Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053L10.5 |
| Conread position: | 1-327 |
| Cow position: | chr3:21223560-21223226 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 1-562 |
| Cow position: | chr3:67628531-67627963 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 388 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 2-410 |
| Cow position: | chr3:82930859-82931281 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 2-411 |
| Cow position: | chr3:13035912-13036337 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 34 |
| Conread position: | 3-749 |
| Cow position: | chr3:67532384-67533148 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 492 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 132, 73 |
| Conread position: | 5-410 |
| Cow position: | chr3:19754730-19754314 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 7, 28 |
| Conread position: | 5-464 |
| Cow position: | chr3:49135332-49134848 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 119, 71 |
| Conread position: | 7-881 |
| Cow position: | chr3:66622446-66623361 (view UCSC Genome Browser custom track) |
| Alignm length: | 927 |
| Alignm identity: | 560 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 117, 69 |
| Conread position: | 8-294 |
| Cow position: | chr3:23205650-23205353 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-297 |
| Cow position: | chr3:30990016-30989715 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-353 |
| Cow position: | chr3:64025902-64025544 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-395 |
| Cow position: | chr3:7156482-7156084 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-400 |
| Cow position: | chr3:2708636-2708234 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 8-400 |
| Cow position: | chr3:42151551-42151151 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-400 |
| Cow position: | chr3:58887901-58887502 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 73, 138 |
| Conread position: | 8-411 |
| Cow position: | chr3:3525274-3525675 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-473 |
| Cow position: | chr3:24443866-24443373 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-475 |
| Cow position: | chr3:18113458-18112966 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-475 |
| Cow position: | chr3:29329054-29328561 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-475 |
| Cow position: | chr3:34505118-34504626 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 333 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-783 |
| Cow position: | chr3:27920678-27921497 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 512 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-788 |
| Cow position: | chr3:41082402-41083214 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 516 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-829 |
| Cow position: | chr3:48602484-48603343 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 535 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 116, 34 |
| Conread position: | 8-830 |
| Cow position: | chr3:30616708-30615847 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 8-842 |
| Cow position: | chr3:41208367-41207489 (view UCSC Genome Browser custom track) |
| Alignm length: | 887 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-867 |
| Cow position: | chr3:69931605-69930698 (view UCSC Genome Browser custom track) |
| Alignm length: | 915 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-881 |
| Cow position: | chr3:7246876-7245955 (view UCSC Genome Browser custom track) |
| Alignm length: | 927 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 8-881 |
| Cow position: | chr3:30320492-30321407 (view UCSC Genome Browser custom track) |
| Alignm length: | 932 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 62 |
| Conread position: | 8-881 |
| Cow position: | chr3:32620813-32619893 (view UCSC Genome Browser custom track) |
| Alignm length: | 936 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-881 |
| Cow position: | chr3:40337911-40336997 (view UCSC Genome Browser custom track) |
| Alignm length: | 925 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-881 |
| Cow position: | chr3:40825627-40826547 (view UCSC Genome Browser custom track) |
| Alignm length: | 931 |
| Alignm identity: | 570 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 8-881 |
| Cow position: | chr3:72632301-72633222 (view UCSC Genome Browser custom track) |
| Alignm length: | 931 |
| Alignm identity: | 574 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 8-882 |
| Cow position: | chr3:31121914-31120987 (view UCSC Genome Browser custom track) |
| Alignm length: | 936 |
| Alignm identity: | 576 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-883 |
| Cow position: | chr3:18861671-18862592 (view UCSC Genome Browser custom track) |
| Alignm length: | 931 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-885 |
| Cow position: | chr3:38868813-38869721 (view UCSC Genome Browser custom track) |
| Alignm length: | 927 |
| Alignm identity: | 563 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 116, 34 |
| Conread position: | 8-893 |
| Cow position: | chr3:15415698-15416626 (view UCSC Genome Browser custom track) |
| Alignm length: | 946 |
| Alignm identity: | 602 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chr3:16225119-16226035 (view UCSC Genome Browser custom track) |
| Alignm length: | 937 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 8-893 |
| Cow position: | chr3:19798924-19797992 (view UCSC Genome Browser custom track) |
| Alignm length: | 943 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chr3:20380495-20379557 (view UCSC Genome Browser custom track) |
| Alignm length: | 958 |
| Alignm identity: | 606 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 8-893 |
| Cow position: | chr3:26743643-26742713 (view UCSC Genome Browser custom track) |
| Alignm length: | 947 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-893 |
| Cow position: | chr3:31020911-31021842 (view UCSC Genome Browser custom track) |
| Alignm length: | 942 |
| Alignm identity: | 585 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 74, 527 |
| Conread position: | 8-893 |
| Cow position: | chr3:37971283-37972194 (view UCSC Genome Browser custom track) |
| Alignm length: | 937 |
| Alignm identity: | 579 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 8-893 |
| Cow position: | chr3:46859056-46858124 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chr3:49908784-49907873 (view UCSC Genome Browser custom track) |
| Alignm length: | 927 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 62 |
| Conread position: | 8-893 |
| Cow position: | chr3:49998366-49999296 (view UCSC Genome Browser custom track) |
| Alignm length: | 942 |
| Alignm identity: | 584 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chr3:64652895-64653828 (view UCSC Genome Browser custom track) |
| Alignm length: | 941 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chr3:66969651-66968719 (view UCSC Genome Browser custom track) |
| Alignm length: | 941 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-893 |
| Cow position: | chr3:68697739-68696805 (view UCSC Genome Browser custom track) |
| Alignm length: | 943 |
| Alignm identity: | 601 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-893 |
| Cow position: | chr3:68718478-68717550 (view UCSC Genome Browser custom track) |
| Alignm length: | 939 |
| Alignm identity: | 583 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chr3:68871521-68870590 (view UCSC Genome Browser custom track) |
| Alignm length: | 948 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-921 |
| Cow position: | chr3:75039619-75038653 (view UCSC Genome Browser custom track) |
| Alignm length: | 974 |
| Alignm identity: | 602 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-921 |
| Cow position: | chr3:78025204-78024247 (view UCSC Genome Browser custom track) |
| Alignm length: | 969 |
| Alignm identity: | 589 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-933 |
| Cow position: | chr3:18813741-18814708 (view UCSC Genome Browser custom track) |
| Alignm length: | 979 |
| Alignm identity: | 605 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-935 |
| Cow position: | chr3:68890340-68889368 (view UCSC Genome Browser custom track) |
| Alignm length: | 983 |
| Alignm identity: | 610 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-942 |
| Cow position: | chr3:16885054-16884094 (view UCSC Genome Browser custom track) |
| Alignm length: | 983 |
| Alignm identity: | 612 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 62 |
| Conread position: | 11-222 |
| Cow position: | chr3:62913320-62913105 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 11-842 |
| Cow position: | chr3:83766484-83767361 (view UCSC Genome Browser custom track) |
| Alignm length: | 886 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 14-475 |
| Cow position: | chr3:6784644-6785130 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 14-881 |
| Cow position: | chr3:47079373-47078464 (view UCSC Genome Browser custom track) |
| Alignm length: | 925 |
| Alignm identity: | 577 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 14-893 |
| Cow position: | chr3:29574880-29573966 (view UCSC Genome Browser custom track) |
| Alignm length: | 931 |
| Alignm identity: | 579 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 110, 31 |
| Conread position: | 14-893 |
| Cow position: | chr3:48845237-48846165 (view UCSC Genome Browser custom track) |
| Alignm length: | 939 |
| Alignm identity: | 591 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 14-893 |
| Cow position: | chr3:49563244-49564176 (view UCSC Genome Browser custom track) |
| Alignm length: | 949 |
| Alignm identity: | 615 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 15-407 |
| Cow position: | chr3:53517835-53518240 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 106, 55 |
| Conread position: | 15-881 |
| Cow position: | chr3:45976738-45977651 (view UCSC Genome Browser custom track) |
| Alignm length: | 921 |
| Alignm identity: | 568 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 71, 53 |
| Conread position: | 15-883 |
| Cow position: | chr3:71513569-71512680 (view UCSC Genome Browser custom track) |
| Alignm length: | 917 |
| Alignm identity: | 566 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 15-885 |
| Cow position: | chr3:43191035-43190116 (view UCSC Genome Browser custom track) |
| Alignm length: | 927 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 16-376 |
| Cow position: | chr3:34875677-34876051 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 23-893 |
| Cow position: | chr3:57482477-57481577 (view UCSC Genome Browser custom track) |
| Alignm length: | 923 |
| Alignm identity: | 574 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 24-400 |
| Cow position: | chr3:82362876-82363272 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 39, 143 |
| Conread position: | 25-893 |
| Cow position: | chr3:6713256-6714167 (view UCSC Genome Browser custom track) |
| Alignm length: | 922 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 35-783 |
| Cow position: | chr3:56912134-56912878 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 36-929 |
| Cow position: | chr3:72670297-72669362 (view UCSC Genome Browser custom track) |
| Alignm length: | 942 |
| Alignm identity: | 562 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 38-562 |
| Cow position: | chr3:82350054-82350572 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 355 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 39-378 |
| Cow position: | chr3:1652569-1652242 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 169, 17 |
| Conread position: | 39-417 |
| Cow position: | chr3:62881624-62882019 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 43-411 |
| Cow position: | chr3:32491581-32491965 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 56-893 |
| Cow position: | chr3:19882752-19883630 (view UCSC Genome Browser custom track) |
| Alignm length: | 891 |
| Alignm identity: | 544 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 69-893 |
| Cow position: | chr3:24264489-24265358 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 542 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 18, 393 |
| Conread position: | 78-458 |
| Cow position: | chr3:21095969-21095592 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 92-925 |
| Cow position: | chr3:24573845-24572973 (view UCSC Genome Browser custom track) |
| Alignm length: | 891 |
| Alignm identity: | 553 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 64 |
| Conread position: | 117-562 |
| Cow position: | chr3:62837621-62837174 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 132-583 |
| Cow position: | chr3:77062614-77062141 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 135-407 |
| Cow position: | chr3:38491814-38492096 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 135-464 |
| Cow position: | chr3:2920606-2920957 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 245 |
| Conread position: | 136-790 |
| Cow position: | chr3:22085049-22084378 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 420 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 350 |
| Conread position: | 144-400 |
| Cow position: | chr3:15724356-15724612 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 149-400 |
| Cow position: | chr3:40121203-40121459 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 149-925 |
| Cow position: | chr3:25470420-25471191 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 500 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 158-617 |
| Cow position: | chr3:53647560-53647096 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 138 |
| Conread position: | 160-788 |
| Cow position: | chr3:12664323-12664984 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 426 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 160-881 |
| Cow position: | chr3:44926212-44926962 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 475 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 160-893 |
| Cow position: | chr3:49611822-49611048 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 496 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 48, 310 |
| Conread position: | 175-411 |
| Cow position: | chr3:26298615-26298369 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 203 |
| Conread position: | 175-946 |
| Cow position: | chr3:48995202-48995980 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 495 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 202-790 |
| Cow position: | chr3:43345808-43345196 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 403 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 208-945 |
| Cow position: | chr3:36171486-36170725 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 471 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 18, 124 |
| Conread position: | 230-557 |
| Cow position: | chr3:24534558-24534899 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 235-530 |
| Cow position: | chr3:7949906-7949615 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 237-507 |
| Cow position: | chr3:46127024-46126747 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 248-930 |
| Cow position: | chr3:60297757-60297076 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 457 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 255-601 |
| Cow position: | chr3:61249848-61250197 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 321-945 |
| Cow position: | chr3:21223151-21222500 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 415 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 212 |
| Conread position: | 400-885 |
| Cow position: | chr3:6837694-6838183 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 400-918 |
| Cow position: | chr3:60150485-60151014 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 350 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 485-941 |
| Cow position: | chr3:69442826-69442362 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 582-921 |
| Cow position: | chr3:19825196-19824855 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 192 |
| Conread position: | 587-945 |
| Cow position: | chr3:14881684-14881310 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 595-787 |
| Cow position: | chr3:16716997-16716801 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 595-945 |
| Cow position: | chr3:10038052-10038406 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 595-946 |
| Cow position: | chr3:60263256-60262905 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 596-867 |
| Cow position: | chr3:68402820-68402541 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 618-945 |
| Cow position: | chr3:56963551-56963225 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 112, 140 |
| Conread position: | 620-930 |
| Cow position: | chr3:8564178-8563864 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 128, 35 |
| Conread position: | 620-946 |
| Cow position: | chr3:322966-322652 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 621-930 |
| Cow position: | chr3:27222933-27223236 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 196, 87 |
| Conread position: | 621-945 |
| Cow position: | chr3:8098236-8098563 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 621-946 |
| Cow position: | chr3:51069019-51068687 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 145 |
| Conread position: | 626-866 |
| Cow position: | chr3:80307124-80307367 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 626-942 |
| Cow position: | chr3:19112085-19111765 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 182, 159 |
| Conread position: | 627-929 |
| Cow position: | chr3:44504656-44504347 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 628-790 |
| Cow position: | chr3:51848166-51848328 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 628-893 |
| Cow position: | chr3:67450747-67451010 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 216, 60 |
| Conread position: | 633-946 |
| Cow position: | chr3:27689369-27689684 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 196, 152 |
| Conread position: | 671-946 |
| Cow position: | chr3:29801737-29802023 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 210 |
| Conread position: | 676-945 |
| Cow position: | chr3:18195498-18195761 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 150, 23 |
Show alignments to all cow chromosomes.