conread position:
               
55-402
               

               
Cow position:
               
chr18:41949332-41948982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
305, 0
               

               
Conread position:
               
57-306
               

               
Cow position:
               
chr18:56433403-56433651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
57-380
               

               
Cow position:
               
chr18:42827422-42827745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-417
               

               
Cow position:
               
chr18:50295374-50295737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
114, 125
               

               
Conread position:
               
61-279
               

               
Cow position:
               
chr18:53572350-53572568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-338
               

               
Cow position:
               
chr18:55075112-55075388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr18:44253867-44253520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
64-407
               

               
Cow position:
               
chr18:42790905-42791251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
281, 309
               

               
Conread position:
               
64-407
               

               
Cow position:
               
chr18:54992677-54993023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
192, 181
               

               
Conread position:
               
64-475
               

               
Cow position:
               
chr18:54979417-54979827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
296, 300
               

               
Conread position:
               
66-407
               

               
Cow position:
               
chr18:53587140-53586797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
66-407
               

               
Cow position:
               
chr18:56433743-56434089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
150, 187
               

               
Conread position:
               
66-408
               

               
Cow position:
               
chr18:56247786-56247446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
201, 214
               

               
Conread position:
               
71-407
               

               
Cow position:
               
chr18:50271408-50271747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 192
               

               
Conread position:
               
76-407
               

               
Cow position:
               
chr18:55008346-55008678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
299, 207
               

               
Conread position:
               
78-373
               

               
Cow position:
               
chr18:49021606-49021901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
184, 176
               

               
Conread position:
               
86-352
               

               
Cow position:
               
chr18:56433348-56433613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
99-405
               

               
Cow position:
               
chr18:14454043-14453735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
261, 7
               

               
Conread position:
               
102-402
               

               
Cow position:
               
chr18:51368624-51368320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 107
               

               
Conread position:
               
105-409
               

               
Cow position:
               
chr18:43175290-43174983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
273, 0
               

               
Conread position:
               
112-333
               

               
Cow position:
               
chr18:33093117-33092896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
112-373
               

               
Cow position:
               
chr18:51873690-51873950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
248, 18
               

               
Conread position:
               
113-406
               

               
Cow position:
               
chr18:42744727-42744431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
113-411
               

               
Cow position:
               
chr18:52446930-52447231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
247, 270
               

               
Conread position:
               
116-410
               

               
Cow position:
               
chr18:55523301-55523598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
259, 0
               

               
Conread position:
               
121-406
               

               
Cow position:
               
chr18:42827402-42827690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
239, 0
               

               
Conread position:
               
121-410
               

               
Cow position:
               
chr18:56316047-56316339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
239, 247
               

               
Conread position:
               
123-373
               

               
Cow position:
               
chr18:40251562-40251808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 72
               

               
Conread position:
               
138-410
               

               
Cow position:
               
chr18:41949333-41949058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
222, 226
               

               
Conread position:
               
146-445
               

               
Cow position:
               
chr18:55075111-55075414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 0
               
Show alignments to all cow chromosomes.