Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053K24.3.5 |
| Conread position: | 1-373 |
| Cow position: | chr24:17077882-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 188, 184 |
| Conread position: | 1-427 |
| Cow position: | chr24:17035663-17035237 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 83 |
| Conread position: | 1-429 |
| Cow position: | chr24:17035495-17035062 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 189, 184 |
| Conread position: | 2-210 |
| Cow position: | chr24:17070839-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-393 |
| Cow position: | chr24:17035746-17035352 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 358, 366 |
| Conread position: | 3-232 |
| Cow position: | chr24:17013293-17013521 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 3-335 |
| Cow position: | chr24:17036165-17035833 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 135, 139 |
| Conread position: | 3-365 |
| Cow position: | chr24:17077964-17077601 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 99 |
| Conread position: | 3-377 |
| Cow position: | chr24:17070672-17071046 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 133 |
| Conread position: | 3-408 |
| Cow position: | chr24:17036417-17036009 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 3-408 |
| Cow position: | chr24:17070504-17070911 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 301 |
| Conread position: | 3-408 |
| Cow position: | chr24:17078216-17077809 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 3-410 |
| Cow position: | chr24:17036081-17035671 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 368, 0 |
| Conread position: | 3-410 |
| Cow position: | chr24:17070588-17070998 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 0 |
| Conread position: | 3-427 |
| Cow position: | chr24:17078132-17077708 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 89 |
| Conread position: | 5-428 |
| Cow position: | chr24:17035827-17035404 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 355, 359 |
| Conread position: | 8-402 |
| Cow position: | chr24:17070424-17070822 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 10-408 |
| Cow position: | chr24:17035990-17035590 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 350, 396 |
| Conread position: | 10-410 |
| Cow position: | chr24:17036242-17035839 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 350, 358 |
| Conread position: | 11-294 |
| Cow position: | chr24:17070764-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 11-317 |
| Cow position: | chr24:17013217-17013522 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 172 |
| Conread position: | 11-410 |
| Cow position: | chr24:17078040-17077638 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 174 |
| Conread position: | 11-427 |
| Cow position: | chr24:17036493-17036077 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 364, 396 |
| Conread position: | 11-428 |
| Cow position: | chr24:17036574-17036160 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 349, 15 |
| Conread position: | 12-408 |
| Cow position: | chr24:17035904-17035505 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 85, 72 |
| Conread position: | 18-410 |
| Cow position: | chr24:17078285-17077890 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 328, 353 |
| Conread position: | 52-343 |
| Cow position: | chr24:17013174-17013465 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-343 |
| Cow position: | chr24:16986440-16986647 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 130, 121 |
Show alignments to all cow chromosomes.