Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053L10.5 |
| Conread position: | 2-359 |
| Cow position: | chr27:30571118-30571483 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 66 |
| Conread position: | 2-416 |
| Cow position: | chr27:12263130-12262724 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 5-881 |
| Cow position: | chr27:24296948-24296051 (view UCSC Genome Browser custom track) |
| Alignm length: | 918 |
| Alignm identity: | 538 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 5, 66 |
| Conread position: | 8-359 |
| Cow position: | chr27:1847075-1846717 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 8-410 |
| Cow position: | chr27:9990907-9990493 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 8-416 |
| Cow position: | chr27:797307-796888 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-464 |
| Cow position: | chr27:15034796-15034313 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 78, 157 |
| Conread position: | 8-841 |
| Cow position: | chr27:4981677-4982548 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 537 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-893 |
| Cow position: | chr27:16032090-16031168 (view UCSC Genome Browser custom track) |
| Alignm length: | 938 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 8-921 |
| Cow position: | chr27:166613-165661 (view UCSC Genome Browser custom track) |
| Alignm length: | 968 |
| Alignm identity: | 585 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 8-921 |
| Cow position: | chr27:3233221-3232276 (view UCSC Genome Browser custom track) |
| Alignm length: | 968 |
| Alignm identity: | 610 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-921 |
| Cow position: | chr27:12749333-12750283 (view UCSC Genome Browser custom track) |
| Alignm length: | 969 |
| Alignm identity: | 592 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-929 |
| Cow position: | chr27:19524415-19523442 (view UCSC Genome Browser custom track) |
| Alignm length: | 982 |
| Alignm identity: | 602 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 72, 156 |
| Conread position: | 15-464 |
| Cow position: | chr27:26327369-26327840 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 306 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 20-397 |
| Cow position: | chr27:16965235-16964863 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 23-872 |
| Cow position: | chr27:23905125-23906014 (view UCSC Genome Browser custom track) |
| Alignm length: | 904 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 107 |
| Conread position: | 42-946 |
| Cow position: | chr27:24114479-24115405 (view UCSC Genome Browser custom track) |
| Alignm length: | 955 |
| Alignm identity: | 586 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 62-828 |
| Cow position: | chr27:12147292-12146484 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 518 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 64-475 |
| Cow position: | chr27:22734129-22733713 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 314 |
| Conread position: | 88-426 |
| Cow position: | chr27:19690972-19690626 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 135-475 |
| Cow position: | chr27:1031270-1031632 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 146-411 |
| Cow position: | chr27:17404419-17404146 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 149-365 |
| Cow position: | chr27:22036921-22037142 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 160-411 |
| Cow position: | chr27:1082444-1082704 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 231-766 |
| Cow position: | chr27:29036841-29036271 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 355 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 144 |
| Conread position: | 235-925 |
| Cow position: | chr27:26621710-26620994 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 465 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 621-942 |
| Cow position: | chr27:31547595-31547258 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 628-787 |
| Cow position: | chr27:7667743-7667902 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 677-926 |
| Cow position: | chr27:15258311-15258566 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 153, 138 |
Show alignments to all cow chromosomes.