Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               86, 41
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               2-396
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 42
               

               Conread position:
               3-943
               

               Cow position:
               
               

               Alignm length:
               983
               

               Alignm identity:
               618
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 117
               

               Conread position:
               5-407
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               5-843
               

               Cow position:
               
               

               Alignm length:
               893
               

               Alignm identity:
               553
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               8-384
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               8-782
               

               Cow position:
               
               

               Alignm length:
               831
               

               Alignm identity:
               514
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-788
               

               Cow position:
               
               

               Alignm length:
               827
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 55
               

               Conread position:
               8-849
               

               Cow position:
               
               

               Alignm length:
               884
               

               Alignm identity:
               536
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               125, 95
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               933
               

               Alignm identity:
               581
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               925
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               917
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               570
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               928
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-882
               

               Cow position:
               
               

               Alignm length:
               936
               

               Alignm identity:
               579
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               934
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               938
               

               Alignm identity:
               575
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               113, 55
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               946
               

               Alignm identity:
               602
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               946
               

               Alignm identity:
               585
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               82, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               944
               

               Alignm identity:
               590
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-894
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               575
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               8-896
               

               Cow position:
               
               

               Alignm length:
               947
               

               Alignm identity:
               594
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-899
               

               Cow position:
               
               

               Alignm length:
               950
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               963
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               967
               

               Alignm identity:
               591
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               15-346
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               15-464
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               15-464
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               15-783
               

               Cow position:
               
               

               Alignm length:
               814
               

               Alignm identity:
               506
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               15-881
               

               Cow position:
               
               

               Alignm length:
               919
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               15-881
               

               Cow position:
               
               

               Alignm length:
               916
               

               Alignm identity:
               560
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               15-929
               

               Cow position:
               
               

               Alignm length:
               975
               

               Alignm identity:
               616
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               15-941
               

               Cow position:
               
               

               Alignm length:
               971
               

               Alignm identity:
               611
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               16-291
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               27-770
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               477
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               101, 43
               

               Conread position:
               35-893
               

               Cow position:
               
               

               Alignm length:
               915
               

               Alignm identity:
               568
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               62-361
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               88-475
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               36, 295
               

               Conread position:
               131-352
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               170, 30
               

               Conread position:
               143-893
               

               Cow position:
               
               

               Alignm length:
               799
               

               Alignm identity:
               499
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               149-732
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               175-475
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 201
               

               Conread position:
               280-893
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               405
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 243
               

               Conread position:
               324-541
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               404-946
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               351
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               420-790
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               560-921
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 250
               

               Conread position:
               578-921
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               592-945
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               30, 92
               

               Conread position:
               621-868
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               161, 62
               

               Conread position:
               628-935
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               643-844
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               137, 86
               

               Conread position:
               667-945
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               162, 74
               

               Conread position:
               680-922
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               170, 132
               
Show alignments to all cow chromosomes.