Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053K24.3.5 |
| Conread position: | 1-406 |
| Cow position: | chr2:78755380-78755784 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 176, 6 |
| Conread position: | 2-402 |
| Cow position: | chr2:82799655-82800058 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 373, 0 |
| Conread position: | 2-406 |
| Cow position: | chr2:82799571-82799978 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 0 |
| Conread position: | 3-289 |
| Cow position: | chr2:82800160-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 79 |
| Conread position: | 3-335 |
| Cow position: | chr2:86465816-86466148 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 80 |
| Conread position: | 3-452 |
| Cow position: | chr2:82799908-82800361 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 296 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 174, 179 |
| Conread position: | 5-408 |
| Cow position: | chr2:78754964-78755368 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 270 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 164, 170 |
| Conread position: | 6-380 |
| Cow position: | chr2:48689409-48689035 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 172, 176 |
| Conread position: | 6-406 |
| Cow position: | chr2:78754881-78755284 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 162, 183 |
| Conread position: | 6-406 |
| Cow position: | chr2:86465483-86465886 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 98, 86 |
| Conread position: | 6-407 |
| Cow position: | chr2:78754311-78754712 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 128 |
| Conread position: | 7-408 |
| Cow position: | chr2:78755636-78756038 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 167, 32 |
| Conread position: | 8-347 |
| Cow position: | chr2:5874627-5874287 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 181, 177 |
| Conread position: | 10-359 |
| Cow position: | chr2:5875129-5874780 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 329, 340 |
| Conread position: | 10-428 |
| Cow position: | chr2:82799747-82800165 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 402 |
| Conread position: | 10-439 |
| Cow position: | chr2:82799495-82799923 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 402 |
| Conread position: | 11-365 |
| Cow position: | chr2:5874456-5874102 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 12-407 |
| Cow position: | chr2:78755307-78755701 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 16-373 |
| Cow position: | chr2:82800089-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-401 |
| Cow position: | chr2:82799838-82800225 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 343, 351 |
| Conread position: | 18-326 |
| Cow position: | chr2:48689480-48689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 20-332 |
| Cow position: | chr2:86465329-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-410 |
| Cow position: | chr2:78754811-78755204 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 314, 323 |
| Conread position: | 33-406 |
| Cow position: | chr2:82800022-82800398 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 59 |
| Conread position: | 48-408 |
| Cow position: | chr2:48689534-48689172 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 52-428 |
| Cow position: | chr2:82799453-82799829 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 326, 360 |
| Conread position: | 55-330 |
| Cow position: | chr2:78754442-78754716 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 29 |
Show alignments to all cow chromosomes.