Cow genome map

Conread name: Ss1.1-Pig4-TMW8053L10.5

Conread position: 1-893
Cow position: chr10:1663589-1662666 (view UCSC Genome Browser custom track)
Alignm length: 938
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 69

Conread position: 1-946
Cow position: chr10:32827122-32828086 (view UCSC Genome Browser custom track)
Alignm length: 993
Alignm identity: 610
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 38, 59

Conread position: 2-294
Cow position: chr10:20268322-20268019 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 84, 66

Conread position: 2-464
Cow position: chr10:19543053-19542586 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 305
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 27

Conread position: 2-464
Cow position: chr10:65732748-65733220 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 300
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 217, 80

Conread position: 2-472
Cow position: chr10:32559549-32560014 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 295
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 112

Conread position: 6-410
Cow position: chr10:4560188-4559792 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 262
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 70

Conread position: 7-376
Cow position: chr10:40821610-40821228 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 61

Conread position: 7-761
Cow position: chr10:25004305-25005085 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 499
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 117, 25

Conread position: 8-297
Cow position: chr10:53172942-53172641 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 24, 28

Conread position: 8-351
Cow position: chr10:31855858-31856214 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 28

Conread position: 8-357
Cow position: chr10:61133519-61133870 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 157

Conread position: 8-417
Cow position: chr10:57505852-57506263 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 62

Conread position: 8-429
Cow position: chr10:2118648-2118214 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 256
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 60

Conread position: 8-475
Cow position: chr10:21738350-21737859 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 325
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 28

Conread position: 8-476
Cow position: chr10:3287740-3287263 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 304
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 107, 68

Conread position: 8-477
Cow position: chr10:24100702-24100227 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 310
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 200, 41

Conread position: 8-561
Cow position: chr10:46762586-46763144 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 375
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 28

Conread position: 8-582
Cow position: chr10:41879315-41879904 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 387
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 60

Conread position: 8-766
Cow position: chr10:33868808-33868008 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 156

Conread position: 8-766
Cow position: chr10:51950718-51949921 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-783
Cow position: chr10:32008454-32009269 (view UCSC Genome Browser custom track)
Alignm length: 830
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-788
Cow position: chr10:38842542-38843360 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 510
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 79, 62

Conread position: 8-828
Cow position: chr10:40348278-40347421 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 539
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 24, 28

Conread position: 8-830
Cow position: chr10:21426921-21426067 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 537
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 116, 68

Conread position: 8-842
Cow position: chr10:35824965-35824088 (view UCSC Genome Browser custom track)
Alignm length: 890
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-881
Cow position: chr10:14333466-14332545 (view UCSC Genome Browser custom track)
Alignm length: 929
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-881
Cow position: chr10:19142232-19141313 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 580
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 74, 62

Conread position: 8-881
Cow position: chr10:26293110-26292193 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 53

Conread position: 8-883
Cow position: chr10:23848341-23849265 (view UCSC Genome Browser custom track)
Alignm length: 935
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-883
Cow position: chr10:32086067-32086980 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 69

Conread position: 8-885
Cow position: chr10:32703141-32704063 (view UCSC Genome Browser custom track)
Alignm length: 935
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr10:25564174-25563247 (view UCSC Genome Browser custom track)
Alignm length: 947
Alignm identity: 592
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 117, 68

Conread position: 8-893
Cow position: chr10:32364319-32365246 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 29

Conread position: 8-893
Cow position: chr10:39210139-39211080 (view UCSC Genome Browser custom track)
Alignm length: 951
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr10:44706331-44705402 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 55

Conread position: 8-893
Cow position: chr10:47909001-47909922 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 590
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 24, 35

Conread position: 8-893
Cow position: chr10:48375068-48374138 (view UCSC Genome Browser custom track)
Alignm length: 948
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr10:57554960-57554029 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-921
Cow position: chr10:8292509-8293466 (view UCSC Genome Browser custom track)
Alignm length: 974
Alignm identity: 602
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 79, 42

Conread position: 8-921
Cow position: chr10:37772271-37773215 (view UCSC Genome Browser custom track)
Alignm length: 962
Alignm identity: 593
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 116, 68

Conread position: 8-925
Cow position: chr10:51557775-51558741 (view UCSC Genome Browser custom track)
Alignm length: 978
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 11-298
Cow position: chr10:13851525-13851824 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 25

Conread position: 11-320
Cow position: chr10:17958463-17958784 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 57

Conread position: 11-881
Cow position: chr10:278971-278061 (view UCSC Genome Browser custom track)
Alignm length: 917
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 57

Conread position: 11-881
Cow position: chr10:30683110-30682197 (view UCSC Genome Browser custom track)
Alignm length: 924
Alignm identity: 565
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 75, 57

Conread position: 11-881
Cow position: chr10:30719074-30719991 (view UCSC Genome Browser custom track)
Alignm length: 925
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 65

Conread position: 13-460
Cow position: chr10:27787001-27787461 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 295
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 55

Conread position: 14-297
Cow position: chr10:15488926-15489216 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 22

Conread position: 14-893
Cow position: chr10:41159806-41160711 (view UCSC Genome Browser custom track)
Alignm length: 931
Alignm identity: 580
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 62

Conread position: 14-893
Cow position: chr10:52827230-52826322 (view UCSC Genome Browser custom track)
Alignm length: 928
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 54

Conread position: 15-294
Cow position: chr10:32280232-32280523 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 72, 55

Conread position: 15-416
Cow position: chr10:7896096-7895683 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 277
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 21

Conread position: 15-849
Cow position: chr10:62406385-62405513 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 539
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 109, 61

Conread position: 15-897
Cow position: chr10:41569494-41570412 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 52

Conread position: 16-883
Cow position: chr10:1379885-1380795 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 571
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 71, 54

Conread position: 16-906
Cow position: chr10:58673131-58672203 (view UCSC Genome Browser custom track)
Alignm length: 948
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 55

Conread position: 16-909
Cow position: chr10:24738296-24737378 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 583
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 6

Conread position: 16-933
Cow position: chr10:57987316-57986347 (view UCSC Genome Browser custom track)
Alignm length: 978
Alignm identity: 595
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 52

Conread position: 19-562
Cow position: chr10:7831140-7831671 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 373
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 213, 50

Conread position: 20-410
Cow position: chr10:28604215-28604613 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 266
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 48

Conread position: 23-893
Cow position: chr10:8681014-8681931 (view UCSC Genome Browser custom track)
Alignm length: 929
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 13

Conread position: 24-910
Cow position: chr10:19513626-19514554 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 52

Conread position: 25-934
Cow position: chr10:39264066-39264982 (view UCSC Genome Browser custom track)
Alignm length: 956
Alignm identity: 596
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 52

Conread position: 33-400
Cow position: chr10:19607950-19607573 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 43

Conread position: 42-868
Cow position: chr10:25651005-25650137 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 534
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 34

Conread position: 62-893
Cow position: chr10:19842100-19842978 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 553
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 12, 240

Conread position: 70-555
Cow position: chr10:32580674-32581174 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 330
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 88

Conread position: 77-868
Cow position: chr10:49502563-49503340 (view UCSC Genome Browser custom track)
Alignm length: 814
Alignm identity: 501
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 26

Conread position: 85-410
Cow position: chr10:27123094-27122759 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 213
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 170

Conread position: 99-574
Cow position: chr10:51212605-51213085 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 67

Conread position: 115-397
Cow position: chr10:54988347-54988642 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 266

Conread position: 130-788
Cow position: chr10:25633336-25632641 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 437
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 27, 250

Conread position: 135-527
Cow position: chr10:11941044-11940636 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 136-410
Cow position: chr10:28715746-28716028 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 29

Conread position: 158-540
Cow position: chr10:12669186-12669571 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 255
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 47

Conread position: 164-411
Cow position: chr10:44723968-44723711 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 214

Conread position: 175-893
Cow position: chr10:45647411-45648164 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 477
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 33, 53

Conread position: 186-396
Cow position: chr10:51846591-51846797 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 98

Conread position: 186-555
Cow position: chr10:17435853-17436206 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 240
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 40

Conread position: 190-557
Cow position: chr10:24957208-24956836 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 242
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 76

Conread position: 206-843
Cow position: chr10:24783295-24782646 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 419
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 95, 35

Conread position: 207-620
Cow position: chr10:57371171-57370753 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 291
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 27, 280

Conread position: 231-790
Cow position: chr10:29755995-29755432 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 368
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 68

Conread position: 236-946
Cow position: chr10:51407897-51408612 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 475
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 53

Conread position: 257-538
Cow position: chr10:10211865-10211571 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 27

Conread position: 260-929
Cow position: chr10:13426456-13425808 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 16

Conread position: 393-849
Cow position: chr10:19881058-19880604 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 292
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 210, 74

Conread position: 490-946
Cow position: chr10:16954683-16955150 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 301
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 82, 30

Conread position: 585-941
Cow position: chr10:2364622-2364273 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 149, 7

Conread position: 618-941
Cow position: chr10:38866232-38866553 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 215
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 185, 136

Conread position: 619-948
Cow position: chr10:60703999-60703671 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 158, 140

Conread position: 621-923
Cow position: chr10:1434162-1434467 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 65

Conread position: 621-946
Cow position: chr10:19719842-19719511 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 208, 0

Conread position: 621-946
Cow position: chr10:54151319-54151639 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 169, 18

Conread position: 625-942
Cow position: chr10:4702132-4701822 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 172, 181

Conread position: 626-831
Cow position: chr10:7246625-7246422 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 164, 34

Conread position: 628-898
Cow position: chr10:23866782-23866507 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 19

Conread position: 628-918
Cow position: chr10:25013886-25013591 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 177

Conread position: 628-933
Cow position: chr10:9581035-9580724 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 179, 168

Conread position: 632-779
Cow position: chr10:7832055-7832202 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 12

Conread position: 634-923
Cow position: chr10:13097234-13097526 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 7

Conread position: 690-930
Cow position: chr10:28999362-28999124 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 69

Conread position: 699-945
Cow position: chr10:23171858-23172111 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 137

Conread position: 702-937
Cow position: chr10:282987-282757 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 34

Show alignments to all cow chromosomes.