Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               284
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               83, 67
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               359
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 55
               

               Conread position:
               2-410
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               81, 66
               

               Conread position:
               2-465
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               85, 61
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               340
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 66
               

               Conread position:
               2-783
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               494
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               2-896
               

               Cow position:
               
               

               Alignm length:
               948
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 34
               

               Conread position:
               3-475
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               335
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               29, 33
               

               Conread position:
               5-896
               

               Cow position:
               
               

               Alignm length:
               952
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 72
               

               Conread position:
               6-943
               

               Cow position:
               
               

               Alignm length:
               978
               

               Alignm identity:
               573
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 47
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               116, 60
               

               Conread position:
               8-319
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-320
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 62
               

               Conread position:
               8-339
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-359
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-465
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               8-524
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-555
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               380
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-783
               

               Cow position:
               
               

               Alignm length:
               823
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               8-788
               

               Cow position:
               
               

               Alignm length:
               829
               

               Alignm identity:
               518
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-788
               

               Cow position:
               
               

               Alignm length:
               826
               

               Alignm identity:
               512
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-836
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 68
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               933
               

               Alignm identity:
               569
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               927
               

               Alignm identity:
               558
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               929
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               8-883
               

               Cow position:
               
               

               Alignm length:
               929
               

               Alignm identity:
               584
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-883
               

               Cow position:
               
               

               Alignm length:
               929
               

               Alignm identity:
               565
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-885
               

               Cow position:
               
               

               Alignm length:
               931
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               596
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               948
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               590
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               947
               

               Alignm identity:
               599
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 48
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               947
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               974
               

               Alignm identity:
               601
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               113, 60
               

               Conread position:
               9-475
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               322
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               75, 14
               

               Conread position:
               9-926
               

               Cow position:
               
               

               Alignm length:
               961
               

               Alignm identity:
               596
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               11-359
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               11-397
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               14-400
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               15-409
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               72, 52
               

               Conread position:
               15-410
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 50
               

               Conread position:
               15-464
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               106, 141
               

               Conread position:
               15-881
               

               Cow position:
               
               

               Alignm length:
               918
               

               Alignm identity:
               568
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               16-415
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               17-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               17-871
               

               Cow position:
               
               

               Alignm length:
               890
               

               Alignm identity:
               558
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               19-560
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               354
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               195, 23
               

               Conread position:
               23-893
               

               Cow position:
               
               

               Alignm length:
               932
               

               Alignm identity:
               578
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               101, 48
               

               Conread position:
               26-817
               

               Cow position:
               
               

               Alignm length:
               815
               

               Alignm identity:
               498
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 7
               

               Conread position:
               38-921
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               584
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               39-848
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               524
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               60-411
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               69-893
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               546
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               18, 316
               

               Conread position:
               70-783
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               455
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               135-938
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               533
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 161
               

               Conread position:
               149-410
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               149-930
               

               Cow position:
               
               

               Alignm length:
               845
               

               Alignm identity:
               537
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               59, 12
               

               Conread position:
               160-842
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               441
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               161-411
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               47, 217
               

               Conread position:
               168-893
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               484
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 209
               

               Conread position:
               175-893
               

               Cow position:
               
               

               Alignm length:
               768
               

               Alignm identity:
               481
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               192-474
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               194-788
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               400
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 116
               

               Conread position:
               202-879
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               460
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 174
               

               Conread position:
               218-936
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               470
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               231-541
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               155, 24
               

               Conread position:
               241-541
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               207, 145
               

               Conread position:
               278-730
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               300
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 179
               

               Conread position:
               284-555
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               94, 196
               

               Conread position:
               309-926
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               387
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               311-886
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               381
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 170
               

               Conread position:
               400-929
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               346
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               425-941
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               345
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               550-911
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               22, 104
               

               Conread position:
               564-881
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               568-881
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               568-881
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               588-933
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               595-933
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               618-941
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 87
               

               Conread position:
               628-945
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               628-945
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               201, 24
               

               Conread position:
               656-946
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               132, 73
               

               Conread position:
               679-922
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               702-946
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               79, 101
               
Show alignments to all cow chromosomes.