Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053K24.3.5 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 82 |
| Conread position: | 1-407 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 0 |
| Conread position: | 1-410 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 359, 388 |
| Conread position: | 1-410 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 124, 6 |
| Conread position: | 1-410 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 1-423 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 181, 6 |
| Conread position: | 1-427 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 367 |
| Conread position: | 2-410 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 9 |
| Conread position: | 2-427 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 412 |
| Conread position: | 3-286 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 62 |
| Conread position: | 3-309 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 174, 178 |
| Conread position: | 3-331 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-359 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-364 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 357, 0 |
| Conread position: | 3-366 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 357, 77 |
| Conread position: | 3-371 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 209, 219 |
| Conread position: | 3-372 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 3-377 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 357, 161 |
| Conread position: | 3-402 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 0 |
| Conread position: | 3-406 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 357, 365 |
| Conread position: | 3-408 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 3-408 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 365 |
| Conread position: | 3-410 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 268 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 128, 118 |
| Conread position: | 3-410 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 249 |
| Conread position: | 5-408 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 6-246 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 65, 80 |
| Conread position: | 6-250 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 117, 133 |
| Conread position: | 6-323 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-331 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 6-359 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-371 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 206, 132 |
| Conread position: | 6-377 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 362 |
| Conread position: | 6-380 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 171, 176 |
| Conread position: | 7-359 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 183, 177 |
| Conread position: | 7-418 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 8-295 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 8-335 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 129 |
| Conread position: | 8-359 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 182, 176 |
| Conread position: | 10-298 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 10-343 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 74 |
| Conread position: | 10-407 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 350, 397 |
| Conread position: | 10-407 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 92, 77 |
| Conread position: | 10-408 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 96, 90 |
| Conread position: | 10-410 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 11-406 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 170 |
| Conread position: | 11-407 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 11-427 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 11-458 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 403 |
| Conread position: | 12-332 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 12-334 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 246, 252 |
| Conread position: | 12-353 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 12-406 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 177, 172 |
| Conread position: | 12-408 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 395 |
| Conread position: | 12-410 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 0 |
| Conread position: | 12-417 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 80 |
| Conread position: | 12-425 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 83 |
| Conread position: | 15-397 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 281, 108 |
| Conread position: | 15-406 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 0 |
| Conread position: | 17-340 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-408 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 19-410 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 158 |
| Conread position: | 20-326 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 21-353 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-419 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 312, 71 |
| Conread position: | 22-423 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 23-331 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 33-347 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 35-347 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 39-406 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 175, 166 |
| Conread position: | 39-407 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 41-406 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 291, 330 |
| Conread position: | 44-359 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 48-287 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 48-408 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 48-408 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 49-408 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 54-410 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 126, 120 |
| Conread position: | 57-427 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 69-379 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 103-433 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 123-415 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 125-408 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 131-408 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 244, 276 |
| Conread position: | 132-371 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 132-410 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 207, 239 |
| Conread position: | 133-330 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-410 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 186, 125 |
Show alignments to all cow chromosomes.