Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-554
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               353
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 122
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               85, 44
               

               Conread position:
               2-407
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               91, 65
               

               Conread position:
               5-353
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               8-246
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               8-348
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               116, 59
               

               Conread position:
               8-359
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               126, 216
               

               Conread position:
               8-363
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               321
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               323
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               8-473
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               323
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-515
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               339
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               352
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               90, 55
               

               Conread position:
               8-789
               

               Cow position:
               
               

               Alignm length:
               794
               

               Alignm identity:
               500
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               8-842
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               935
               

               Alignm identity:
               571
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               923
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 59
               

               Conread position:
               8-885
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               571
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               596
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               978
               

               Alignm identity:
               604
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               116, 148
               

               Conread position:
               8-933
               

               Cow position:
               
               

               Alignm length:
               978
               

               Alignm identity:
               601
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               11-294
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               14-477
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               15-391
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               193, 61
               

               Conread position:
               15-926
               

               Cow position:
               
               

               Alignm length:
               962
               

               Alignm identity:
               569
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               16-461
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               17-942
               

               Cow position:
               
               

               Alignm length:
               970
               

               Alignm identity:
               594
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               69, 51
               

               Conread position:
               18-303
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 46
               

               Conread position:
               23-941
               

               Cow position:
               
               

               Alignm length:
               961
               

               Alignm identity:
               586
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               37-921
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               587
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               87, 39
               

               Conread position:
               42-893
               

               Cow position:
               
               

               Alignm length:
               902
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               56-359
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               40, 48
               

               Conread position:
               56-885
               

               Cow position:
               
               

               Alignm length:
               886
               

               Alignm identity:
               548
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               57-475
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               57-921
               

               Cow position:
               
               

               Alignm length:
               918
               

               Alignm identity:
               567
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               88-921
               

               Cow position:
               
               

               Alignm length:
               889
               

               Alignm identity:
               547
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               117-790
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               135-400
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 245
               

               Conread position:
               135-790
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               136-562
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               138-562
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               148-474
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               149-870
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               474
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               158-410
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               160-475
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 218
               

               Conread position:
               207-620
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 335
               

               Conread position:
               213-893
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               452
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 317
               

               Conread position:
               225-465
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 80
               

               Conread position:
               230-945
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               457
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               278-893
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               410
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 244
               

               Conread position:
               311-881
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 226
               

               Conread position:
               327-893
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               379
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 501
               

               Conread position:
               595-929
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 106
               

               Conread position:
               619-827
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 182
               

               Conread position:
               620-934
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               161, 32
               

               Conread position:
               621-946
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               208, 113
               

               Conread position:
               621-946
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               621-946
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               196, 97
               

               Conread position:
               622-937
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 55
               

               Conread position:
               623-945
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               626-926
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 56
               

               Conread position:
               626-945
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               214, 34
               

               Conread position:
               626-945
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               104, 22
               
Show alignments to all cow chromosomes.