Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053L10.5 |
| Conread position: | 2-395 |
| Cow position: | chr26:35058470-35058854 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 206, 62 |
| Conread position: | 8-410 |
| Cow position: | chr26:17430160-17429742 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-410 |
| Cow position: | chr26:32933171-32932755 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 68 |
| Conread position: | 8-421 |
| Cow position: | chr26:21824305-21823883 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-464 |
| Cow position: | chr26:6425341-6425823 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-475 |
| Cow position: | chr26:2418053-2417560 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-555 |
| Cow position: | chr26:35561550-35562114 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 374 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-620 |
| Cow position: | chr26:30785116-30785763 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 406 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-754 |
| Cow position: | chr26:3028284-3027486 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 498 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-769 |
| Cow position: | chr26:19349148-19348353 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 495 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-788 |
| Cow position: | chr26:18035260-18036069 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 507 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 8-843 |
| Cow position: | chr26:30587003-30586122 (view UCSC Genome Browser custom track) |
| Alignm length: | 891 |
| Alignm identity: | 552 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-879 |
| Cow position: | chr26:35122900-35121981 (view UCSC Genome Browser custom track) |
| Alignm length: | 930 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-881 |
| Cow position: | chr26:12586185-12585275 (view UCSC Genome Browser custom track) |
| Alignm length: | 927 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-893 |
| Cow position: | chr26:2349828-2348897 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-893 |
| Cow position: | chr26:18856468-18857394 (view UCSC Genome Browser custom track) |
| Alignm length: | 943 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chr26:23888758-23889686 (view UCSC Genome Browser custom track) |
| Alignm length: | 946 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-893 |
| Cow position: | chr26:28707716-28706784 (view UCSC Genome Browser custom track) |
| Alignm length: | 942 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-935 |
| Cow position: | chr26:17394539-17393577 (view UCSC Genome Browser custom track) |
| Alignm length: | 977 |
| Alignm identity: | 592 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 61, 76 |
| Conread position: | 9-360 |
| Cow position: | chr26:8611792-8611447 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 132, 61 |
| Conread position: | 9-541 |
| Cow position: | chr26:21416528-21415989 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 372 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 14-352 |
| Cow position: | chr26:17995020-17994684 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 15-475 |
| Cow position: | chr26:26306901-26306438 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 16-893 |
| Cow position: | chr26:8872195-8873120 (view UCSC Genome Browser custom track) |
| Alignm length: | 930 |
| Alignm identity: | 544 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 24-476 |
| Cow position: | chr26:28720691-28721153 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 26-412 |
| Cow position: | chr26:19012300-19012698 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 64, 44 |
| Conread position: | 35-770 |
| Cow position: | chr26:6845144-6844364 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 500 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 56-537 |
| Cow position: | chr26:4440812-4441309 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 329 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 60-788 |
| Cow position: | chr26:4122062-4122833 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 480 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 130-400 |
| Cow position: | chr26:26293128-26293404 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 135-473 |
| Cow position: | chr26:4601712-4601357 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 205-555 |
| Cow position: | chr26:8647642-8647979 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 260-945 |
| Cow position: | chr26:33911428-33910743 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 441 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 301-635 |
| Cow position: | chr26:10769146-10769505 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 158 |
| Conread position: | 318-771 |
| Cow position: | chr26:16722321-16722798 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 345-945 |
| Cow position: | chr26:8191186-8190549 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 392 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 197 |
| Conread position: | 621-881 |
| Cow position: | chr26:21415568-21415301 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 109, 61 |
| Conread position: | 622-787 |
| Cow position: | chr26:15891979-15892144 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 691-885 |
| Cow position: | chr26:14205755-14205941 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 153, 15 |
Show alignments to all cow chromosomes.