Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 67
               

               Conread position:
               1-543
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               369
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               130, 75
               

               Conread position:
               1-783
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               485
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               80, 99
               

               Conread position:
               2-410
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               73, 81
               

               Conread position:
               2-410
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               85, 44
               

               Conread position:
               2-790
               

               Cow position:
               
               

               Alignm length:
               824
               

               Alignm identity:
               512
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               81, 5
               

               Conread position:
               2-858
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               523
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               2-893
               

               Cow position:
               
               

               Alignm length:
               936
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 34
               

               Conread position:
               5-464
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               5-726
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 71
               

               Conread position:
               8-272
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               8-321
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               8-332
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               8-359
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-396
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               85, 68
               

               Conread position:
               8-429
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               8-457
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               310
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               320
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-828
               

               Cow position:
               
               

               Alignm length:
               872
               

               Alignm identity:
               538
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               921
               

               Alignm identity:
               568
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               922
               

               Alignm identity:
               565
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               936
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-883
               

               Cow position:
               
               

               Alignm length:
               932
               

               Alignm identity:
               560
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               588
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               948
               

               Alignm identity:
               599
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               935
               

               Alignm identity:
               584
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               584
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               588
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               938
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               590
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               973
               

               Alignm identity:
               604
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 60
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               964
               

               Alignm identity:
               592
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               72, 93
               

               Conread position:
               8-925
               

               Cow position:
               
               

               Alignm length:
               981
               

               Alignm identity:
               617
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-933
               

               Cow position:
               
               

               Alignm length:
               984
               

               Alignm identity:
               604
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               11-394
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               269
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               584
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               15-339
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               88, 48
               

               Conread position:
               15-397
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               15-410
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               109, 53
               

               Conread position:
               15-788
               

               Cow position:
               
               

               Alignm length:
               825
               

               Alignm identity:
               512
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               15-933
               

               Cow position:
               
               

               Alignm length:
               977
               

               Alignm identity:
               600
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               16-464
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               298
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               20-354
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               97, 50
               

               Conread position:
               23-407
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               63, 47
               

               Conread position:
               23-842
               

               Cow position:
               
               

               Alignm length:
               871
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               24-434
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               24-924
               

               Cow position:
               
               

               Alignm length:
               945
               

               Alignm identity:
               566
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               32-407
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               32-574
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               39-348
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 122
               

               Conread position:
               46-562
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               351
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               68-473
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               73-378
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               157, 77
               

               Conread position:
               92-400
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               33, 291
               

               Conread position:
               135-646
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 245
               

               Conread position:
               138-375
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               151-561
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               175-455
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               175-475
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 203
               

               Conread position:
               175-842
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               439
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 203
               

               Conread position:
               179-844
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               436
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               29, 104
               

               Conread position:
               236-942
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               433
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               250-926
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               434
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               33, 41
               

               Conread position:
               255-870
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               384
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               90, 21
               

               Conread position:
               260-912
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               432
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               293-567
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 149
               

               Conread position:
               311-893
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               396
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               311-893
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               389
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 517
               

               Conread position:
               595-946
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 141
               

               Conread position:
               599-867
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               614-826
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 36
               

               Conread position:
               618-914
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               124, 34
               

               Conread position:
               618-945
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               172, 239
               

               Conread position:
               618-946
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               199, 47
               

               Conread position:
               621-884
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 139
               

               Conread position:
               621-926
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               622-920
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               195, 254
               

               Conread position:
               623-926
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 102
               

               Conread position:
               626-926
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               28, 168
               

               Conread position:
               628-946
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               49, 105
               

               Conread position:
               638-931
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               179, 37
               

               Conread position:
               686-941
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               160, 33
               

               Conread position:
               690-923
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               163, 122
               

               Conread position:
               692-945
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               149, 44
               
Show alignments to all cow chromosomes.