Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053K24.3.5 |
| Conread position: | 1-300 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-300 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-402 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 1-406 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 114, 83 |
| Conread position: | 1-407 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 177, 187 |
| Conread position: | 1-409 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 188, 177 |
| Conread position: | 1-409 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 359, 367 |
| Conread position: | 1-410 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 2-376 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 187, 175 |
| Conread position: | 3-336 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-402 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 348, 380 |
| Conread position: | 3-406 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 95, 79 |
| Conread position: | 3-407 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 357, 361 |
| Conread position: | 3-407 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 361 |
| Conread position: | 3-408 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 3-408 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 365 |
| Conread position: | 3-410 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 357, 361 |
| Conread position: | 3-428 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 332, 341 |
| Conread position: | 4-406 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 5-363 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 172, 176 |
| Conread position: | 5-402 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 78 |
| Conread position: | 5-402 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 70, 78 |
| Conread position: | 5-407 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 363 |
| Conread position: | 5-408 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 369, 401 |
| Conread position: | 6-358 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 75 |
| Conread position: | 6-406 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 258 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 354, 0 |
| Conread position: | 6-407 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 78 |
| Conread position: | 6-407 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 329, 360 |
| Conread position: | 6-407 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 95, 78 |
| Conread position: | 7-373 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 353, 362 |
| Conread position: | 9-407 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 351, 359 |
| Conread position: | 9-407 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 112 |
| Conread position: | 9-407 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 75 |
| Conread position: | 9-407 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 86, 75 |
| Conread position: | 9-410 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 0 |
| Conread position: | 10-402 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 10-407 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 171 |
| Conread position: | 10-410 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 73, 84 |
| Conread position: | 11-296 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 160, 168 |
| Conread position: | 11-297 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 72 |
| Conread position: | 11-343 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 90, 80 |
| Conread position: | 11-372 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 355 |
| Conread position: | 11-407 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 11-407 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 202, 211 |
| Conread position: | 11-408 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 90, 81 |
| Conread position: | 11-408 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 349, 356 |
| Conread position: | 11-409 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 357 |
| Conread position: | 11-410 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 363, 0 |
| Conread position: | 11-410 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 86, 72 |
| Conread position: | 11-417 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 71 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 78 |
| Conread position: | 12-331 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 86, 71 |
| Conread position: | 12-373 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 12-377 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 357 |
| Conread position: | 12-407 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 357 |
| Conread position: | 12-410 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 331 |
| Conread position: | 12-410 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 348, 0 |
| Conread position: | 12-417 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 14-410 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 157, 161 |
| Conread position: | 18-299 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 155, 165 |
| Conread position: | 18-331 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 83, 73 |
| Conread position: | 20-331 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 84, 76 |
| Conread position: | 20-373 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 20-407 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 86 |
| Conread position: | 20-421 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 72 |
| Conread position: | 21-365 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 146 |
| Conread position: | 21-400 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 339, 0 |
| Conread position: | 21-406 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 85, 71 |
| Conread position: | 26-410 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 71 |
| Conread position: | 29-410 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 30-410 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 30-410 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 313, 305 |
| Conread position: | 30-428 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 32-410 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 60 |
| Conread position: | 33-331 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 39-380 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 39-409 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 44-407 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 283, 339 |
| Conread position: | 44-410 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 45-402 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 315, 323 |
| Conread position: | 50-406 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 51-402 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 51-402 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 309, 0 |
| Conread position: | 66-410 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 111, 116 |
| Conread position: | 112-410 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 248, 256 |
| Conread position: | 135-454 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 225, 233 |
| Conread position: | 141-408 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 234, 266 |
| Conread position: | 141-427 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 231, 266 |
| Conread position: | 173-410 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 175, 200 |
| Conread position: | 173-410 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 175, 200 |
| Conread position: | 193-407 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 88, 76 |
Show alignments to all cow chromosomes.