Cow genome map
Conread name: | Ss1.1-Pig4-TMW8053L10.5 |
Conread position: | 1-376 |
Cow position: | chr28:8907026-8906638 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 254 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 86, 41 |
Conread position: | 2-297 |
Cow position: | chr28:5338356-5338052 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 205 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 84, 61 |
Conread position: | 2-396 |
Cow position: | chr28:17188732-17189126 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 265 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 122, 42 |
Conread position: | 3-943 |
Cow position: | chr28:17250206-17249259 (view UCSC Genome Browser custom track) |
Alignm length: | 983 |
Alignm identity: | 618 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 117 |
Conread position: | 5-407 |
Cow position: | chr28:10471996-10472408 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 266 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 81, 63 |
Conread position: | 5-843 |
Cow position: | chr28:33638909-33639794 (view UCSC Genome Browser custom track) |
Alignm length: | 893 |
Alignm identity: | 553 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 7, 66 |
Conread position: | 8-384 |
Cow position: | chr28:21378882-21379269 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 248 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 43, 63 |
Conread position: | 8-410 |
Cow position: | chr28:8381392-8381808 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 269 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 79, 62 |
Conread position: | 8-411 |
Cow position: | chr28:25849287-25848868 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 286 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 24, 28 |
Conread position: | 8-475 |
Cow position: | chr28:25167807-25167325 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 315 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 82, 60 |
Conread position: | 8-782 |
Cow position: | chr28:30534718-30533900 (view UCSC Genome Browser custom track) |
Alignm length: | 831 |
Alignm identity: | 514 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 78, 60 |
Conread position: | 8-788 |
Cow position: | chr28:24591217-24592038 (view UCSC Genome Browser custom track) |
Alignm length: | 827 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 55 |
Conread position: | 8-849 |
Cow position: | chr28:15352745-15351893 (view UCSC Genome Browser custom track) |
Alignm length: | 884 |
Alignm identity: | 536 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 125, 95 |
Conread position: | 8-881 |
Cow position: | chr28:785013-785931 (view UCSC Genome Browser custom track) |
Alignm length: | 933 |
Alignm identity: | 581 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 78, 60 |
Conread position: | 8-881 |
Cow position: | chr28:5112372-5111457 (view UCSC Genome Browser custom track) |
Alignm length: | 925 |
Alignm identity: | 573 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 68 |
Conread position: | 8-881 |
Cow position: | chr28:7335336-7336247 (view UCSC Genome Browser custom track) |
Alignm length: | 917 |
Alignm identity: | 539 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 62 |
Conread position: | 8-881 |
Cow position: | chr28:29037301-29036388 (view UCSC Genome Browser custom track) |
Alignm length: | 926 |
Alignm identity: | 570 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 78, 60 |
Conread position: | 8-881 |
Cow position: | chr28:30097221-30098140 (view UCSC Genome Browser custom track) |
Alignm length: | 928 |
Alignm identity: | 575 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 60 |
Conread position: | 8-882 |
Cow position: | chr28:33254666-33255586 (view UCSC Genome Browser custom track) |
Alignm length: | 936 |
Alignm identity: | 579 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 79, 62 |
Conread position: | 8-893 |
Cow position: | chr28:2644062-2644990 (view UCSC Genome Browser custom track) |
Alignm length: | 941 |
Alignm identity: | 595 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 28 |
Conread position: | 8-893 |
Cow position: | chr28:6536449-6535523 (view UCSC Genome Browser custom track) |
Alignm length: | 934 |
Alignm identity: | 574 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 24 |
Conread position: | 8-893 |
Cow position: | chr28:10302189-10303113 (view UCSC Genome Browser custom track) |
Alignm length: | 938 |
Alignm identity: | 575 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 113, 55 |
Conread position: | 8-893 |
Cow position: | chr28:24885204-24886135 (view UCSC Genome Browser custom track) |
Alignm length: | 946 |
Alignm identity: | 602 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 60 |
Conread position: | 8-893 |
Cow position: | chr28:28470366-28471300 (view UCSC Genome Browser custom track) |
Alignm length: | 946 |
Alignm identity: | 585 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 82, 62 |
Conread position: | 8-893 |
Cow position: | chr28:28928179-28929108 (view UCSC Genome Browser custom track) |
Alignm length: | 944 |
Alignm identity: | 590 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 28 |
Conread position: | 8-893 |
Cow position: | chr28:34582267-34583199 (view UCSC Genome Browser custom track) |
Alignm length: | 940 |
Alignm identity: | 595 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 28 |
Conread position: | 8-894 |
Cow position: | chr28:6777660-6776726 (view UCSC Genome Browser custom track) |
Alignm length: | 942 |
Alignm identity: | 575 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 79, 49 |
Conread position: | 8-896 |
Cow position: | chr28:1955715-1956647 (view UCSC Genome Browser custom track) |
Alignm length: | 947 |
Alignm identity: | 594 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 62 |
Conread position: | 8-899 |
Cow position: | chr28:1507215-1508157 (view UCSC Genome Browser custom track) |
Alignm length: | 950 |
Alignm identity: | 587 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 60 |
Conread position: | 8-921 |
Cow position: | chr28:15918177-15917223 (view UCSC Genome Browser custom track) |
Alignm length: | 963 |
Alignm identity: | 592 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 62 |
Conread position: | 8-921 |
Cow position: | chr28:34596590-34597548 (view UCSC Genome Browser custom track) |
Alignm length: | 967 |
Alignm identity: | 591 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 74, 149 |
Conread position: | 15-346 |
Cow position: | chr28:20266162-20265823 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 232 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 70, 8 |
Conread position: | 15-464 |
Cow position: | chr28:7743495-7743967 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 308 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 109, 61 |
Conread position: | 15-464 |
Cow position: | chr28:17390765-17391240 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 317 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 71, 53 |
Conread position: | 15-783 |
Cow position: | chr28:1165533-1164729 (view UCSC Genome Browser custom track) |
Alignm length: | 814 |
Alignm identity: | 506 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 72, 55 |
Conread position: | 15-881 |
Cow position: | chr28:1215477-1214566 (view UCSC Genome Browser custom track) |
Alignm length: | 919 |
Alignm identity: | 570 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 61 |
Conread position: | 15-881 |
Cow position: | chr28:5939843-5940750 (view UCSC Genome Browser custom track) |
Alignm length: | 916 |
Alignm identity: | 560 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 109, 61 |
Conread position: | 15-929 |
Cow position: | chr28:5749348-5748393 (view UCSC Genome Browser custom track) |
Alignm length: | 975 |
Alignm identity: | 616 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 17 |
Conread position: | 15-941 |
Cow position: | chr28:28441113-28442058 (view UCSC Genome Browser custom track) |
Alignm length: | 971 |
Alignm identity: | 611 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 17 |
Conread position: | 16-291 |
Cow position: | chr28:29760271-29759989 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 186 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 28, 55 |
Conread position: | 27-770 |
Cow position: | chr28:18105474-18104721 (view UCSC Genome Browser custom track) |
Alignm length: | 780 |
Alignm identity: | 477 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 101, 43 |
Conread position: | 35-893 |
Cow position: | chr28:483337-482433 (view UCSC Genome Browser custom track) |
Alignm length: | 915 |
Alignm identity: | 568 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 46, 140 |
Conread position: | 62-361 |
Cow position: | chr28:34314693-34315004 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 218 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 24, 14 |
Conread position: | 88-475 |
Cow position: | chr28:14110495-14110907 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 272 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 36, 295 |
Conread position: | 131-352 |
Cow position: | chr28:19185310-19185090 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 149 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 170, 30 |
Conread position: | 143-893 |
Cow position: | chr28:6477705-6478494 (view UCSC Genome Browser custom track) |
Alignm length: | 799 |
Alignm identity: | 499 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 65, 58 |
Conread position: | 149-732 |
Cow position: | chr28:22387453-22386859 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 375 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 59, 13 |
Conread position: | 175-475 |
Cow position: | chr28:14891469-14891789 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 215 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 33, 201 |
Conread position: | 280-893 |
Cow position: | chr28:5636678-5637325 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 405 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 22, 243 |
Conread position: | 324-541 |
Cow position: | chr28:16657979-16658201 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 156 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 12, 59 |
Conread position: | 404-946 |
Cow position: | chr28:22791278-22791801 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 351 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 45, 79 |
Conread position: | 420-790 |
Cow position: | chr28:7215130-7214752 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 253 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 61 |
Conread position: | 560-921 |
Cow position: | chr28:6046720-6047100 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 247 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 14, 250 |
Conread position: | 578-921 |
Cow position: | chr28:31222076-31222428 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 68 |
Conread position: | 592-945 |
Cow position: | chr28:15004225-15004592 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 246 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 30, 92 |
Conread position: | 621-868 |
Cow position: | chr28:26563184-26563436 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 170 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 161, 62 |
Conread position: | 628-935 |
Cow position: | chr28:30239135-30238854 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 209 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 643-844 |
Cow position: | chr28:25773012-25773216 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 146 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 137, 86 |
Conread position: | 667-945 |
Cow position: | chr28:23916123-23916406 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 188 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 162, 74 |
Conread position: | 680-922 |
Cow position: | chr28:20373441-20373684 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 160 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 170, 132 |
Show alignments to all cow chromosomes.