Cow genome map

Conread name: Ss1.1-Pig4-TMW8053L10.5

Conread position: 1-270
Cow position:
Alignm length: 284
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 1-946
Cow position:
Alignm length: 985
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 5

Conread position: 2-407
Cow position:
Alignm length: 420
Alignm identity: 273
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 84, 61

Conread position: 8-291
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 28

Conread position: 8-320
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 28

Conread position: 8-344
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 38

Conread position: 8-350
Cow position:
Alignm length: 355
Alignm identity: 226
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 60

Conread position: 8-411
Cow position:
Alignm length: 422
Alignm identity: 276
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 54

Conread position: 8-411
Cow position:
Alignm length: 423
Alignm identity: 283
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 28

Conread position: 8-411
Cow position:
Alignm length: 423
Alignm identity: 285
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 24, 28

Conread position: 8-460
Cow position:
Alignm length: 469
Alignm identity: 300
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 75, 60

Conread position: 8-475
Cow position:
Alignm length: 493
Alignm identity: 318
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 151

Conread position: 8-475
Cow position:
Alignm length: 496
Alignm identity: 319
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 28

Conread position: 8-475
Cow position:
Alignm length: 497
Alignm identity: 332
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 28

Conread position: 8-475
Cow position:
Alignm length: 497
Alignm identity: 329
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 28

Conread position: 8-475
Cow position:
Alignm length: 493
Alignm identity: 325
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 79, 62

Conread position: 8-475
Cow position:
Alignm length: 492
Alignm identity: 315
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 8-476
Cow position:
Alignm length: 504
Alignm identity: 319
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 62

Conread position: 8-524
Cow position:
Alignm length: 532
Alignm identity: 263
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 78, 60

Conread position: 8-661
Cow position:
Alignm length: 695
Alignm identity: 438
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 116, 60

Conread position: 8-783
Cow position:
Alignm length: 819
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-832
Cow position:
Alignm length: 874
Alignm identity: 544
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 60

Conread position: 8-881
Cow position:
Alignm length: 917
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 43

Conread position: 8-881
Cow position:
Alignm length: 924
Alignm identity: 570
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 116, 68

Conread position: 8-881
Cow position:
Alignm length: 920
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 59

Conread position: 8-881
Cow position:
Alignm length: 927
Alignm identity: 573
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 68

Conread position: 8-881
Cow position:
Alignm length: 929
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-883
Cow position:
Alignm length: 930
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 55

Conread position: 8-885
Cow position:
Alignm length: 929
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 8-893
Cow position:
Alignm length: 943
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position:
Alignm length: 943
Alignm identity: 593
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 116, 68

Conread position: 8-893
Cow position:
Alignm length: 938
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position:
Alignm length: 939
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 942
Alignm identity: 583
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 946
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-893
Cow position:
Alignm length: 940
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 527

Conread position: 8-893
Cow position:
Alignm length: 935
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 8-921
Cow position:
Alignm length: 974
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-921
Cow position:
Alignm length: 966
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-921
Cow position:
Alignm length: 977
Alignm identity: 606
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 24

Conread position: 9-360
Cow position:
Alignm length: 366
Alignm identity: 240
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 155

Conread position: 10-291
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 26

Conread position: 10-766
Cow position:
Alignm length: 784
Alignm identity: 484
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 53

Conread position: 10-790
Cow position:
Alignm length: 838
Alignm identity: 535
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 27, 166

Conread position: 11-285
Cow position:
Alignm length: 286
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 57

Conread position: 11-396
Cow position:
Alignm length: 396
Alignm identity: 257
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 135, 76

Conread position: 11-524
Cow position:
Alignm length: 544
Alignm identity: 356
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 111, 7

Conread position: 11-893
Cow position:
Alignm length: 942
Alignm identity: 588
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 25

Conread position: 11-946
Cow position:
Alignm length: 980
Alignm identity: 598
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 76, 35

Conread position: 14-297
Cow position:
Alignm length: 297
Alignm identity: 196
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 54

Conread position: 14-475
Cow position:
Alignm length: 486
Alignm identity: 305
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 110, 62

Conread position: 14-555
Cow position:
Alignm length: 567
Alignm identity: 359
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 110, 62

Conread position: 14-555
Cow position:
Alignm length: 566
Alignm identity: 366
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 22

Conread position: 14-893
Cow position:
Alignm length: 933
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 56

Conread position: 15-272
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 25

Conread position: 15-407
Cow position:
Alignm length: 407
Alignm identity: 264
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 53

Conread position: 15-410
Cow position:
Alignm length: 411
Alignm identity: 270
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 53

Conread position: 15-851
Cow position:
Alignm length: 883
Alignm identity: 538
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 72, 48

Conread position: 15-881
Cow position:
Alignm length: 919
Alignm identity: 550
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 109, 53

Conread position: 15-881
Cow position:
Alignm length: 921
Alignm identity: 567
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 109, 61

Conread position: 16-300
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 52

Conread position: 16-893
Cow position:
Alignm length: 925
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 23-475
Cow position:
Alignm length: 482
Alignm identity: 319
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 9, 13

Conread position: 23-883
Cow position:
Alignm length: 922
Alignm identity: 581
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 13

Conread position: 24-893
Cow position:
Alignm length: 915
Alignm identity: 554
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 63, 39

Conread position: 25-464
Cow position:
Alignm length: 461
Alignm identity: 299
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 127, 43

Conread position: 25-465
Cow position:
Alignm length: 458
Alignm identity: 301
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 168

Conread position: 33-504
Cow position:
Alignm length: 498
Alignm identity: 331
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 135

Conread position: 35-406
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 47, 28

Conread position: 35-466
Cow position:
Alignm length: 453
Alignm identity: 286
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 28

Conread position: 35-893
Cow position:
Alignm length: 914
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 37-881
Cow position:
Alignm length: 911
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 46-881
Cow position:
Alignm length: 900
Alignm identity: 553
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 30

Conread position: 52-945
Cow position:
Alignm length: 943
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 18

Conread position: 62-883
Cow position:
Alignm length: 878
Alignm identity: 549
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 25, 96

Conread position: 135-411
Cow position:
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 245

Conread position: 135-475
Cow position:
Alignm length: 364
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 245

Conread position: 149-532
Cow position:
Alignm length: 392
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 8

Conread position: 151-920
Cow position:
Alignm length: 816
Alignm identity: 501
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 64, 10

Conread position: 160-878
Cow position:
Alignm length: 767
Alignm identity: 478
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 217

Conread position: 160-893
Cow position:
Alignm length: 781
Alignm identity: 495
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 48, 83

Conread position: 168-464
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 210

Conread position: 175-757
Cow position:
Alignm length: 601
Alignm identity: 365
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 120

Conread position: 176-881
Cow position:
Alignm length: 756
Alignm identity: 462
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 345

Conread position: 179-879
Cow position:
Alignm length: 749
Alignm identity: 469
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 29, 199

Conread position: 180-945
Cow position:
Alignm length: 807
Alignm identity: 484
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 36, 404

Conread position: 195-881
Cow position:
Alignm length: 739
Alignm identity: 462
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 290

Conread position: 209-401
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 150

Conread position: 226-926
Cow position:
Alignm length: 736
Alignm identity: 461
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 12, 33

Conread position: 230-945
Cow position:
Alignm length: 751
Alignm identity: 461
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 54

Conread position: 269-842
Cow position:
Alignm length: 600
Alignm identity: 371
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 93

Conread position: 269-945
Cow position:
Alignm length: 709
Alignm identity: 448
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 7

Conread position: 311-828
Cow position:
Alignm length: 545
Alignm identity: 345
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 53

Conread position: 327-869
Cow position:
Alignm length: 577
Alignm identity: 361
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 164

Conread position: 400-943
Cow position:
Alignm length: 563
Alignm identity: 358
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 25

Conread position: 424-752
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 105

Conread position: 567-843
Cow position:
Alignm length: 288
Alignm identity: 189
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 176

Conread position: 587-866
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 35, 25

Conread position: 595-946
Cow position:
Alignm length: 365
Alignm identity: 232
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 144

Conread position: 621-930
Cow position:
Alignm length: 316
Alignm identity: 209
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 196, 37

Conread position: 621-930
Cow position:
Alignm length: 321
Alignm identity: 204
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 112, 64

Conread position: 621-941
Cow position:
Alignm length: 328
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 181, 25

Conread position: 621-942
Cow position:
Alignm length: 332
Alignm identity: 213
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 102

Conread position: 627-926
Cow position:
Alignm length: 305
Alignm identity: 198
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 190, 78

Conread position: 628-942
Cow position:
Alignm length: 322
Alignm identity: 201
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 162, 203

Conread position: 640-942
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 164

Conread position: 643-946
Cow position:
Alignm length: 312
Alignm identity: 208
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 36, 31

Conread position: 667-946
Cow position:
Alignm length: 289
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 201

Conread position: 667-946
Cow position:
Alignm length: 286
Alignm identity: 183
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 149, 212

Conread position: 669-941
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 218

Conread position: 690-923
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 62, 40

Conread position: 690-943
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 16

Conread position: 702-942
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 86, 26

Show alignments to all cow chromosomes.