Cow genome map
Conread name: | Ss1.1-Pig4-TMW8053K24.3.5 |
Conread position: | 1-337 |
Cow position: | chr25:18642212-18641873 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 216 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 95, 82 |
Conread position: | 1-407 |
Cow position: | chr25:34770165-34769756 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 374, 0 |
Conread position: | 1-410 |
Cow position: | chr25:33298522-33298934 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 269 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 359, 388 |
Conread position: | 1-410 |
Cow position: | chr25:36800675-36801086 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 273 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 124, 6 |
Conread position: | 1-410 |
Cow position: | chr25:36800843-36801254 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 10 |
Conread position: | 1-423 |
Cow position: | chr25:33298607-33299031 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 280 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 181, 6 |
Conread position: | 1-427 |
Cow position: | chr25:34769829-34769403 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 367 |
Conread position: | 2-410 |
Cow position: | chr25:33298776-33299186 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 351, 9 |
Conread position: | 2-427 |
Cow position: | chr25:33157429-33157004 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 412 |
Conread position: | 3-286 |
Cow position: | chr25:366770-367053 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 182 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 57, 62 |
Conread position: | 3-309 |
Cow position: | chr25:33127931-33128237 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 202 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 174, 178 |
Conread position: | 3-331 |
Cow position: | chr25:25652989-25653317 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 201 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-359 |
Cow position: | chr25:25652401-25652757 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 223 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-364 |
Cow position: | chr25:33145059-33145421 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 239 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 357, 0 |
Conread position: | 3-366 |
Cow position: | chr25:34763042-34763403 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 219 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 357, 77 |
Conread position: | 3-371 |
Cow position: | chr25:346493-346861 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 225 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 209, 219 |
Conread position: | 3-372 |
Cow position: | chr25:34763375-34763741 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 220 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 3-377 |
Cow position: | chr25:34762958-34763329 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 225 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 357, 161 |
Conread position: | 3-402 |
Cow position: | chr25:33157344-33156942 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 0 |
Conread position: | 3-406 |
Cow position: | chr25:34447151-34447557 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 266 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 357, 365 |
Conread position: | 3-408 |
Cow position: | chr25:33127679-33128086 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 15 |
Conread position: | 3-408 |
Cow position: | chr25:33157176-33156769 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 365 |
Conread position: | 3-410 |
Cow position: | chr25:33144894-33145301 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 268 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 128, 118 |
Conread position: | 3-410 |
Cow position: | chr25:34447235-34447645 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 269, 249 |
Conread position: | 5-408 |
Cow position: | chr25:33299366-33299772 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 266 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 88, 78 |
Conread position: | 6-246 |
Cow position: | chr25:34432984-34433224 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 162 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 65, 80 |
Conread position: | 6-250 |
Cow position: | chr25:34714250-34714494 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 160 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 117, 133 |
Conread position: | 6-323 |
Cow position: | chr25:34763126-34763443 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 192 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-331 |
Cow position: | chr25:33299031-33299356 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 214 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 71, 91 |
Conread position: | 6-359 |
Cow position: | chr25:25652236-25652589 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 224 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-371 |
Cow position: | chr25:34447574-34447928 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 234 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 206, 132 |
Conread position: | 6-377 |
Cow position: | chr25:33127850-33128221 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 362 |
Conread position: | 6-380 |
Cow position: | chr25:22235961-22236335 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 233 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 171, 176 |
Conread position: | 7-359 |
Cow position: | chr25:25652489-25652841 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 215 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 183, 177 |
Conread position: | 7-418 |
Cow position: | chr25:33157508-33157094 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 8-295 |
Cow position: | chr25:33145148-33145435 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 189 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 67, 98 |
Conread position: | 8-335 |
Cow position: | chr25:34714167-34714495 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 208 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 5, 129 |
Conread position: | 8-359 |
Cow position: | chr25:25652658-25653009 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 222 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 182, 176 |
Conread position: | 10-298 |
Cow position: | chr25:326975-327263 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 185 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 63, 76 |
Conread position: | 10-343 |
Cow position: | chr25:34447410-34447741 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 74 |
Conread position: | 10-407 |
Cow position: | chr25:33298867-33299266 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 256 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 350, 397 |
Conread position: | 10-407 |
Cow position: | chr25:34446990-34447390 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 265 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 92, 77 |
Conread position: | 10-408 |
Cow position: | chr25:33299287-33299687 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 264 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 96, 90 |
Conread position: | 10-410 |
Cow position: | chr25:23420435-23420838 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 74 |
Conread position: | 11-406 |
Cow position: | chr25:34769987-34769589 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 170 |
Conread position: | 11-407 |
Cow position: | chr25:33299204-33299603 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 251 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 95, 81 |
Conread position: | 11-427 |
Cow position: | chr25:34763299-34763712 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 256 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 95, 81 |
Conread position: | 11-458 |
Cow position: | chr25:34769651-34769200 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 349, 403 |
Conread position: | 12-332 |
Cow position: | chr25:34732554-34732233 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 202 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 60, 85 |
Conread position: | 12-334 |
Cow position: | chr25:34714088-34714410 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 209 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 246, 252 |
Conread position: | 12-353 |
Cow position: | chr25:414804-414469 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 216 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 60, 52 |
Conread position: | 12-406 |
Cow position: | chr25:36800937-36801334 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 257 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 177, 172 |
Conread position: | 12-408 |
Cow position: | chr25:34769902-34769504 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 348, 395 |
Conread position: | 12-410 |
Cow position: | chr25:33157251-33156850 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 363, 0 |
Conread position: | 12-417 |
Cow position: | chr25:33305265-33304862 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 265 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 93, 80 |
Conread position: | 12-425 |
Cow position: | chr25:23420353-23420766 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 83 |
Conread position: | 15-397 |
Cow position: | chr25:34433497-34433879 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 246 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 281, 108 |
Conread position: | 15-406 |
Cow position: | chr25:34770067-34769673 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 345, 0 |
Conread position: | 17-340 |
Cow position: | chr25:23420526-23420849 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 216 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-408 |
Cow position: | chr25:33305425-33305037 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 252 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 84, 22 |
Conread position: | 19-410 |
Cow position: | chr25:34447335-34447727 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 158 |
Conread position: | 20-326 |
Cow position: | chr25:22235891-22236197 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 212 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 52, 64 |
Conread position: | 21-353 |
Cow position: | chr25:25652923-25653255 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 212 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 21-419 |
Cow position: | chr25:33305819-33305421 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 245 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 312, 71 |
Conread position: | 22-423 |
Cow position: | chr25:36800611-36801015 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 272 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 23, 7 |
Conread position: | 23-331 |
Cow position: | chr25:33306397-33306098 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 197 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 81, 60 |
Conread position: | 33-347 |
Cow position: | chr25:326486-326802 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 197 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 35-347 |
Cow position: | chr25:34732615-34732303 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 199 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 40, 51 |
Conread position: | 39-406 |
Cow position: | chr25:33144846-33145213 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 237 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 175, 166 |
Conread position: | 39-407 |
Cow position: | chr25:36801372-36801743 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 236 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 67, 53 |
Conread position: | 41-406 |
Cow position: | chr25:36800798-36801166 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 245 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 291, 330 |
Conread position: | 44-359 |
Cow position: | chr25:366727-367042 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 206 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 16, 20 |
Conread position: | 48-287 |
Cow position: | chr25:427335-427574 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 158 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 57, 35 |
Conread position: | 48-408 |
Cow position: | chr25:22235835-22236198 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 244 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 44, 36 |
Conread position: | 48-408 |
Cow position: | chr25:36801549-36801912 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 235 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 58, 44 |
Conread position: | 49-408 |
Cow position: | chr25:34713873-34714234 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 229 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 25, 40 |
Conread position: | 54-410 |
Cow position: | chr25:23420311-23420670 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 236 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 126, 120 |
Conread position: | 57-427 |
Cow position: | chr25:34446953-34447323 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 249 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 41, 33 |
Conread position: | 69-379 |
Cow position: | chr25:326951-327260 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 202 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 37, 26 |
Conread position: | 103-433 |
Cow position: | chr25:33157580-33157243 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 225 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 48, 60 |
Conread position: | 123-415 |
Cow position: | chr25:36800546-36800839 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 196 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 90, 11 |
Conread position: | 125-408 |
Cow position: | chr25:346447-346733 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 183 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 250, 0 |
Conread position: | 131-408 |
Cow position: | chr25:366730-367009 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 180 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 244, 276 |
Conread position: | 132-371 |
Cow position: | chr25:427335-427574 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 155 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 132-410 |
Cow position: | chr25:33298485-33298766 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 184 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 207, 239 |
Conread position: | 133-330 |
Cow position: | chr25:34433027-34433224 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 132 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 147-410 |
Cow position: | chr25:33305943-33305683 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 174 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 186, 125 |
Show alignments to all cow chromosomes.