Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 64
               

               Conread position:
               1-941
               

               Cow position:
               
               

               Alignm length:
               971
               

               Alignm identity:
               594
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               134, 55
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               85, 61
               

               Conread position:
               3-340
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 153
               

               Conread position:
               7-407
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               60, 113
               

               Conread position:
               8-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               72, 167
               

               Conread position:
               8-347
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-366
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-409
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               116, 60
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-475
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-537
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               368
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-537
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               367
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-540
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-590
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               392
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               8-620
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-743
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               483
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               8-842
               

               Cow position:
               
               

               Alignm length:
               887
               

               Alignm identity:
               551
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-868
               

               Cow position:
               
               

               Alignm length:
               917
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-879
               

               Cow position:
               
               

               Alignm length:
               924
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               936
               

               Alignm identity:
               574
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               24, 165
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               572
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               78, 59
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               576
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               904
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-885
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-885
               

               Cow position:
               
               

               Alignm length:
               933
               

               Alignm identity:
               574
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               113, 68
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               937
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               932
               

               Alignm identity:
               584
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               604
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               938
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               950
               

               Alignm identity:
               604
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               937
               

               Alignm identity:
               580
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               946
               

               Alignm identity:
               609
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               938
               

               Alignm identity:
               597
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               599
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               959
               

               Alignm identity:
               588
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               969
               

               Alignm identity:
               585
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               79, 68
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               969
               

               Alignm identity:
               602
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-929
               

               Cow position:
               
               

               Alignm length:
               976
               

               Alignm identity:
               608
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               8-930
               

               Cow position:
               
               

               Alignm length:
               967
               

               Alignm identity:
               589
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               105, 60
               

               Conread position:
               8-933
               

               Cow position:
               
               

               Alignm length:
               981
               

               Alignm identity:
               604
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               11-472
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-883
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               584
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               927
               

               Alignm identity:
               568
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               934
               

               Alignm identity:
               578
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               938
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 65
               

               Conread position:
               13-411
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               14-555
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               366
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               14-881
               

               Cow position:
               
               

               Alignm length:
               924
               

               Alignm identity:
               571
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               14-881
               

               Cow position:
               
               

               Alignm length:
               915
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 143
               

               Conread position:
               14-893
               

               Cow position:
               
               

               Alignm length:
               935
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               14-893
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               600
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               15-465
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               304
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               15-544
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               334
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 51
               

               Conread position:
               15-881
               

               Cow position:
               
               

               Alignm length:
               925
               

               Alignm identity:
               577
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               55, 75
               

               Conread position:
               15-921
               

               Cow position:
               
               

               Alignm length:
               960
               

               Alignm identity:
               595
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               109, 52
               

               Conread position:
               15-933
               

               Cow position:
               
               

               Alignm length:
               982
               

               Alignm identity:
               611
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               15-946
               

               Cow position:
               
               

               Alignm length:
               996
               

               Alignm identity:
               619
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               16-946
               

               Cow position:
               
               

               Alignm length:
               992
               

               Alignm identity:
               605
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               17-447
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               292
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               19-410
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               5, 45
               

               Conread position:
               20-886
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               577
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 7
               

               Conread position:
               23-464
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               23-475
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               60-788
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               474
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               62-880
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 481
               

               Conread position:
               81-735
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               432
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               86-411
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 297
               

               Conread position:
               131-828
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               478
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               26, 249
               

               Conread position:
               135-475
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 246
               

               Conread position:
               149-388
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               158-943
               

               Cow position:
               
               

               Alignm length:
               832
               

               Alignm identity:
               503
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 107
               

               Conread position:
               160-900
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               480
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               48, 359
               

               Conread position:
               190-893
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               468
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 129
               

               Conread position:
               201-555
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               112, 46
               

               Conread position:
               207-893
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               456
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               25, 330
               

               Conread position:
               230-592
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               151, 18
               

               Conread position:
               248-561
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 139
               

               Conread position:
               255-942
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               444
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               494-945
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               312
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               71, 33
               

               Conread position:
               618-926
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               155, 118
               

               Conread position:
               618-937
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               172, 145
               

               Conread position:
               619-943
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               5, 123
               

               Conread position:
               621-946
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               622-933
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               207, 145
               

               Conread position:
               622-941
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               622-946
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               215, 141
               

               Conread position:
               626-945
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               176, 54
               

               Conread position:
               677-914
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               140, 205
               
Show alignments to all cow chromosomes.