Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               123, 62
               

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               297
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               2-416
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               68, 83
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 62
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-339
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               73, 62
               

               Conread position:
               8-384
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               277
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 29
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-447
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               332
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               116, 53
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-555
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-555
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               371
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-731
               

               Cow position:
               
               

               Alignm length:
               771
               

               Alignm identity:
               481
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-766
               

               Cow position:
               
               

               Alignm length:
               809
               

               Alignm identity:
               469
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               918
               

               Alignm identity:
               555
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               932
               

               Alignm identity:
               561
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 152
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               936
               

               Alignm identity:
               572
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               934
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 60
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               961
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               961
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               967
               

               Alignm identity:
               599
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               107, 59
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               970
               

               Alignm identity:
               594
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               8-925
               

               Cow position:
               
               

               Alignm length:
               972
               

               Alignm identity:
               595
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-925
               

               Cow position:
               
               

               Alignm length:
               972
               

               Alignm identity:
               594
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-936
               

               Cow position:
               
               

               Alignm length:
               974
               

               Alignm identity:
               587
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               8-945
               

               Cow position:
               
               

               Alignm length:
               980
               

               Alignm identity:
               557
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               934
               

               Alignm identity:
               577
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               113, 52
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               934
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               588
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 65
               

               Conread position:
               14-843
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               548
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               110, 62
               

               Conread position:
               15-536
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 149
               

               Conread position:
               15-555
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               359
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               15-730
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               481
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               16-381
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 60
               

               Conread position:
               16-536
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               343
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 60
               

               Conread position:
               17-459
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               294
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               20-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               363
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               104, 50
               

               Conread position:
               28-518
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               33-359
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 130
               

               Conread position:
               35-883
               

               Cow position:
               
               

               Alignm length:
               901
               

               Alignm identity:
               551
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               36-359
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               43-788
               

               Cow position:
               
               

               Alignm length:
               794
               

               Alignm identity:
               497
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               135-893
               

               Cow position:
               
               

               Alignm length:
               803
               

               Alignm identity:
               470
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 335
               

               Conread position:
               146-893
               

               Cow position:
               
               

               Alignm length:
               796
               

               Alignm identity:
               503
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               146-925
               

               Cow position:
               
               

               Alignm length:
               820
               

               Alignm identity:
               513
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               175-411
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 203
               

               Conread position:
               177-945
               

               Cow position:
               
               

               Alignm length:
               825
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 147
               

               Conread position:
               203-400
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 177
               

               Conread position:
               207-565
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 105
               

               Conread position:
               207-771
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               359
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 5
               

               Conread position:
               207-893
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               447
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               208-464
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               248-511
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               258-943
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               446
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               47, 172
               

               Conread position:
               276-815
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               360
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 265
               

               Conread position:
               293-562
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               311-926
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               412
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               82, 73
               

               Conread position:
               327-574
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               468-946
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               305
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               344, 20
               

               Conread position:
               612-941
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               622-946
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               151, 89
               

               Conread position:
               624-868
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               166, 143
               

               Conread position:
               627-946
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 97
               

               Conread position:
               628-886
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 171
               

               Conread position:
               628-946
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               162, 113
               

               Conread position:
               629-946
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 169
               

               Conread position:
               664-945
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 138
               

               Conread position:
               666-946
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               676-942
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 127
               

               Conread position:
               690-936
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               127, 102
               
Show alignments to all cow chromosomes.