Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               123, 67
               

               Conread position:
               1-466
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               133, 225
               

               Conread position:
               1-788
               

               Cow position:
               
               

               Alignm length:
               830
               

               Alignm identity:
               504
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               3-881
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               580
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 29
               

               Conread position:
               5-783
               

               Cow position:
               
               

               Alignm length:
               828
               

               Alignm identity:
               513
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               5-881
               

               Cow position:
               
               

               Alignm length:
               927
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 72
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               109, 55
               

               Conread position:
               8-330
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-359
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-384
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 71
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-473
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               326
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               313
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               8-743
               

               Cow position:
               
               

               Alignm length:
               788
               

               Alignm identity:
               493
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-843
               

               Cow position:
               
               

               Alignm length:
               890
               

               Alignm identity:
               550
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-843
               

               Cow position:
               
               

               Alignm length:
               890
               

               Alignm identity:
               552
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-843
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               542
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               927
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 68
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               929
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 534
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               595
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-883
               

               Cow position:
               
               

               Alignm length:
               928
               

               Alignm identity:
               576
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-883
               

               Cow position:
               
               

               Alignm length:
               928
               

               Alignm identity:
               585
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               576
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               588
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               572
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               944
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-920
               

               Cow position:
               
               

               Alignm length:
               963
               

               Alignm identity:
               585
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               972
               

               Alignm identity:
               593
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-935
               

               Cow position:
               
               

               Alignm length:
               992
               

               Alignm identity:
               619
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               11-662
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               446
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               76, 59
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               577
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               14-273
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               15-396
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               201, 55
               

               Conread position:
               15-410
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               15-476
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               69, 61
               

               Conread position:
               15-828
               

               Cow position:
               
               

               Alignm length:
               838
               

               Alignm identity:
               514
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               15-881
               

               Cow position:
               
               

               Alignm length:
               917
               

               Alignm identity:
               548
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               20-946
               

               Cow position:
               
               

               Alignm length:
               969
               

               Alignm identity:
               599
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               120, 50
               

               Conread position:
               22-843
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               548
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               10, 14
               

               Conread position:
               31-785
               

               Cow position:
               
               

               Alignm length:
               776
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               33-519
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               35-893
               

               Cow position:
               
               

               Alignm length:
               919
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 343
               

               Conread position:
               36-464
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               52, 34
               

               Conread position:
               37-464
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               80-381
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               100-893
               

               Cow position:
               
               

               Alignm length:
               848
               

               Alignm identity:
               527
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               24, 434
               

               Conread position:
               135-881
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               513
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               138-429
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               144-769
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               402
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               171-945
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               498
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               207, 70
               

               Conread position:
               178-843
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               438
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               206-384
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 26
               

               Conread position:
               206-742
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               360
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               240-946
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               468
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 124
               

               Conread position:
               245-843
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               409
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               258-788
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               352
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               56, 112
               

               Conread position:
               311-946
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               407
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               393-923
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               352
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 87
               

               Conread position:
               400-946
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               610-943
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               171, 41
               

               Conread position:
               612-945
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               618-911
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               112, 189
               

               Conread position:
               626-946
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               191, 15
               

               Conread position:
               635-942
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               661-893
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               168, 27
               
Show alignments to all cow chromosomes.