Cow genome map

Conread name: Ss1.1-Pig4-TMW8053L10.5

Conread position: 1-472
Cow position:
Alignm length: 499
Alignm identity: 309
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 62

Conread position: 1-946
Cow position:
Alignm length: 983
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 68

Conread position: 2-320
Cow position:
Alignm length: 334
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 34

Conread position: 3-473
Cow position:
Alignm length: 497
Alignm identity: 326
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 60

Conread position: 3-531
Cow position:
Alignm length: 545
Alignm identity: 336
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 158

Conread position: 8-262
Cow position:
Alignm length: 269
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 28

Conread position: 8-294
Cow position:
Alignm length: 300
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 59

Conread position: 8-297
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 28

Conread position: 8-360
Cow position:
Alignm length: 364
Alignm identity: 243
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 116, 48

Conread position: 8-381
Cow position:
Alignm length: 389
Alignm identity: 253
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 60

Conread position: 8-396
Cow position:
Alignm length: 406
Alignm identity: 259
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 59

Conread position: 8-410
Cow position:
Alignm length: 419
Alignm identity: 262
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 46

Conread position: 8-410
Cow position:
Alignm length: 419
Alignm identity: 270
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 116, 68

Conread position: 8-411
Cow position:
Alignm length: 420
Alignm identity: 270
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 59

Conread position: 8-411
Cow position:
Alignm length: 420
Alignm identity: 270
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 59

Conread position: 8-430
Cow position:
Alignm length: 441
Alignm identity: 275
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 68

Conread position: 8-447
Cow position:
Alignm length: 467
Alignm identity: 305
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 28

Conread position: 8-475
Cow position:
Alignm length: 497
Alignm identity: 328
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 28

Conread position: 8-475
Cow position:
Alignm length: 492
Alignm identity: 324
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 79, 68

Conread position: 8-537
Cow position:
Alignm length: 559
Alignm identity: 366
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 28

Conread position: 8-542
Cow position:
Alignm length: 562
Alignm identity: 363
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 63

Conread position: 8-716
Cow position:
Alignm length: 754
Alignm identity: 471
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 78, 62

Conread position: 8-775
Cow position:
Alignm length: 821
Alignm identity: 514
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 78, 60

Conread position: 8-835
Cow position:
Alignm length: 879
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-842
Cow position:
Alignm length: 895
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-843
Cow position:
Alignm length: 886
Alignm identity: 545
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 68

Conread position: 8-877
Cow position:
Alignm length: 923
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 60

Conread position: 8-879
Cow position:
Alignm length: 927
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-881
Cow position:
Alignm length: 934
Alignm identity: 581
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 78, 60

Conread position: 8-881
Cow position:
Alignm length: 922
Alignm identity: 560
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 116, 68

Conread position: 8-881
Cow position:
Alignm length: 926
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-881
Cow position:
Alignm length: 939
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-881
Cow position:
Alignm length: 929
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-881
Cow position:
Alignm length: 928
Alignm identity: 579
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 78, 60

Conread position: 8-883
Cow position:
Alignm length: 931
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-885
Cow position:
Alignm length: 933
Alignm identity: 579
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 78, 60

Conread position: 8-885
Cow position:
Alignm length: 938
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position:
Alignm length: 947
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 8-893
Cow position:
Alignm length: 937
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 20

Conread position: 8-893
Cow position:
Alignm length: 939
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 937
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 60

Conread position: 8-893
Cow position:
Alignm length: 939
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-921
Cow position:
Alignm length: 957
Alignm identity: 585
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 113, 68

Conread position: 8-921
Cow position:
Alignm length: 966
Alignm identity: 589
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 113, 68

Conread position: 8-921
Cow position:
Alignm length: 968
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 68

Conread position: 8-921
Cow position:
Alignm length: 966
Alignm identity: 591
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 60

Conread position: 8-921
Cow position:
Alignm length: 970
Alignm identity: 590
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 81, 62

Conread position: 8-925
Cow position:
Alignm length: 973
Alignm identity: 596
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 113, 68

Conread position: 8-941
Cow position:
Alignm length: 960
Alignm identity: 575
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 144, 62

Conread position: 9-400
Cow position:
Alignm length: 400
Alignm identity: 274
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 77, 22

Conread position: 9-788
Cow position:
Alignm length: 834
Alignm identity: 530
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 23, 27

Conread position: 9-893
Cow position:
Alignm length: 933
Alignm identity: 571
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 5

Conread position: 9-893
Cow position:
Alignm length: 936
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 5

Conread position: 11-893
Cow position:
Alignm length: 941
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 25

Conread position: 14-881
Cow position:
Alignm length: 920
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 36

Conread position: 14-893
Cow position:
Alignm length: 934
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 56

Conread position: 14-893
Cow position:
Alignm length: 931
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 62

Conread position: 15-346
Cow position:
Alignm length: 343
Alignm identity: 226
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 55

Conread position: 15-381
Cow position:
Alignm length: 371
Alignm identity: 236
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 55

Conread position: 15-410
Cow position:
Alignm length: 413
Alignm identity: 264
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 55

Conread position: 15-466
Cow position:
Alignm length: 480
Alignm identity: 312
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 70, 38

Conread position: 15-616
Cow position:
Alignm length: 636
Alignm identity: 406
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 161

Conread position: 15-881
Cow position:
Alignm length: 920
Alignm identity: 567
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 71, 48

Conread position: 15-921
Cow position:
Alignm length: 959
Alignm identity: 593
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 109, 55

Conread position: 15-946
Cow position:
Alignm length: 967
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 48

Conread position: 16-400
Cow position:
Alignm length: 396
Alignm identity: 254
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 108, 54

Conread position: 16-415
Cow position:
Alignm length: 419
Alignm identity: 276
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 74, 44

Conread position: 20-411
Cow position:
Alignm length: 411
Alignm identity: 277
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 16

Conread position: 22-466
Cow position:
Alignm length: 472
Alignm identity: 302
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 42

Conread position: 23-410
Cow position:
Alignm length: 404
Alignm identity: 262
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 47

Conread position: 24-397
Cow position:
Alignm length: 383
Alignm identity: 251
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 64, 46

Conread position: 26-582
Cow position:
Alignm length: 585
Alignm identity: 377
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 44

Conread position: 28-783
Cow position:
Alignm length: 799
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 28

Conread position: 30-752
Cow position:
Alignm length: 745
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 31-400
Cow position:
Alignm length: 394
Alignm identity: 259
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 45

Conread position: 31-930
Cow position:
Alignm length: 961
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 32-790
Cow position:
Alignm length: 802
Alignm identity: 465
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 92, 201

Conread position: 35-400
Cow position:
Alignm length: 375
Alignm identity: 243
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 48

Conread position: 35-450
Cow position:
Alignm length: 429
Alignm identity: 284
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 49, 41

Conread position: 37-921
Cow position:
Alignm length: 936
Alignm identity: 564
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 87, 39

Conread position: 39-411
Cow position:
Alignm length: 389
Alignm identity: 247
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 37

Conread position: 39-411
Cow position:
Alignm length: 391
Alignm identity: 258
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 31

Conread position: 42-466
Cow position:
Alignm length: 445
Alignm identity: 284
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 28

Conread position: 43-291
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 20

Conread position: 88-893
Cow position:
Alignm length: 861
Alignm identity: 533
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 295

Conread position: 89-394
Cow position:
Alignm length: 322
Alignm identity: 209
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 294

Conread position: 95-384
Cow position:
Alignm length: 302
Alignm identity: 194
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 117-881
Cow position:
Alignm length: 810
Alignm identity: 491
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 372

Conread position: 117-893
Cow position:
Alignm length: 826
Alignm identity: 508
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 341

Conread position: 122-893
Cow position:
Alignm length: 816
Alignm identity: 498
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 11

Conread position: 135-411
Cow position:
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 245

Conread position: 135-849
Cow position:
Alignm length: 751
Alignm identity: 468
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 22

Conread position: 135-893
Cow position:
Alignm length: 821
Alignm identity: 505
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 18

Conread position: 136-400
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 18, 28

Conread position: 146-893
Cow position:
Alignm length: 797
Alignm identity: 497
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 7

Conread position: 160-893
Cow position:
Alignm length: 783
Alignm identity: 490
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 218

Conread position: 160-921
Cow position:
Alignm length: 806
Alignm identity: 499
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 56

Conread position: 174-541
Cow position:
Alignm length: 387
Alignm identity: 258
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 137

Conread position: 175-464
Cow position:
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 296

Conread position: 175-619
Cow position:
Alignm length: 462
Alignm identity: 295
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 19

Conread position: 175-941
Cow position:
Alignm length: 806
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 162

Conread position: 179-464
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 29, 113

Conread position: 179-786
Cow position:
Alignm length: 632
Alignm identity: 402
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 77

Conread position: 230-483
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 18

Conread position: 237-881
Cow position:
Alignm length: 694
Alignm identity: 436
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 262

Conread position: 243-444
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 16

Conread position: 250-787
Cow position:
Alignm length: 555
Alignm identity: 353
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 128

Conread position: 266-893
Cow position:
Alignm length: 671
Alignm identity: 416
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 257

Conread position: 268-946
Cow position:
Alignm length: 694
Alignm identity: 427
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 43

Conread position: 269-787
Cow position:
Alignm length: 539
Alignm identity: 326
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 103, 65

Conread position: 311-930
Cow position:
Alignm length: 659
Alignm identity: 410
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 50

Conread position: 490-893
Cow position:
Alignm length: 423
Alignm identity: 262
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 404

Conread position: 595-794
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 61

Conread position: 618-936
Cow position:
Alignm length: 328
Alignm identity: 209
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 61

Conread position: 618-941
Cow position:
Alignm length: 331
Alignm identity: 216
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 37

Conread position: 625-945
Cow position:
Alignm length: 331
Alignm identity: 210
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 254

Conread position: 626-843
Cow position:
Alignm length: 220
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 177, 104

Conread position: 627-945
Cow position:
Alignm length: 328
Alignm identity: 211
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 163, 50

Conread position: 628-790
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 27

Conread position: 645-946
Cow position:
Alignm length: 307
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 119

Conread position: 655-946
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 18

Conread position: 666-945
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 65

Conread position: 692-943
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 185

Conread position: 695-927
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 149, 40

Show alignments to all cow chromosomes.