Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-893
               

               Cow position:
               
               

               Alignm length:
               938
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 69
               

               Conread position:
               1-946
               

               Cow position:
               
               

               Alignm length:
               993
               

               Alignm identity:
               610
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               2-464
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               79, 27
               

               Conread position:
               2-464
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               217, 80
               

               Conread position:
               2-472
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               82, 112
               

               Conread position:
               6-410
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 70
               

               Conread position:
               7-376
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               77, 61
               

               Conread position:
               7-761
               

               Cow position:
               
               

               Alignm length:
               800
               

               Alignm identity:
               499
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               117, 25
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-351
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 157
               

               Conread position:
               8-417
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 62
               

               Conread position:
               8-429
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-476
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               304
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               107, 68
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               200, 41
               

               Conread position:
               8-561
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-582
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               387
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-766
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 156
               

               Conread position:
               8-766
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-783
               

               Cow position:
               
               

               Alignm length:
               830
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-788
               

               Cow position:
               
               

               Alignm length:
               828
               

               Alignm identity:
               510
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-828
               

               Cow position:
               
               

               Alignm length:
               869
               

               Alignm identity:
               539
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-830
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               537
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-842
               

               Cow position:
               
               

               Alignm length:
               890
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               929
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               936
               

               Alignm identity:
               580
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               933
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               8-883
               

               Cow position:
               
               

               Alignm length:
               935
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-883
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               580
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 69
               

               Conread position:
               8-885
               

               Cow position:
               
               

               Alignm length:
               935
               

               Alignm identity:
               590
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               947
               

               Alignm identity:
               592
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               117, 68
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               598
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 29
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               951
               

               Alignm identity:
               598
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 55
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               590
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               948
               

               Alignm identity:
               603
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               588
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               974
               

               Alignm identity:
               602
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               962
               

               Alignm identity:
               593
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-925
               

               Cow position:
               
               

               Alignm length:
               978
               

               Alignm identity:
               608
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               11-298
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-320
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               11-881
               

               Cow position:
               
               

               Alignm length:
               917
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               11-881
               

               Cow position:
               
               

               Alignm length:
               924
               

               Alignm identity:
               565
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               11-881
               

               Cow position:
               
               

               Alignm length:
               925
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 65
               

               Conread position:
               13-460
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               14-297
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               14-893
               

               Cow position:
               
               

               Alignm length:
               931
               

               Alignm identity:
               580
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               110, 62
               

               Conread position:
               14-893
               

               Cow position:
               
               

               Alignm length:
               928
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               15-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               15-416
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               15-849
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               539
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               15-897
               

               Cow position:
               
               

               Alignm length:
               933
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 52
               

               Conread position:
               16-883
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               571
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               16-906
               

               Cow position:
               
               

               Alignm length:
               948
               

               Alignm identity:
               601
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               16-909
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               583
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 6
               

               Conread position:
               16-933
               

               Cow position:
               
               

               Alignm length:
               978
               

               Alignm identity:
               595
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 52
               

               Conread position:
               19-562
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               373
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               213, 50
               

               Conread position:
               20-410
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 48
               

               Conread position:
               23-893
               

               Cow position:
               
               

               Alignm length:
               929
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               24-910
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 52
               

               Conread position:
               25-934
               

               Cow position:
               
               

               Alignm length:
               956
               

               Alignm identity:
               596
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               59, 52
               

               Conread position:
               33-400
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               42-868
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               534
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               62-893
               

               Cow position:
               
               

               Alignm length:
               888
               

               Alignm identity:
               553
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               12, 240
               

               Conread position:
               70-555
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               77-868
               

               Cow position:
               
               

               Alignm length:
               814
               

               Alignm identity:
               501
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               85-410
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               39, 170
               

               Conread position:
               99-574
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 67
               

               Conread position:
               115-397
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 266
               

               Conread position:
               130-788
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               437
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               27, 250
               

               Conread position:
               135-527
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               136-410
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               158-540
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               164-411
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 214
               

               Conread position:
               175-893
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               477
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               33, 53
               

               Conread position:
               186-396
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               186-555
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               190-557
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 76
               

               Conread position:
               206-843
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               419
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               207-620
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               27, 280
               

               Conread position:
               231-790
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               368
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               236-946
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               475
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               257-538
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               260-929
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               393-849
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               292
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               210, 74
               

               Conread position:
               490-946
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               301
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               585-941
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               149, 7
               

               Conread position:
               618-941
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               185, 136
               

               Conread position:
               619-948
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               158, 140
               

               Conread position:
               621-923
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 65
               

               Conread position:
               621-946
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               621-946
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               169, 18
               

               Conread position:
               625-942
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               172, 181
               

               Conread position:
               626-831
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               164, 34
               

               Conread position:
               628-898
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               628-918
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               98, 177
               

               Conread position:
               628-933
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               179, 168
               

               Conread position:
               632-779
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 12
               

               Conread position:
               634-923
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 7
               

               Conread position:
               690-930
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               699-945
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 137
               

               Conread position:
               702-937
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 34
               
Show alignments to all cow chromosomes.