Cow genome map

Conread name: Ss1.1-Pig4-TMW8053L10.5

Conread position: 1-560
Cow position: chr22:12942284-12941722 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 365
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 84, 62

Conread position: 1-946
Cow position: chr22:23941887-23940947 (view UCSC Genome Browser custom track)
Alignm length: 976
Alignm identity: 590
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 150, 7

Conread position: 2-391
Cow position: chr22:14156862-14156468 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 5

Conread position: 2-945
Cow position: chr22:36356373-36357346 (view UCSC Genome Browser custom track)
Alignm length: 986
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 44

Conread position: 7-359
Cow position: chr22:32205373-32205729 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 69

Conread position: 7-881
Cow position: chr22:558396-557479 (view UCSC Genome Browser custom track)
Alignm length: 927
Alignm identity: 571
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 69

Conread position: 7-883
Cow position: chr22:21591733-21592650 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 63

Conread position: 8-243
Cow position: chr22:44398741-44398985 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 62

Conread position: 8-297
Cow position: chr22:8132476-8132182 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 28

Conread position: 8-354
Cow position: chr22:6334122-6334475 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 227
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 68

Conread position: 8-359
Cow position: chr22:15277684-15278045 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 28

Conread position: 8-384
Cow position: chr22:18029581-18029967 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 256
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 79, 62

Conread position: 8-447
Cow position: chr22:37537167-37536710 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 294
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 63

Conread position: 8-475
Cow position: chr22:11802743-11802253 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 321
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 28

Conread position: 8-552
Cow position: chr22:46579411-46578862 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 350
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 38

Conread position: 8-753
Cow position: chr22:20238526-20237741 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-769
Cow position: chr22:44101029-44100232 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 501
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 125, 70

Conread position: 8-842
Cow position: chr22:980596-981474 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 49

Conread position: 8-892
Cow position: chr22:43235153-43236071 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 68

Conread position: 8-893
Cow position: chr22:539440-540369 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 68

Conread position: 8-893
Cow position: chr22:10578181-10577253 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr22:42993482-42994409 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 55

Conread position: 8-893
Cow position: chr22:45280250-45281184 (view UCSC Genome Browser custom track)
Alignm length: 946
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 9-410
Cow position: chr22:132340-131956 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 262
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 124, 54

Conread position: 11-413
Cow position: chr22:28998223-28997806 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 274
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 25

Conread position: 11-893
Cow position: chr22:10907889-10906970 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 71

Conread position: 11-893
Cow position: chr22:27307655-27306728 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 25

Conread position: 14-881
Cow position: chr22:696239-697156 (view UCSC Genome Browser custom track)
Alignm length: 920
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 54

Conread position: 14-893
Cow position: chr22:3276037-3275122 (view UCSC Genome Browser custom track)
Alignm length: 931
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 54

Conread position: 15-272
Cow position: chr22:13662771-13663033 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 62

Conread position: 15-410
Cow position: chr22:41242746-41243149 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 264
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 48

Conread position: 15-881
Cow position: chr22:28784431-28785343 (view UCSC Genome Browser custom track)
Alignm length: 922
Alignm identity: 572
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 53

Conread position: 15-885
Cow position: chr22:35669352-35668435 (view UCSC Genome Browser custom track)
Alignm length: 931
Alignm identity: 573
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 66, 149

Conread position: 15-929
Cow position: chr22:3759493-3758568 (view UCSC Genome Browser custom track)
Alignm length: 964
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 61

Conread position: 17-893
Cow position: chr22:29854174-29855084 (view UCSC Genome Browser custom track)
Alignm length: 927
Alignm identity: 574
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 19

Conread position: 22-773
Cow position: chr22:37997924-37997151 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 497
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 48

Conread position: 24-881
Cow position: chr22:41847225-41846341 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 545
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 108, 39

Conread position: 32-359
Cow position: chr22:31581812-31581490 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 45

Conread position: 70-881
Cow position: chr22:19601434-19600578 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 526
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 17, 88

Conread position: 117-925
Cow position: chr22:41169323-41170161 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 23

Conread position: 135-885
Cow position: chr22:10601307-10602085 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 476
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 407

Conread position: 135-946
Cow position: chr22:8647339-8646493 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 150-555
Cow position: chr22:8768223-8768635 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 279
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 110

Conread position: 158-843
Cow position: chr22:12729189-12728477 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 430
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 93

Conread position: 160-475
Cow position: chr22:18196739-18197074 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 218

Conread position: 160-788
Cow position: chr22:8487412-8486747 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 413
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 218

Conread position: 168-407
Cow position: chr22:17812156-17811907 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 210

Conread position: 207-555
Cow position: chr22:22934285-22934639 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 277

Conread position: 276-790
Cow position: chr22:31110015-31110545 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 340
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 106

Conread position: 311-921
Cow position: chr22:39465922-39465277 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 395
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 219

Conread position: 621-924
Cow position: chr22:36852875-36852569 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 169, 107

Conread position: 621-941
Cow position: chr22:8258953-8258638 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 200
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 309, 122

Conread position: 622-941
Cow position: chr22:40775135-40775451 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 207
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 207, 66

Conread position: 623-945
Cow position: chr22:13588072-13587747 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 17

Conread position: 626-793
Cow position: chr22:29210044-29209881 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 76

Show alignments to all cow chromosomes.