Cow genome map

Conread name: Ss1.1-Pig4-TMW8053L10.5

Conread position: 1-376
Cow position: chr28:8907026-8906638 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 254
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 86, 41

Conread position: 2-297
Cow position: chr28:5338356-5338052 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 61

Conread position: 2-396
Cow position: chr28:17188732-17189126 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 265
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 42

Conread position: 3-943
Cow position: chr28:17250206-17249259 (view UCSC Genome Browser custom track)
Alignm length: 983
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 117

Conread position: 5-407
Cow position: chr28:10471996-10472408 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 266
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 81, 63

Conread position: 5-843
Cow position: chr28:33638909-33639794 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 553
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 7, 66

Conread position: 8-384
Cow position: chr28:21378882-21379269 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 248
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 63

Conread position: 8-410
Cow position: chr28:8381392-8381808 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 269
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 62

Conread position: 8-411
Cow position: chr28:25849287-25848868 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 286
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 28

Conread position: 8-475
Cow position: chr28:25167807-25167325 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 315
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 60

Conread position: 8-782
Cow position: chr28:30534718-30533900 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 514
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 60

Conread position: 8-788
Cow position: chr28:24591217-24592038 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 8-849
Cow position: chr28:15352745-15351893 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 536
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 95

Conread position: 8-881
Cow position: chr28:785013-785931 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 581
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 60

Conread position: 8-881
Cow position: chr28:5112372-5111457 (view UCSC Genome Browser custom track)
Alignm length: 925
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 68

Conread position: 8-881
Cow position: chr28:7335336-7336247 (view UCSC Genome Browser custom track)
Alignm length: 917
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-881
Cow position: chr28:29037301-29036388 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 570
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 78, 60

Conread position: 8-881
Cow position: chr28:30097221-30098140 (view UCSC Genome Browser custom track)
Alignm length: 928
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-882
Cow position: chr28:33254666-33255586 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 579
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 62

Conread position: 8-893
Cow position: chr28:2644062-2644990 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr28:6536449-6535523 (view UCSC Genome Browser custom track)
Alignm length: 934
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 24

Conread position: 8-893
Cow position: chr28:10302189-10303113 (view UCSC Genome Browser custom track)
Alignm length: 938
Alignm identity: 575
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 113, 55

Conread position: 8-893
Cow position: chr28:24885204-24886135 (view UCSC Genome Browser custom track)
Alignm length: 946
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr28:28470366-28471300 (view UCSC Genome Browser custom track)
Alignm length: 946
Alignm identity: 585
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 82, 62

Conread position: 8-893
Cow position: chr28:28928179-28929108 (view UCSC Genome Browser custom track)
Alignm length: 944
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr28:34582267-34583199 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-894
Cow position: chr28:6777660-6776726 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 575
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 79, 49

Conread position: 8-896
Cow position: chr28:1955715-1956647 (view UCSC Genome Browser custom track)
Alignm length: 947
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-899
Cow position: chr28:1507215-1508157 (view UCSC Genome Browser custom track)
Alignm length: 950
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-921
Cow position: chr28:15918177-15917223 (view UCSC Genome Browser custom track)
Alignm length: 963
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 62

Conread position: 8-921
Cow position: chr28:34596590-34597548 (view UCSC Genome Browser custom track)
Alignm length: 967
Alignm identity: 591
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 74, 149

Conread position: 15-346
Cow position: chr28:20266162-20265823 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 70, 8

Conread position: 15-464
Cow position: chr28:7743495-7743967 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 308
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 109, 61

Conread position: 15-464
Cow position: chr28:17390765-17391240 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 317
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 71, 53

Conread position: 15-783
Cow position: chr28:1165533-1164729 (view UCSC Genome Browser custom track)
Alignm length: 814
Alignm identity: 506
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 55

Conread position: 15-881
Cow position: chr28:1215477-1214566 (view UCSC Genome Browser custom track)
Alignm length: 919
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 61

Conread position: 15-881
Cow position: chr28:5939843-5940750 (view UCSC Genome Browser custom track)
Alignm length: 916
Alignm identity: 560
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 109, 61

Conread position: 15-929
Cow position: chr28:5749348-5748393 (view UCSC Genome Browser custom track)
Alignm length: 975
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 17

Conread position: 15-941
Cow position: chr28:28441113-28442058 (view UCSC Genome Browser custom track)
Alignm length: 971
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 17

Conread position: 16-291
Cow position: chr28:29760271-29759989 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 55

Conread position: 27-770
Cow position: chr28:18105474-18104721 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 477
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 101, 43

Conread position: 35-893
Cow position: chr28:483337-482433 (view UCSC Genome Browser custom track)
Alignm length: 915
Alignm identity: 568
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 46, 140

Conread position: 62-361
Cow position: chr28:34314693-34315004 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 14

Conread position: 88-475
Cow position: chr28:14110495-14110907 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 295

Conread position: 131-352
Cow position: chr28:19185310-19185090 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 170, 30

Conread position: 143-893
Cow position: chr28:6477705-6478494 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 499
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 58

Conread position: 149-732
Cow position: chr28:22387453-22386859 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 375
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 13

Conread position: 175-475
Cow position: chr28:14891469-14891789 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 201

Conread position: 280-893
Cow position: chr28:5636678-5637325 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 405
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 243

Conread position: 324-541
Cow position: chr28:16657979-16658201 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 59

Conread position: 404-946
Cow position: chr28:22791278-22791801 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 351
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 79

Conread position: 420-790
Cow position: chr28:7215130-7214752 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 253
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 61

Conread position: 560-921
Cow position: chr28:6046720-6047100 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 247
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 250

Conread position: 578-921
Cow position: chr28:31222076-31222428 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 68

Conread position: 592-945
Cow position: chr28:15004225-15004592 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 30, 92

Conread position: 621-868
Cow position: chr28:26563184-26563436 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 161, 62

Conread position: 628-935
Cow position: chr28:30239135-30238854 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 643-844
Cow position: chr28:25773012-25773216 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 137, 86

Conread position: 667-945
Cow position: chr28:23916123-23916406 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 162, 74

Conread position: 680-922
Cow position: chr28:20373441-20373684 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 170, 132

Show alignments to all cow chromosomes.