Cow genome map

Conread name: Ss1.1-Pig4-TMW8053L10.5

Conread position: 1-464
Cow position: chr16:14620649-14620178 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 321
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 67

Conread position: 1-543
Cow position: chr16:36164380-36164930 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 369
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 130, 75

Conread position: 1-783
Cow position: chr16:43693463-43694242 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 485
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 80, 99

Conread position: 2-410
Cow position: chr16:25934768-25935186 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 260
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 81

Conread position: 2-410
Cow position: chr16:52590095-52589680 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 274
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 44

Conread position: 2-790
Cow position: chr16:22852614-22853419 (view UCSC Genome Browser custom track)
Alignm length: 824
Alignm identity: 512
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 81, 5

Conread position: 2-858
Cow position: chr16:42804371-42805232 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 523
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 82, 61

Conread position: 2-893
Cow position: chr16:20277462-20278386 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 34

Conread position: 5-464
Cow position: chr16:1566057-1565580 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 306
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 64

Conread position: 5-726
Cow position: chr16:52626984-52627730 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 71

Conread position: 8-272
Cow position: chr16:23319308-23319039 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 116, 62

Conread position: 8-321
Cow position: chr16:32836537-32836854 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 73, 60

Conread position: 8-332
Cow position: chr16:49743812-49743479 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 68

Conread position: 8-359
Cow position: chr16:47787573-47787937 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 24, 28

Conread position: 8-375
Cow position: chr16:53446156-53445776 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 28

Conread position: 8-396
Cow position: chr16:26652234-26652638 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 28

Conread position: 8-411
Cow position: chr16:26991333-26990914 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 276
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 85, 68

Conread position: 8-429
Cow position: chr16:48103712-48104143 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 273
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 48

Conread position: 8-457
Cow position: chr16:11284839-11285303 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 310
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 24, 28

Conread position: 8-464
Cow position: chr16:3144774-3144302 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 306
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 60

Conread position: 8-475
Cow position: chr16:41161849-41161362 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 320
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 78, 60

Conread position: 8-828
Cow position: chr16:34505315-34506176 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 538
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 116, 68

Conread position: 8-881
Cow position: chr16:3149406-3148501 (view UCSC Genome Browser custom track)
Alignm length: 921
Alignm identity: 568
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 79, 60

Conread position: 8-881
Cow position: chr16:20642124-20643023 (view UCSC Genome Browser custom track)
Alignm length: 922
Alignm identity: 565
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 24, 28

Conread position: 8-881
Cow position: chr16:43895645-43894727 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-883
Cow position: chr16:51086401-51087321 (view UCSC Genome Browser custom track)
Alignm length: 932
Alignm identity: 560
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 37

Conread position: 8-893
Cow position: chr16:3010457-3011384 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 68

Conread position: 8-893
Cow position: chr16:12536331-12535401 (view UCSC Genome Browser custom track)
Alignm length: 948
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr16:23876909-23875994 (view UCSC Genome Browser custom track)
Alignm length: 935
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr16:28168703-28167772 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr16:28194685-28193754 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr16:31587081-31586154 (view UCSC Genome Browser custom track)
Alignm length: 938
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr16:47403001-47403928 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 68

Conread position: 8-921
Cow position: chr16:5526487-5525524 (view UCSC Genome Browser custom track)
Alignm length: 973
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 60

Conread position: 8-921
Cow position: chr16:10439866-10440814 (view UCSC Genome Browser custom track)
Alignm length: 964
Alignm identity: 592
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 72, 93

Conread position: 8-925
Cow position: chr16:8814489-8813524 (view UCSC Genome Browser custom track)
Alignm length: 981
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-933
Cow position: chr16:3770394-3769423 (view UCSC Genome Browser custom track)
Alignm length: 984
Alignm identity: 604
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 79, 56

Conread position: 11-394
Cow position: chr16:21188852-21189251 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 269
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 21, 25

Conread position: 11-893
Cow position: chr16:22800052-22799158 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 57

Conread position: 15-339
Cow position: chr16:30999856-31000187 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 48

Conread position: 15-397
Cow position: chr16:23097569-23097181 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 257
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 71, 53

Conread position: 15-410
Cow position: chr16:20408541-20408151 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 266
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 109, 53

Conread position: 15-788
Cow position: chr16:5487391-5488207 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 512
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 55

Conread position: 15-933
Cow position: chr16:15186694-15187652 (view UCSC Genome Browser custom track)
Alignm length: 977
Alignm identity: 600
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 61

Conread position: 16-464
Cow position: chr16:47475641-47476111 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 298
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 70, 52

Conread position: 20-354
Cow position: chr16:42131074-42131420 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 50

Conread position: 23-407
Cow position: chr16:4388366-4388767 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 266
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 63, 47

Conread position: 23-842
Cow position: chr16:24622068-24621211 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 13

Conread position: 24-434
Cow position: chr16:30073022-30073442 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 288
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 54, 18

Conread position: 24-924
Cow position: chr16:37443886-37442956 (view UCSC Genome Browser custom track)
Alignm length: 945
Alignm identity: 566
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 46

Conread position: 32-407
Cow position: chr16:37057400-37057013 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 101, 19

Conread position: 32-574
Cow position: chr16:13559320-13558767 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 362
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 115, 23

Conread position: 39-348
Cow position: chr16:16508398-16508087 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 122

Conread position: 46-562
Cow position: chr16:53760140-53760644 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 351
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 30

Conread position: 68-473
Cow position: chr16:16268219-16267788 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 282
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 8

Conread position: 73-378
Cow position: chr16:18752657-18752368 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 157, 77

Conread position: 92-400
Cow position: chr16:5528889-5529212 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 291

Conread position: 135-646
Cow position: chr16:26092148-26091628 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 312
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 245

Conread position: 138-375
Cow position: chr16:23169905-23169670 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 19

Conread position: 151-561
Cow position: chr16:20969034-20968618 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 273
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 10

Conread position: 175-455
Cow position: chr16:2095419-2095124 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 76

Conread position: 175-475
Cow position: chr16:56861097-56861417 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 203

Conread position: 175-842
Cow position: chr16:11744328-11745035 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 439
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 203

Conread position: 179-844
Cow position: chr16:19066311-19066958 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 436
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 104

Conread position: 236-942
Cow position: chr16:9610839-9610131 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 433
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 33, 180

Conread position: 250-926
Cow position: chr16:34247981-34247308 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 434
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 41

Conread position: 255-870
Cow position: chr16:15046764-15046153 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 384
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 21

Conread position: 260-912
Cow position: chr16:18092657-18092011 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 432
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 61

Conread position: 293-567
Cow position: chr16:36652322-36652595 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 149

Conread position: 311-893
Cow position: chr16:15311213-15311827 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 396
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 60

Conread position: 311-893
Cow position: chr16:18974796-18975414 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 389
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 517

Conread position: 595-946
Cow position: chr16:30696316-30695956 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 141

Conread position: 599-867
Cow position: chr16:43647028-43647296 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 88

Conread position: 614-826
Cow position: chr16:21813394-21813606 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 36

Conread position: 618-914
Cow position: chr16:42335048-42334747 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 124, 34

Conread position: 618-945
Cow position: chr16:20720976-20721310 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 172, 239

Conread position: 618-946
Cow position: chr16:19159078-19158755 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 199, 47

Conread position: 621-884
Cow position: chr16:15549122-15549389 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 139

Conread position: 621-926
Cow position: chr16:31504199-31504503 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 71, 20

Conread position: 622-920
Cow position: chr16:43563124-43562821 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 193
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 195, 254

Conread position: 623-926
Cow position: chr16:35273129-35273436 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 102

Conread position: 626-926
Cow position: chr16:2201954-2202257 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 168

Conread position: 628-946
Cow position: chr16:4797925-4797605 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 105

Conread position: 638-931
Cow position: chr16:27525722-27525425 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 179, 37

Conread position: 686-941
Cow position: chr16:4080205-4079958 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 160, 33

Conread position: 690-923
Cow position: chr16:36086697-36086469 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 163, 122

Conread position: 692-945
Cow position: chr16:4019298-4019043 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 149, 44

Show alignments to all cow chromosomes.