Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-360
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               83, 67
               

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               136, 63
               

               Conread position:
               1-385
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               1-766
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               490
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               83, 67
               

               Conread position:
               1-773
               

               Cow position:
               
               

               Alignm length:
               824
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 55
               

               Conread position:
               2-359
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 23
               

               Conread position:
               8-356
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-359
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               318
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-545
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               8-732
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               8-782
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               490
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               8-783
               

               Cow position:
               
               

               Alignm length:
               826
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-868
               

               Cow position:
               
               

               Alignm length:
               902
               

               Alignm identity:
               544
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               931
               

               Alignm identity:
               580
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               919
               

               Alignm identity:
               570
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               922
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-883
               

               Cow position:
               
               

               Alignm length:
               916
               

               Alignm identity:
               561
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               40, 53
               

               Conread position:
               8-891
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               582
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               80, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               581
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               945
               

               Alignm identity:
               588
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-896
               

               Cow position:
               
               

               Alignm length:
               947
               

               Alignm identity:
               599
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               963
               

               Alignm identity:
               590
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 58
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               964
               

               Alignm identity:
               591
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               970
               

               Alignm identity:
               595
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               74, 34
               

               Conread position:
               11-272
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-356
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               14-455
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               303
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               70, 54
               

               Conread position:
               14-827
               

               Cow position:
               
               

               Alignm length:
               861
               

               Alignm identity:
               502
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               15-942
               

               Cow position:
               
               

               Alignm length:
               974
               

               Alignm identity:
               598
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               69, 55
               

               Conread position:
               16-400
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               228, 54
               

               Conread position:
               16-475
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               18-544
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               350
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               91, 45
               

               Conread position:
               23-376
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               62, 47
               

               Conread position:
               23-562
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               352
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               25-358
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               25-464
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               25-533
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               354
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               35-411
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               89, 41
               

               Conread position:
               35-893
               

               Cow position:
               
               

               Alignm length:
               924
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 35
               

               Conread position:
               42-475
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               294
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               44-941
               

               Cow position:
               
               

               Alignm length:
               949
               

               Alignm identity:
               612
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               56-460
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               56-893
               

               Cow position:
               
               

               Alignm length:
               889
               

               Alignm identity:
               541
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               62-410
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               88-788
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               476
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 406
               

               Conread position:
               117-506
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               196, 30
               

               Conread position:
               126-881
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               500
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               31, 194
               

               Conread position:
               132-475
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               135-475
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 245
               

               Conread position:
               135-893
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               506
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               150-562
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               159-881
               

               Cow position:
               
               

               Alignm length:
               772
               

               Alignm identity:
               474
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               159-941
               

               Cow position:
               
               

               Alignm length:
               829
               

               Alignm identity:
               535
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               175-881
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               470
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               33, 354
               

               Conread position:
               179-464
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 199
               

               Conread position:
               181-893
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               464
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 346
               

               Conread position:
               191-843
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               443
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 134
               

               Conread position:
               223-384
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               230-583
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               255-942
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               456
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               311-893
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               387
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 219
               

               Conread position:
               327-946
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               402
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               60, 125
               

               Conread position:
               400-945
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               365
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 67
               

               Conread position:
               487-843
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               489-871
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               592-926
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 193
               

               Conread position:
               595-921
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 282
               

               Conread position:
               597-871
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               194, 24
               

               Conread position:
               618-805
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               618-947
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               142, 20
               

               Conread position:
               619-776
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 67
               

               Conread position:
               623-868
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               701-945
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               77, 101
               
Show alignments to all cow chromosomes.