Cow genome map

Conread name: Ss1.1-Pig4-TMW8053L10.5

Conread position: 1-327
Cow position:
Alignm length: 345
Alignm identity: 234
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 68

Conread position: 1-562
Cow position:
Alignm length: 594
Alignm identity: 388
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 47

Conread position: 2-410
Cow position:
Alignm length: 425
Alignm identity: 281
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 8, 67

Conread position: 2-411
Cow position:
Alignm length: 429
Alignm identity: 286
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 34

Conread position: 3-749
Cow position:
Alignm length: 785
Alignm identity: 492
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 132, 73

Conread position: 5-410
Cow position:
Alignm length: 425
Alignm identity: 276
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 7, 28

Conread position: 5-464
Cow position:
Alignm length: 488
Alignm identity: 315
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 119, 71

Conread position: 7-881
Cow position:
Alignm length: 927
Alignm identity: 560
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 117, 69

Conread position: 8-294
Cow position:
Alignm length: 300
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 62

Conread position: 8-297
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 28

Conread position: 8-353
Cow position:
Alignm length: 361
Alignm identity: 237
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 28

Conread position: 8-395
Cow position:
Alignm length: 402
Alignm identity: 261
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 60

Conread position: 8-400
Cow position:
Alignm length: 407
Alignm identity: 262
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 62

Conread position: 8-400
Cow position:
Alignm length: 411
Alignm identity: 265
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 28

Conread position: 8-400
Cow position:
Alignm length: 406
Alignm identity: 272
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 73, 138

Conread position: 8-411
Cow position:
Alignm length: 417
Alignm identity: 272
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 28

Conread position: 8-473
Cow position:
Alignm length: 497
Alignm identity: 324
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 60

Conread position: 8-475
Cow position:
Alignm length: 498
Alignm identity: 330
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 60

Conread position: 8-475
Cow position:
Alignm length: 496
Alignm identity: 324
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 28

Conread position: 8-475
Cow position:
Alignm length: 498
Alignm identity: 333
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 28

Conread position: 8-783
Cow position:
Alignm length: 828
Alignm identity: 512
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 28

Conread position: 8-788
Cow position:
Alignm length: 830
Alignm identity: 516
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 24, 28

Conread position: 8-829
Cow position:
Alignm length: 870
Alignm identity: 535
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 116, 34

Conread position: 8-830
Cow position:
Alignm length: 871
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 8-842
Cow position:
Alignm length: 887
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-867
Cow position:
Alignm length: 915
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-881
Cow position:
Alignm length: 927
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 68

Conread position: 8-881
Cow position:
Alignm length: 932
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 62

Conread position: 8-881
Cow position:
Alignm length: 936
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-881
Cow position:
Alignm length: 925
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-881
Cow position:
Alignm length: 931
Alignm identity: 570
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 48

Conread position: 8-881
Cow position:
Alignm length: 931
Alignm identity: 574
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 116, 60

Conread position: 8-882
Cow position:
Alignm length: 936
Alignm identity: 576
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 62

Conread position: 8-883
Cow position:
Alignm length: 931
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-885
Cow position:
Alignm length: 927
Alignm identity: 563
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 116, 34

Conread position: 8-893
Cow position:
Alignm length: 946
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 937
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 24

Conread position: 8-893
Cow position:
Alignm length: 943
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 958
Alignm identity: 606
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 79, 68

Conread position: 8-893
Cow position:
Alignm length: 947
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position:
Alignm length: 942
Alignm identity: 585
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 74, 527

Conread position: 8-893
Cow position:
Alignm length: 937
Alignm identity: 579
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 69

Conread position: 8-893
Cow position:
Alignm length: 940
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 927
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 62

Conread position: 8-893
Cow position:
Alignm length: 942
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 941
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 941
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position:
Alignm length: 943
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position:
Alignm length: 939
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position:
Alignm length: 948
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-921
Cow position:
Alignm length: 974
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-921
Cow position:
Alignm length: 969
Alignm identity: 589
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 79, 62

Conread position: 8-933
Cow position:
Alignm length: 979
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 62

Conread position: 8-935
Cow position:
Alignm length: 983
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-942
Cow position:
Alignm length: 983
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 62

Conread position: 11-222
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 58

Conread position: 11-842
Cow position:
Alignm length: 886
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 25

Conread position: 14-475
Cow position:
Alignm length: 488
Alignm identity: 316
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 73, 49

Conread position: 14-881
Cow position:
Alignm length: 925
Alignm identity: 577
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 110, 54

Conread position: 14-893
Cow position:
Alignm length: 931
Alignm identity: 579
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 110, 31

Conread position: 14-893
Cow position:
Alignm length: 939
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 22

Conread position: 14-893
Cow position:
Alignm length: 949
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 54

Conread position: 15-407
Cow position:
Alignm length: 411
Alignm identity: 264
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 106, 55

Conread position: 15-881
Cow position:
Alignm length: 921
Alignm identity: 568
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 53

Conread position: 15-883
Cow position:
Alignm length: 917
Alignm identity: 566
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 106, 62

Conread position: 15-885
Cow position:
Alignm length: 927
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 55

Conread position: 16-376
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 26

Conread position: 23-893
Cow position:
Alignm length: 923
Alignm identity: 574
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 53

Conread position: 24-400
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 39, 143

Conread position: 25-893
Cow position:
Alignm length: 922
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 35-783
Cow position:
Alignm length: 771
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 28

Conread position: 36-929
Cow position:
Alignm length: 942
Alignm identity: 562
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 34

Conread position: 38-562
Cow position:
Alignm length: 544
Alignm identity: 355
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 33

Conread position: 39-378
Cow position:
Alignm length: 342
Alignm identity: 226
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 169, 17

Conread position: 39-417
Cow position:
Alignm length: 400
Alignm identity: 260
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 32

Conread position: 43-411
Cow position:
Alignm length: 387
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 27

Conread position: 56-893
Cow position:
Alignm length: 891
Alignm identity: 544
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 14

Conread position: 69-893
Cow position:
Alignm length: 878
Alignm identity: 542
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 18, 393

Conread position: 78-458
Cow position:
Alignm length: 393
Alignm identity: 255
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 10

Conread position: 92-925
Cow position:
Alignm length: 891
Alignm identity: 553
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 64

Conread position: 117-562
Cow position:
Alignm length: 463
Alignm identity: 296
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 49

Conread position: 132-583
Cow position:
Alignm length: 482
Alignm identity: 325
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 45

Conread position: 135-407
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 42

Conread position: 135-464
Cow position:
Alignm length: 353
Alignm identity: 235
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 245

Conread position: 136-790
Cow position:
Alignm length: 681
Alignm identity: 420
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 350

Conread position: 144-400
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 87, 17

Conread position: 149-400
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 12

Conread position: 149-925
Cow position:
Alignm length: 805
Alignm identity: 500
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 14

Conread position: 158-617
Cow position:
Alignm length: 480
Alignm identity: 307
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 138

Conread position: 160-788
Cow position:
Alignm length: 674
Alignm identity: 426
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 83

Conread position: 160-881
Cow position:
Alignm length: 762
Alignm identity: 475
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 83

Conread position: 160-893
Cow position:
Alignm length: 787
Alignm identity: 496
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 48, 310

Conread position: 175-411
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 203

Conread position: 175-946
Cow position:
Alignm length: 805
Alignm identity: 495
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 90

Conread position: 202-790
Cow position:
Alignm length: 630
Alignm identity: 403
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 75

Conread position: 208-945
Cow position:
Alignm length: 770
Alignm identity: 471
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 18, 124

Conread position: 230-557
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 136

Conread position: 235-530
Cow position:
Alignm length: 304
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 75

Conread position: 237-507
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 38

Conread position: 248-930
Cow position:
Alignm length: 713
Alignm identity: 457
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 54, 26

Conread position: 255-601
Cow position:
Alignm length: 362
Alignm identity: 234
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 127

Conread position: 321-945
Cow position:
Alignm length: 663
Alignm identity: 415
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 212

Conread position: 400-885
Cow position:
Alignm length: 510
Alignm identity: 323
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 82

Conread position: 400-918
Cow position:
Alignm length: 550
Alignm identity: 350
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 67

Conread position: 485-941
Cow position:
Alignm length: 476
Alignm identity: 308
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 10

Conread position: 582-921
Cow position:
Alignm length: 348
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 192

Conread position: 587-945
Cow position:
Alignm length: 377
Alignm identity: 243
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 139

Conread position: 595-787
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 96

Conread position: 595-945
Cow position:
Alignm length: 362
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 170

Conread position: 595-946
Cow position:
Alignm length: 361
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 56

Conread position: 596-867
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 146

Conread position: 618-945
Cow position:
Alignm length: 335
Alignm identity: 220
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 112, 140

Conread position: 620-930
Cow position:
Alignm length: 319
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 128, 35

Conread position: 620-946
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 621-930
Cow position:
Alignm length: 311
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 196, 87

Conread position: 621-945
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 40

Conread position: 621-946
Cow position:
Alignm length: 336
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 145

Conread position: 626-866
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 60

Conread position: 626-942
Cow position:
Alignm length: 324
Alignm identity: 216
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 182, 159

Conread position: 627-929
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 185, 0

Conread position: 628-790
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 628-893
Cow position:
Alignm length: 269
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 216, 60

Conread position: 633-946
Cow position:
Alignm length: 320
Alignm identity: 206
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 196, 152

Conread position: 671-946
Cow position:
Alignm length: 288
Alignm identity: 186
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 210

Conread position: 676-945
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 150, 23

Show alignments to all cow chromosomes.