Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053L10.5
        

               Conread position:
               2-400
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               2-406
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               79, 316
               

               Conread position:
               2-410
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               2-787
               

               Cow position:
               
               

               Alignm length:
               835
               

               Alignm identity:
               514
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 34
               

               Conread position:
               2-893
               

               Cow position:
               
               

               Alignm length:
               934
               

               Alignm identity:
               574
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               88, 60
               

               Conread position:
               2-893
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               596
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 68
               

               Conread position:
               8-251
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-360
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               8-363
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               127, 60
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 60
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-457
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-485
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               83, 163
               

               Conread position:
               8-544
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               350
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               8-555
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               365
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-788
               

               Cow position:
               
               

               Alignm length:
               826
               

               Alignm identity:
               516
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               79, 55
               

               Conread position:
               8-831
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-868
               

               Cow position:
               
               

               Alignm length:
               916
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               929
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               923
               

               Alignm identity:
               571
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               920
               

               Alignm identity:
               570
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               79, 68
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               925
               

               Alignm identity:
               574
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-881
               

               Cow position:
               
               

               Alignm length:
               934
               

               Alignm identity:
               588
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               116, 60
               

               Conread position:
               8-892
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               583
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               582
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               951
               

               Alignm identity:
               603
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               594
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               944
               

               Alignm identity:
               599
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               944
               

               Alignm identity:
               587
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               925
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               938
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               937
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               937
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-893
               

               Cow position:
               
               

               Alignm length:
               942
               

               Alignm identity:
               594
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               8-899
               

               Cow position:
               
               

               Alignm length:
               946
               

               Alignm identity:
               577
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               8-921
               

               Cow position:
               
               

               Alignm length:
               967
               

               Alignm identity:
               585
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               8-941
               

               Cow position:
               
               

               Alignm length:
               986
               

               Alignm identity:
               623
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 203
               

               Conread position:
               9-385
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               131, 20
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               113, 65
               

               Conread position:
               11-893
               

               Cow position:
               
               

               Alignm length:
               938
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               14-881
               

               Cow position:
               
               

               Alignm length:
               922
               

               Alignm identity:
               567
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               15-379
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               117, 27
               

               Conread position:
               15-397
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               15-415
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               15-783
               

               Cow position:
               
               

               Alignm length:
               800
               

               Alignm identity:
               491
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               15-885
               

               Cow position:
               
               

               Alignm length:
               927
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 36
               

               Conread position:
               16-378
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               16-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               70, 54
               

               Conread position:
               16-406
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 52
               

               Conread position:
               16-410
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               108, 26
               

               Conread position:
               17-893
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               601
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 51
               

               Conread position:
               23-881
               

               Cow position:
               
               

               Alignm length:
               912
               

               Alignm identity:
               558
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               23-893
               

               Cow position:
               
               

               Alignm length:
               925
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               24-407
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               24-461
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               107, 52
               

               Conread position:
               24-881
               

               Cow position:
               
               

               Alignm length:
               910
               

               Alignm identity:
               557
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               25-406
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               25-410
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               25-783
               

               Cow position:
               
               

               Alignm length:
               808
               

               Alignm identity:
               507
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               25-922
               

               Cow position:
               
               

               Alignm length:
               957
               

               Alignm identity:
               597
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               30-832
               

               Cow position:
               
               

               Alignm length:
               845
               

               Alignm identity:
               519
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               54, 38
               

               Conread position:
               46-893
               

               Cow position:
               
               

               Alignm length:
               906
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 432
               

               Conread position:
               70-757
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               445
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 244
               

               Conread position:
               86-475
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               274
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               38, 297
               

               Conread position:
               119-464
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               135-883
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               501
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               158-476
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               160-555
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 83
               

               Conread position:
               179-783
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               398
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               190-881
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               437
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               26, 305
               

               Conread position:
               226-445
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               244-929
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               439
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               62, 140
               

               Conread position:
               270-883
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               405
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               113, 177
               

               Conread position:
               344-698
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 187
               

               Conread position:
               436-903
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               308
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               18, 284
               

               Conread position:
               468-804
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               488-946
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 32
               

               Conread position:
               591-946
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               226, 31
               

               Conread position:
               595-942
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 227
               

               Conread position:
               595-945
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               618-934
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               169, 42
               

               Conread position:
               618-943
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 47
               

               Conread position:
               621-843
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               106, 193
               

               Conread position:
               621-926
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               622-941
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 165
               

               Conread position:
               623-946
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               48, 26
               

               Conread position:
               626-920
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 110
               

               Conread position:
               626-942
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               200, 159
               

               Conread position:
               628-789
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               628-921
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               100, 109
               

               Conread position:
               643-943
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               184, 150
               

               Conread position:
               656-925
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 25
               

               Conread position:
               666-941
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 147
               

               Conread position:
               679-945
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               150, 196
               
Show alignments to all cow chromosomes.