Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053K24.3.5 |
| Conread position: | 1-302 |
| Cow position: | chrX:29044964-29044663 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 1-406 |
| Cow position: | chrX:25324704-25324296 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 337, 359 |
| Conread position: | 2-359 |
| Cow position: | chrX:13826819-13826463 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 257, 11 |
| Conread position: | 2-407 |
| Cow position: | chrX:25309850-25310258 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 264 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 335, 371 |
| Conread position: | 2-407 |
| Cow position: | chrX:25309935-25310342 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 3-298 |
| Cow position: | chrX:25324534-25324239 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 104, 89 |
| Conread position: | 3-322 |
| Cow position: | chrX:14181261-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-411 |
| Cow position: | chrX:25325542-25325132 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 89 |
| Conread position: | 6-359 |
| Cow position: | chrX:13826900-13826547 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 75, 80 |
| Conread position: | 6-380 |
| Cow position: | chrX:29045044-29044668 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 0 |
| Conread position: | 6-407 |
| Cow position: | chrX:25324951-25324548 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 263 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 100, 86 |
| Conread position: | 6-407 |
| Cow position: | chrX:25325203-25324799 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 329, 337 |
| Conread position: | 6-408 |
| Cow position: | chrX:25309770-25310175 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 6-410 |
| Cow position: | chrX:13826732-13826325 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 7-452 |
| Cow position: | chrX:29045295-29044846 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 222, 227 |
| Conread position: | 8-223 |
| Cow position: | chrX:29044875-29044658 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 8-407 |
| Cow position: | chrX:25324782-25324379 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 9-303 |
| Cow position: | chrX:29045692-29045400 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 93, 97 |
| Conread position: | 9-407 |
| Cow position: | chrX:25325032-25324631 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 366, 0 |
| Conread position: | 10-367 |
| Cow position: | chrX:25325367-25325009 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 95, 73 |
| Conread position: | 11-391 |
| Cow position: | chrX:25310195-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 79, 83 |
| Conread position: | 11-402 |
| Cow position: | chrX:25310027-25310421 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 11-410 |
| Cow position: | chrX:25324862-25324460 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 95 |
| Conread position: | 12-439 |
| Cow position: | chrX:25310112-25310542 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 20-442 |
| Cow position: | chrX:25309702-25310125 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 30 |
| Conread position: | 21-344 |
| Cow position: | chrX:14181327-14181004 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-400 |
| Cow position: | chrX:25324600-25324220 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 148, 169 |
| Conread position: | 21-406 |
| Cow position: | chrX:25325104-25324716 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 21-407 |
| Cow position: | chrX:25325272-25324884 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 258 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 21-447 |
| Cow position: | chrX:29045113-29044682 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 352 |
| Conread position: | 30-412 |
| Cow position: | chrX:29045755-29045370 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 253 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 31-407 |
| Cow position: | chrX:25325598-25325220 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 302, 340 |
| Conread position: | 51-407 |
| Cow position: | chrX:29045167-29044808 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 51-408 |
| Cow position: | chrX:25325830-25325471 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 210, 223 |
| Conread position: | 57-407 |
| Cow position: | chrX:29045329-29044976 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 282, 316 |
| Conread position: | 112-407 |
| Cow position: | chrX:29045757-29045459 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 118-407 |
| Cow position: | chrX:13826953-13826664 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 5 |
Show alignments to all cow chromosomes.