Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 53
               

               Conread position:
               1-410
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               2-857
               

               Cow position:
               
               

               Alignm length:
               893
               

               Alignm identity:
               539
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               2-893
               

               Cow position:
               
               

               Alignm length:
               952
               

               Alignm identity:
               593
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 74
               

               Conread position:
               7-881
               

               Cow position:
               
               

               Alignm length:
               917
               

               Alignm identity:
               546
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               117, 69
               

               Conread position:
               7-883
               

               Cow position:
               
               

               Alignm length:
               932
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 29
               

               Conread position:
               8-262
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-288
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               8-406
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               8-408
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               273
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               272
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-447
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               321
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-562
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-707
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               459
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-880
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               569
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               594
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               915
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               565
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               947
               

               Alignm identity:
               598
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               950
               

               Alignm identity:
               611
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               948
               

               Alignm identity:
               597
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               584
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               932
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 830
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-930
               

               Cow position:
               
               

               Alignm length:
               967
               

               Alignm identity:
               603
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 63
               

               Conread position:
               11-410
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               11-411
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-475
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               318
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               113, 57
               

               Conread position:
               15-329
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               15-341
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               67, 290
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               121, 35
               

               Conread position:
               15-410
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               15-415
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 48
               

               Conread position:
               15-883
               

               Cow position:
               
               

               Alignm length:
               928
               

               Alignm identity:
               575
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               133, 55
               

               Conread position:
               20-474
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               23-841
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               23-933
               

               Cow position:
               
               

               Alignm length:
               961
               

               Alignm identity:
               596
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               25-927
               

               Cow position:
               
               

               Alignm length:
               963
               

               Alignm identity:
               589
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               111, 45
               

               Conread position:
               30-445
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               35-411
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 122
               

               Conread position:
               35-881
               

               Cow position:
               
               

               Alignm length:
               902
               

               Alignm identity:
               549
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               36-881
               

               Cow position:
               
               

               Alignm length:
               901
               

               Alignm identity:
               554
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               47-384
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               52-893
               

               Cow position:
               
               

               Alignm length:
               899
               

               Alignm identity:
               556
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               100-397
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               147, 61
               

               Conread position:
               135-407
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               135-410
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               135-582
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               135-893
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 394
               

               Conread position:
               151-929
               

               Cow position:
               
               

               Alignm length:
               819
               

               Alignm identity:
               498
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               158-410
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               160-766
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               415
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               48, 328
               

               Conread position:
               175-475
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               175-900
               

               Cow position:
               
               

               Alignm length:
               770
               

               Alignm identity:
               487
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 141
               

               Conread position:
               181-893
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               479
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               27, 347
               

               Conread position:
               205-942
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               489
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               210-946
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               478
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               258-904
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               428
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 223
               

               Conread position:
               278-893
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               410
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               24, 252
               

               Conread position:
               283-922
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               423
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               289-545
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               16, 202
               

               Conread position:
               439-942
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               339
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               456-941
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               342
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               496-787
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               605-871
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 196
               

               Conread position:
               621-946
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 79
               

               Conread position:
               638-946
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               137, 145
               

               Conread position:
               643-894
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               86, 60
               

               Conread position:
               646-871
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               131, 80
               

               Conread position:
               666-866
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               666-943
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               675-946
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               676-894
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 57
               

               Conread position:
               694-947
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               93, 136
               
Show alignments to all cow chromosomes.