Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053K24.3.5 |
| Conread position: | 1-377 |
| Cow position: | chr6:49396174-49396544 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 1-409 |
| Cow position: | chr6:49340867-49341278 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 105 |
| Conread position: | 3-394 |
| Cow position: | chr6:49341037-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 357, 0 |
| Conread position: | 3-407 |
| Cow position: | chr6:49340365-49340772 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 103 |
| Conread position: | 3-407 |
| Cow position: | chr6:49340449-49340855 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 370 |
| Conread position: | 3-407 |
| Cow position: | chr6:49340953-49341360 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 370 |
| Conread position: | 3-426 |
| Cow position: | chr6:49340701-49341124 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 411 |
| Conread position: | 3-428 |
| Cow position: | chr6:49340533-49340958 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 358 |
| Conread position: | 5-343 |
| Cow position: | chr6:49396256-49396594 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-427 |
| Cow position: | chr6:49340791-49341209 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 398 |
| Conread position: | 20-346 |
| Cow position: | chr6:49429130-49429456 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-350 |
| Cow position: | chr6:49396356-49396685 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 245, 253 |
| Conread position: | 21-407 |
| Cow position: | chr6:49340635-49341024 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 85 |
| Conread position: | 33-302 |
| Cow position: | chr6:49362330-49362599 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 89 |
Show alignments to all cow chromosomes.